RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	MYT1	Q01538	1121 aa		11.65	□□□□□ -0.54
MITF-205	ENST00000394348	AMOT	Q4VCS5	1084 aa		11.65	□□□□□ -0.54
MITF-205	ENST00000394348	GCC1	Q96CN9	775 aa		11.65	□□□□□ -0.54
MITF-205	ENST00000394348	RBM33	Q96EV2	1170 aa	Known RBP	11.65	□□□□□ -0.54
MITF-205	ENST00000394348	TNS3	Q68CZ2	1445 aa		11.65	□□□□□ -0.54
MITF-205	ENST00000394348	CRYBG1	Q9Y4K1	1723 aa		11.65	□□□□□ -0.54
MITF-205	ENST00000394348	ADAMTS7	Q9UKP4	1686 aa		11.65	□□□□□ -0.55
MITF-205	ENST00000394348	PXDNL	A1KZ92	1463 aa		11.64	□□□□□ -0.55
MITF-205	ENST00000394348	PLEKHG5	O94827	1062 aa		11.64	□□□□□ -0.55
MITF-205	ENST00000394348	MNX1	P50219	401 aa	Predicted RBP	11.64	□□□□□ -0.55
MITF-205	ENST00000394348	ERICH6	Q7L0X2	663 aa		11.64	□□□□□ -0.55
MITF-205	ENST00000394348	NOP58	Q9Y2X3	529 aa	Known RBP	11.64	□□□□□ -0.55
MITF-205	ENST00000394348	XIRP1	Q702N8	1843 aa	Known RBP	11.64	□□□□□ -0.55
MITF-205	ENST00000394348	STRC	Q7RTU9	1775 aa		11.64	□□□□□ -0.55
MITF-205	ENST00000394348	PXDN	Q92626	1479 aa		11.63	□□□□□ -0.55
MITF-205	ENST00000394348	HOXB7	P09629	217 aa		11.63	□□□□□ -0.55
MITF-205	ENST00000394348	TAF7	Q15545	349 aa	Predicted RBP	11.63	□□□□□ -0.55
MITF-205	ENST00000394348	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.63	□□□□□ -0.55
MITF-205	ENST00000394348	SKAP1	Q86WV1	359 aa		11.63	□□□□□ -0.55
MITF-205	ENST00000394348	RGPD2	P0DJD1	1756 aa		11.62	□□□□□ -0.55
MITF-205	ENST00000394348	COL18A1	P39060	1754 aa		11.62	□□□□□ -0.55
MITF-205	ENST00000394348	ELL2	O00472	640 aa	Predicted RBP	11.62	□□□□□ -0.55
MITF-205	ENST00000394348	AKAP4	Q5JQC9	854 aa		11.62	□□□□□ -0.55
MITF-205	ENST00000394348	NBPF6	Q5VWK0	638 aa		11.62	□□□□□ -0.55
MITF-205	ENST00000394348	NBPF4	Q96M43	638 aa		11.62	□□□□□ -0.55
MITF-205	ENST00000394348	C19orf67	A6NJJ6	358 aa		11.61	□□□□□ -0.55
MITF-205	ENST00000394348	VASP	P50552	380 aa	Predicted RBP	11.61	□□□□□ -0.55
MITF-205	ENST00000394348	NUCB1	Q02818	461 aa		11.61	□□□□□ -0.55
MITF-205	ENST00000394348	CCDC30	Q5VVM6	783 aa		11.61	□□□□□ -0.55
MITF-205	ENST00000394348	IL17RE	Q8NFR9	667 aa		11.61	□□□□□ -0.55
MITF-205	ENST00000394348	LTV1	Q96GA3	475 aa	Predicted RBP	11.61	□□□□□ -0.55
MITF-205	ENST00000394348	CPD	O75976	1380 aa		11.61	□□□□□ -0.55
MITF-205	ENST00000394348	CCT4	P50991	539 aa	Known RBP	11.6	□□□□□ -0.55
MITF-205	ENST00000394348	ANKRD24	Q8TF21	1146 aa		11.6	□□□□□ -0.55
MITF-205	ENST00000394348	STK31	Q9BXU1	1019 aa		11.6	□□□□□ -0.55
MITF-205	ENST00000394348	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.6	□□□□□ -0.55
MITF-205	ENST00000394348	ERBB3	P21860	1342 aa		11.6	□□□□□ -0.55
MITF-205	ENST00000394348	SIPA1L3	O60292	1781 aa	Predicted RBP	11.59	□□□□□ -0.55
MITF-205	ENST00000394348	RPAP2	Q8IXW5	612 aa	Predicted RBP	11.59	□□□□□ -0.55
MITF-205	ENST00000394348	ATP10D	Q9P241	1426 aa		11.59	□□□□□ -0.55
MITF-205	ENST00000394348	EVX2	Q03828	476 aa		11.58	□□□□□ -0.56
MITF-205	ENST00000394348	KRT24	Q2M2I5	525 aa		11.58	□□□□□ -0.56
MITF-205	ENST00000394348	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
MITF-205	ENST00000394348	SPATA31A3	Q5VYP0	1347 aa		11.58	□□□□□ -0.56
MITF-205	ENST00000394348	RGPD5	Q99666	1765 aa		11.57	□□□□□ -0.56
MITF-205	ENST00000394348	EIF5B	O60841	1220 aa	Known RBP	11.57	□□□□□ -0.56
MITF-205	ENST00000394348	XPC	Q01831	940 aa	Predicted RBP	11.57	□□□□□ -0.56
MITF-205	ENST00000394348	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.57	□□□□□ -0.56
MITF-205	ENST00000394348	CHD1L	Q86WJ1	897 aa		11.57	□□□□□ -0.56
MITF-205	ENST00000394348	USHBP1	Q8N6Y0	703 aa		11.57	□□□□□ -0.56
MITF-205	ENST00000394348	ANKRD44	Q8N8A2	993 aa		11.57	□□□□□ -0.56
MITF-205	ENST00000394348	PKD1L3	Q7Z443	1732 aa		11.57	□□□□□ -0.56
MITF-205	ENST00000394348	CD44	P16070	742 aa	Known RBP	11.56	□□□□□ -0.56
MITF-205	ENST00000394348	C1orf141	Q5JVX7	400 aa		11.56	□□□□□ -0.56
MITF-205	ENST00000394348	NPM2	Q86SE8	214 aa	Known RBP	11.56	□□□□□ -0.56
MITF-205	ENST00000394348	UPF2	Q9HAU5	1272 aa	Known RBP	11.56	□□□□□ -0.56
MITF-205	ENST00000394348	PARP4	Q9UKK3	1724 aa	Known RBP	11.56	□□□□□ -0.56
MITF-205	ENST00000394348	MRC1	P22897	1456 aa		11.56	□□□□□ -0.56
MITF-205	ENST00000394348	KDM4F	A0A1W2PPD8	638 aa		11.55	□□□□□ -0.56
MITF-205	ENST00000394348	RNMT	O43148	476 aa	Known RBP	11.55	□□□□□ -0.56
MITF-205	ENST00000394348	FLII	Q13045	1269 aa		11.55	□□□□□ -0.56
MITF-205	ENST00000394348	LMOD2	Q6P5Q4	547 aa		11.55	□□□□□ -0.56
MITF-205	ENST00000394348	SIRT2	Q8IXJ6	389 aa		11.55	□□□□□ -0.56
MITF-205	ENST00000394348	LRRC59	Q96AG4	307 aa	Known RBP	11.55	□□□□□ -0.56
MITF-205	ENST00000394348	DCTPP1	Q9H773	170 aa		11.55	□□□□□ -0.56
MITF-205	ENST00000394348	MIS18A	Q9NYP9	233 aa		11.55	□□□□□ -0.56
MITF-205	ENST00000394348	IBTK	Q9P2D0	1353 aa	Predicted RBP	11.54	□□□□□ -0.56
MITF-205	ENST00000394348	HEG1	Q9ULI3	1381 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	SCN11A	Q9UI33	1791 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	NHSL1	Q5SYE7	1610 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	HMMR	O75330	724 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	HSPA2	P54652	639 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	EIF4A1	P60842	406 aa	Known RBP	11.54	□□□□□ -0.56
MITF-205	ENST00000394348	TEF	Q10587	303 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	BMP2KL	Q5H9B9	411 aa		11.54	□□□□□ -0.56
MITF-205	ENST00000394348	SOS2	Q07890	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
MITF-205	ENST00000394348	ABCA3	Q99758	1704 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	GNAI3	P08754	354 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	HDGFL1	Q5TGJ6	251 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	CEP85	Q6P2H3	762 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	BRINP3	Q76B58	766 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	RAPGEF4	Q8WZA2	1011 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	AXIN2	Q9Y2T1	843 aa		11.53	□□□□□ -0.56
MITF-205	ENST00000394348	ZBTB7C	A1YPR0	619 aa		11.52	□□□□□ -0.57
MITF-205	ENST00000394348	TAT	P17735	454 aa	Predicted RBP	11.52	□□□□□ -0.57
MITF-205	ENST00000394348	G2E3	Q7L622	706 aa		11.52	□□□□□ -0.57
MITF-205	ENST00000394348	SPG7	Q9UQ90	795 aa		11.52	□□□□□ -0.57
MITF-205	ENST00000394348	BTBD11	A6QL63	1104 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	GNAI2	P04899	355 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	FKBP5	Q13451	457 aa	Predicted RBP	11.51	□□□□□ -0.57
MITF-205	ENST00000394348	ANKRD45	Q5TZF3	282 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	TBC1D32	Q96NH3	1257 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	LNPK	Q9C0E8	428 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	C1orf115	Q9H7X2	142 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	LGR6	Q9HBX8	967 aa		11.51	□□□□□ -0.57
MITF-205	ENST00000394348	MEGF6	O75095	1541 aa		11.5	□□□□□ -0.57
MITF-205	ENST00000394348	HSP90AB1	P08238	724 aa	Known RBP	11.5	□□□□□ -0.57
MITF-205	ENST00000394348	ZC3H6	P61129	1189 aa	Known RBP	11.5	□□□□□ -0.57
MITF-205	ENST00000394348	SP7	Q8TDD2	431 aa	Predicted RBP	11.5	□□□□□ -0.57
MITF-205	ENST00000394348	MEIS3	Q99687	375 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms