RNA–Protein interactions for RNA: ENST00000394686.3

SGMS2-203, Transcript of sphingomyelin synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS2, Length 2,127 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS2-203ENST00000394686 LNPKQ9C0E8 428 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 MYH16Q9H6N6 1097 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 DENND4BO75064 1496 aaPredicted RBP8.33□□□□□ -1.08
SGMS2-203ENST00000394686 ZMYM3Q14202 1370 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 RAD51AP2Q09MP3 1159 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 DPYDQ12882 1025 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 SF3A1Q15459 793 aaKnown RBP8.33□□□□□ -1.08
SGMS2-203ENST00000394686 ECM1Q16610 540 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 GAS2L2Q8NHY3 880 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 L3MBTL2Q969R5 705 aa8.33□□□□□ -1.08
SGMS2-203ENST00000394686 ZC3H4Q9UPT8 1303 aaKnown RBP8.33□□□□□ -1.08
SGMS2-203ENST00000394686 KDM4FA0A1W2PPD8 638 aa8.32□□□□□ -1.08
SGMS2-203ENST00000394686 SLF2Q8IX21 1173 aa8.32□□□□□ -1.08
SGMS2-203ENST00000394686 PRIMPOLQ96LW4 560 aa8.32□□□□□ -1.08
SGMS2-203ENST00000394686 ABCA9Q8IUA7 1624 aa8.32□□□□□ -1.08
SGMS2-203ENST00000394686 MARCH6O60337 910 aa8.32□□□□□ -1.08
SGMS2-203ENST00000394686 UTP14CQ5TAP6 766 aaKnown RBP8.32□□□□□ -1.08
SGMS2-203ENST00000394686 GPATCH3Q96I76 525 aa8.32□□□□□ -1.08
SGMS2-203ENST00000394686 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.32□□□□□ -1.08
SGMS2-203ENST00000394686 IQSEC3Q9UPP2 1182 aaPredicted RBP8.32□□□□□ -1.08
SGMS2-203ENST00000394686 TCOF1Q13428 1488 aaKnown RBP8.31□□□□□ -1.08
SGMS2-203ENST00000394686 SUPT6HQ7KZ85 1726 aaKnown RBP8.31□□□□□ -1.08
SGMS2-203ENST00000394686 CFAP74Q9C0B2 1584 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 FHOD3Q2V2M9 1422 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 SCAPERQ9BY12 1400 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 PTMSP20962 102 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 CLDN10P78369 228 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 ZDHHC16Q969W1 377 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 TRIM44Q96DX7 344 aaPredicted RBP8.31□□□□□ -1.08
SGMS2-203ENST00000394686 CRBNQ96SW2 442 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 TANGO6Q9C0B7 1094 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 ANTXR1Q9H6X2 564 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
SGMS2-203ENST00000394686 EIF3AQ14152 1382 aaKnown RBP8.31□□□□□ -1.08
SGMS2-203ENST00000394686 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.3□□□□□ -1.08
SGMS2-203ENST00000394686 ANKMY2Q8IV38 441 aa8.3□□□□□ -1.08
SGMS2-203ENST00000394686 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.3□□□□□ -1.08
SGMS2-203ENST00000394686 SEPT3Q9UH03 358 aa8.3□□□□□ -1.08
SGMS2-203ENST00000394686 NUP153P49790 1475 aaKnown RBP8.3□□□□□ -1.08
SGMS2-203ENST00000394686 SLC34A2O95436 690 aa8.3□□□□□ -1.08
SGMS2-203ENST00000394686 SLC10A3P09131 477 aa8.3□□□□□ -1.08
SGMS2-203ENST00000394686 DNAJB2P25686 324 aa8.3□□□□□ -1.08
SGMS2-203ENST00000394686 GCGRP47871 477 aa8.3□□□□□ -1.08
SGMS2-203ENST00000394686 E9PCH4 1651 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 MAGI3Q5TCQ9 1506 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 HAX1O00165 279 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 MCM4P33991 863 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 KHSRPQ92945 711 aaKnown RBP eCLIP8.29□□□□□ -1.08
SGMS2-203ENST00000394686 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 KIAA1024Q9UPX6 916 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 KIF14Q15058 1648 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 ANKRD30BQ9BXX2 1392 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 BCORL1Q5H9F3 1711 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 EHBP1L1Q8N3D4 1523 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 KDM5CP41229 1560 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 RAB11FIP3O75154 756 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 OFD1O75665 1012 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 NOL8Q76FK4 1167 aaKnown RBP8.29□□□□□ -1.08
SGMS2-203ENST00000394686 NT5DC4Q86YG4 428 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 GLYCTKQ8IVS8 523 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 GRPEL1Q9HAV7 217 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
SGMS2-203ENST00000394686 MAPK8IP3Q9UPT6 1336 aa8.29□□□□□ -1.08
SGMS2-203ENST00000394686 ATP10BO94823 1461 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 A0A0U1RQG5 324 aaPredicted RBP8.28□□□□□ -1.08
SGMS2-203ENST00000394686 TNNI2P48788 182 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 ARHGAP4P98171 946 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 NR1H3Q13133 447 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 LARP1Q6PKG0 1096 aaKnown RBP8.28□□□□□ -1.08
SGMS2-203ENST00000394686 MPHOSPH9Q99550 1183 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 SBNO2Q9Y2G9 1366 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 BLMP54132 1417 aaPredicted RBP8.28□□□□□ -1.08
SGMS2-203ENST00000394686 MBD5Q9P267 1494 aa8.28□□□□□ -1.08
SGMS2-203ENST00000394686 MRPL58Q14197 206 aaKnown RBP8.27□□□□□ -1.08
SGMS2-203ENST00000394686 OCLNQ16625 522 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 NBPF8Q3BBV2 869 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 SLFNL1Q499Z3 407 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 NLRP13Q86W25 1043 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 OGFOD1Q8N543 542 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 ASB16Q96NS5 453 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 PIF1Q9H611 641 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 PNMA3Q9UL41 463 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 USP19O94966 1318 aa8.27□□□□□ -1.08
SGMS2-203ENST00000394686 MYO5CQ9NQX4 1742 aa8.27□□□□□ -1.09
SGMS2-203ENST00000394686 KIAA1211Q6ZU35 1233 aa8.27□□□□□ -1.09
SGMS2-203ENST00000394686 PLEKHM2Q8IWE5 1019 aa8.27□□□□□ -1.09
SGMS2-203ENST00000394686 MICAL1Q8TDZ2 1067 aa8.27□□□□□ -1.09
SGMS2-203ENST00000394686 VTI1AQ96AJ9 217 aa8.27□□□□□ -1.09
SGMS2-203ENST00000394686 MTUS2Q5JR59 1369 aa8.27□□□□□ -1.09
SGMS2-203ENST00000394686 ICMTO60725 284 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 P4HBP07237 508 aaKnown RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 PLCG2P16885 1265 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 GTF2F1P35269 517 aaKnown RBP eCLIP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 CCDC173Q0VFZ6 552 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 CCDC144BQ3MJ40 725 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 HS1BP3Q53T59 392 aa8.26□□□□□ -1.09
SGMS2-203ENST00000394686 METTL16Q86W50 562 aaKnown RBP8.26□□□□□ -1.09
SGMS2-203ENST00000394686 LRRIQ1Q96JM4 1722 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms