RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 CEP170BQ9Y4F5 1589 aaPredicted RBP14.06□□□□□ -0.16
UBE2D3-209ENST00000394804 HSP90AB2PQ58FF8 381 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 ACEP12821 1306 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 FSD2A1L4K1 749 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 LETM1O95202 739 aaPredicted RBP14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 MYO3AQ8NEV4 1616 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 TMEM2Q9UHN6 1383 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 SRGAP3O43295 1099 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 NRDCO43847 1150 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 DDX58O95786 925 aaKnown RBP14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 ZSCAN23Q3MJ62 389 aa14.05□□□□□ -0.16
UBE2D3-209ENST00000394804 LMTK3Q96Q04 1460 aa14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 FIBPO43427 364 aa14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 NEXNQ0ZGT2 675 aa14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 IQSEC2Q5JU85 1478 aa14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 MAP4K4O95819 1239 aaPredicted RBP14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 MAP7D2Q96T17 732 aa14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 LRRFIP2Q9Y608 721 aaKnown RBP14.04□□□□□ -0.16
UBE2D3-209ENST00000394804 NUTM1Q86Y26 1132 aa14.03□□□□□ -0.16
UBE2D3-209ENST00000394804 TMX3Q96JJ7 454 aa14.03□□□□□ -0.16
UBE2D3-209ENST00000394804 KIF24Q5T7B8 1368 aa14.03□□□□□ -0.16
UBE2D3-209ENST00000394804 RAB11FIP3O75154 756 aa14.03□□□□□ -0.16
UBE2D3-209ENST00000394804 TSHZ3Q63HK5 1081 aa14.03□□□□□ -0.16
UBE2D3-209ENST00000394804 KIF3AQ9Y496 699 aa14.03□□□□□ -0.16
UBE2D3-209ENST00000394804 KIF1BPQ96EK5 621 aa14.02□□□□□ -0.16
UBE2D3-209ENST00000394804 CHMP3Q9Y3E7 222 aa14.02□□□□□ -0.16
UBE2D3-209ENST00000394804 MSH6P52701 1360 aa14.02□□□□□ -0.16
UBE2D3-209ENST00000394804 OTUD7AQ8TE49 926 aaPredicted RBP14.02□□□□□ -0.17
UBE2D3-209ENST00000394804 H3BQV1 296 aa14.02□□□□□ -0.17
UBE2D3-209ENST00000394804 IFFO2Q5TF58 517 aa14.02□□□□□ -0.17
UBE2D3-209ENST00000394804 RBM27Q9P2N5 1060 aaKnown RBP14.02□□□□□ -0.17
UBE2D3-209ENST00000394804 PSME1Q06323 249 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 TAF7Q15545 349 aaPredicted RBP14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 ERC1Q8IUD2 1116 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 FAM184AQ8NB25 1140 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 ESYT1Q9BSJ8 1104 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 GSPT1P15170 499 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 CHL1O00533 1208 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 PSMA5P28066 241 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 ZGPATQ8N5A5 531 aaKnown RBP14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 CYP46A1Q9Y6A2 500 aa14.01□□□□□ -0.17
UBE2D3-209ENST00000394804 ANAPC15P60006 121 aa14□□□□□ -0.17
UBE2D3-209ENST00000394804 CWC27Q6UX04 472 aaKnown RBP14□□□□□ -0.17
UBE2D3-209ENST00000394804 MTERF4Q7Z6M4 381 aaKnown RBP14□□□□□ -0.17
UBE2D3-209ENST00000394804 RBM33Q96EV2 1170 aaKnown RBP14□□□□□ -0.17
UBE2D3-209ENST00000394804 NRXN1Q9ULB1 1477 aa14□□□□□ -0.17
UBE2D3-209ENST00000394804 HIP1O00291 1037 aa14□□□□□ -0.17
UBE2D3-209ENST00000394804 PDCP20941 246 aa14□□□□□ -0.17
UBE2D3-209ENST00000394804 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
UBE2D3-209ENST00000394804 FAM135BQ49AJ0 1406 aa13.99□□□□□ -0.17
UBE2D3-209ENST00000394804 TULP4Q9NRJ4 1543 aa13.99□□□□□ -0.17
UBE2D3-209ENST00000394804 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
UBE2D3-209ENST00000394804 LRSAM1Q6UWE0 723 aa13.99□□□□□ -0.17
UBE2D3-209ENST00000394804 BICD2Q8TD16 824 aa13.99□□□□□ -0.17
UBE2D3-209ENST00000394804 GLRX3O76003 335 aaKnown RBP13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 FSD1Q9BTV5 496 aa13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 MYO5BQ9ULV0 1848 aa13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 ATP7BP35670 1465 aa13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 TAOK2Q9UL54 1235 aa13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 PIK3R4Q99570 1358 aa13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 RBM10P98175 930 aaKnown RBP13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 ZNF530Q6P9A1 599 aaPredicted RBP13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 TMEM131LA2VDJ0 1609 aa13.98□□□□□ -0.17
UBE2D3-209ENST00000394804 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 ATP8B2P98198 1209 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 AIMP1Q12904 312 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 MTHFSDQ2M296 383 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 PTCH1Q13635 1447 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 TTC21AQ8NDW8 1320 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 MYOM1P52179 1685 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 ZNF853P0CG23 659 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 ZSCAN31Q96LW9 406 aaPredicted RBP13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 JAKMIP1Q96N16 626 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 PRIM1P49642 420 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 RIC3Q7Z5B4 369 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 UQCRHLA0A096LP55 91 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 CD2BP2O95400 341 aaKnown RBP13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 TPM3P06753 285 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 UQCRHP07919 91 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 UBR1Q8IWV7 1749 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 SIRT2Q8IXJ6 389 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 PDRG1Q9NUG6 133 aa13.97□□□□□ -0.17
UBE2D3-209ENST00000394804 AATKQ6ZMQ8 1374 aa13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 KIAA0232Q92628 1395 aa13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 CASTP20810 708 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 MCM5P33992 734 aa13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 XPCQ01831 940 aaPredicted RBP13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 GDPD2Q9HCC8 539 aa13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 AMOTL2Q9Y2J4 779 aa13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 HMGN5P82970 282 aaKnown RBP13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 CCDC183Q5T5S1 534 aa13.96□□□□□ -0.17
UBE2D3-209ENST00000394804 MED14O60244 1454 aa13.96□□□□□ -0.18
UBE2D3-209ENST00000394804 FOXO3O43524 673 aa13.96□□□□□ -0.18
UBE2D3-209ENST00000394804 ZNF445P59923 1031 aa13.96□□□□□ -0.18
UBE2D3-209ENST00000394804 MPNDQ8N594 471 aa13.96□□□□□ -0.18
UBE2D3-209ENST00000394804 LIMCH1Q9UPQ0 1083 aa13.96□□□□□ -0.18
UBE2D3-209ENST00000394804 G2E3Q7L622 706 aa13.95□□□□□ -0.18
UBE2D3-209ENST00000394804 PPP1R42Q7Z4L9 355 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms