RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 TTC36A6NLP5 189 aa15.52■□□□□ 0.08
USP49-203ENST00000394253 URI1O94763 535 aaPredicted RBP15.52■□□□□ 0.08
USP49-203ENST00000394253 CCDC171Q6TFL3 1326 aa15.52■□□□□ 0.08
USP49-203ENST00000394253 TRERF1Q96PN7 1200 aa15.52■□□□□ 0.08
USP49-203ENST00000394253 SMC1BQ8NDV3 1235 aa15.52■□□□□ 0.07
USP49-203ENST00000394253 NUP133Q8WUM0 1156 aa15.52■□□□□ 0.07
USP49-203ENST00000394253 CTAGE5O15320 804 aa15.52■□□□□ 0.07
USP49-203ENST00000394253 RFC1P35251 1148 aaPredicted RBP15.51■□□□□ 0.07
USP49-203ENST00000394253 RAB3GAP2Q9H2M9 1393 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 PLEKHH1Q9ULM0 1364 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 EBAG9O00559 213 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 NAA25Q14CX7 972 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 PPP4R3AQ6IN85 833 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 ODF2LQ9ULJ1 636 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 CAVIN2O95810 425 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 SCLT1Q96NL6 688 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 RASAL2Q9UJF2 1139 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 CASQ2O14958 399 aaPredicted RBP15.51■□□□□ 0.07
USP49-203ENST00000394253 ATP11AP98196 1134 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 ZBTB16Q05516 673 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 CCDC183Q5T5S1 534 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 APBB1IPQ7Z5R6 666 aaPredicted RBP15.51■□□□□ 0.07
USP49-203ENST00000394253 ZMYND15Q9H091 742 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 ELL2O00472 640 aaPredicted RBP15.51■□□□□ 0.07
USP49-203ENST00000394253 MSH5O43196 834 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 ANO10Q9NW15 660 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
USP49-203ENST00000394253 YEATS4O95619 227 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 GNAI1P63096 354 aa15.51■□□□□ 0.07
USP49-203ENST00000394253 CCDC50Q8IVM0 306 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 TNIP1Q15025 636 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 STMN2Q93045 179 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.07
USP49-203ENST00000394253 MPHOSPH10O00566 681 aaKnown RBP15.5■□□□□ 0.07
USP49-203ENST00000394253 CACNA2D3Q8IZS8 1091 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 OTUD6BQ8N6M0 293 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 CCDC144AA2RUR9 1427 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 CLIP2Q9UDT6 1046 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 PPP6R1Q9UPN7 881 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 MTMR7Q9Y216 660 aa15.5■□□□□ 0.07
USP49-203ENST00000394253 OPA1O60313 960 aa15.49■□□□□ 0.07
USP49-203ENST00000394253 C16orf45Q96MC5 204 aaPredicted RBP15.49■□□□□ 0.07
USP49-203ENST00000394253 ZMAT2Q96NC0 199 aaKnown RBP15.49■□□□□ 0.07
USP49-203ENST00000394253 MRPS9P82933 396 aaKnown RBP15.49■□□□□ 0.07
USP49-203ENST00000394253 LACTBP83111 547 aaPredicted RBP15.49■□□□□ 0.07
USP49-203ENST00000394253 WDR63Q8IWG1 891 aa15.49■□□□□ 0.07
USP49-203ENST00000394253 TTC12Q9H892 705 aaPredicted RBP15.49■□□□□ 0.07
USP49-203ENST00000394253 ARID4AP29374 1257 aaPredicted RBP15.49■□□□□ 0.07
USP49-203ENST00000394253 KRT32Q14532 448 aa15.49■□□□□ 0.07
USP49-203ENST00000394253 C10orf67Q8IYJ2 551 aa15.49■□□□□ 0.07
USP49-203ENST00000394253 SRCIN1Q9C0H9 1055 aa15.49■□□□□ 0.07
USP49-203ENST00000394253 IFT74Q96LB3 600 aa15.49■□□□□ 0.07
USP49-203ENST00000394253 GOLIM4O00461 696 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 RAB34Q9BZG1 259 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 RIC3Q7Z5B4 369 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 PHAXQ9H814 394 aaKnown RBP15.48■□□□□ 0.07
USP49-203ENST00000394253 MIA2Q96PC5 1412 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 SYCE3A1L190 88 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 KIF20AO95235 890 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 GNAI3P08754 354 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 EPSTI1Q96J88 318 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 MPHOSPH9Q99550 1183 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 KIAA0753Q2KHM9 967 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 JADE2Q9NQC1 790 aa15.48■□□□□ 0.07
USP49-203ENST00000394253 LMNTD2Q8IXW0 634 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 PRR16Q569H4 304 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 ZSCAN25Q6NSZ9 544 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 MVPQ14764 893 aaKnown RBP15.47■□□□□ 0.07
USP49-203ENST00000394253 PPFIBP2Q8ND30 876 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 RUNDC1Q96C34 613 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 CCDC172P0C7W6 258 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 SSBP05455 408 aaKnown RBP eCLIP15.47■□□□□ 0.07
USP49-203ENST00000394253 CNGA1P29973 690 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 VCXQ9H320 206 aa15.47■□□□□ 0.07
USP49-203ENST00000394253 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 ALDH3A1P30838 453 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 GBP1P32455 592 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 RIPK4P57078 832 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 CCDC14Q49A88 953 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 GCC1Q96CN9 775 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 SNW1Q13573 536 aaKnown RBP15.46■□□□□ 0.07
USP49-203ENST00000394253 CTAGE6Q86UF2 777 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 MICALL1Q8N3F8 863 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 MGEA5O60502 916 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 B4GALNT4Q76KP1 1039 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 ZSCAN31Q96LW9 406 aaPredicted RBP15.46■□□□□ 0.07
USP49-203ENST00000394253 FERMT2Q96AC1 680 aa15.46■□□□□ 0.07
USP49-203ENST00000394253 ATP2A1O14983 1001 aa15.46■□□□□ 0.06
USP49-203ENST00000394253 NUF2Q9BZD4 464 aa15.46■□□□□ 0.06
USP49-203ENST00000394253 RSPH14Q9UHP6 348 aa15.46■□□□□ 0.06
USP49-203ENST00000394253 PRC1O43663 620 aa15.46■□□□□ 0.06
USP49-203ENST00000394253 WHAMMQ8TF30 809 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 MLECQ14165 292 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 JAKMIP2Q96AA8 810 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 RASSF4Q9H2L5 321 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 VPS8Q8N3P4 1428 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 SATB1Q01826 763 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 CCDC77Q9BR77 488 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 ZNF76P36508 570 aa15.45■□□□□ 0.06
USP49-203ENST00000394253 PRPHP41219 470 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms