RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 STK31Q9BXU1 1019 aa24.12■■□□□ 1.45
CLDND1-203ENST00000394181 KDM6AO15550 1401 aaPredicted RBP24.12■■□□□ 1.45
CLDND1-203ENST00000394181 HDAC1Q13547 482 aaPredicted RBP24.12■■□□□ 1.45
CLDND1-203ENST00000394181 PDZRN3Q9UPQ7 1066 aa24.12■■□□□ 1.45
CLDND1-203ENST00000394181 EIF2S2P20042 333 aaKnown RBP24.11■■□□□ 1.45
CLDND1-203ENST00000394181 LARP1Q6PKG0 1096 aaKnown RBP24.11■■□□□ 1.45
CLDND1-203ENST00000394181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.11■■□□□ 1.45
CLDND1-203ENST00000394181 HDGFL1Q5TGJ6 251 aa24.1■■□□□ 1.45
CLDND1-203ENST00000394181 KDM3BQ7LBC6 1761 aa24.09■■□□□ 1.45
CLDND1-203ENST00000394181 BACH2Q9BYV9 841 aa24.09■■□□□ 1.45
CLDND1-203ENST00000394181 FLIIQ13045 1269 aa24.09■■□□□ 1.45
CLDND1-203ENST00000394181 IFNL2Q8IZJ0 200 aa24.09■■□□□ 1.45
CLDND1-203ENST00000394181 VIRMAQ69YN4 1812 aaKnown RBP24.09■■□□□ 1.45
CLDND1-203ENST00000394181 OVOS2A0A0G2JMS6 1433 aa24.09■■□□□ 1.45
CLDND1-203ENST00000394181 PRAMEF22A3QJZ6 481 aa24.08■■□□□ 1.45
CLDND1-203ENST00000394181 SLC4A10Q6U841 1118 aa24.08■■□□□ 1.45
CLDND1-203ENST00000394181 NFATC2IPQ8NCF5 419 aa24.08■■□□□ 1.45
CLDND1-203ENST00000394181 EVA1CP58658 441 aa24.08■■□□□ 1.44
CLDND1-203ENST00000394181 SLC39A6Q13433 755 aa24.08■■□□□ 1.44
CLDND1-203ENST00000394181 SIRT2Q8IXJ6 389 aa24.08■■□□□ 1.44
CLDND1-203ENST00000394181 PHAXQ9H814 394 aaKnown RBP24.08■■□□□ 1.44
CLDND1-203ENST00000394181 SOS1Q07889 1333 aaPredicted RBP24.07■■□□□ 1.44
CLDND1-203ENST00000394181 SLC52A2Q9HAB3 445 aa24.06■■□□□ 1.44
CLDND1-203ENST00000394181 ADAMTS7Q9UKP4 1686 aa24.06■■□□□ 1.44
CLDND1-203ENST00000394181 FKBP5Q13451 457 aaPredicted RBP24.05■■□□□ 1.44
CLDND1-203ENST00000394181 CARD10Q9BWT7 1032 aa24.05■■□□□ 1.44
CLDND1-203ENST00000394181 ANXA1P04083 346 aa24.05■■□□□ 1.44
CLDND1-203ENST00000394181 BTG4Q9NY30 223 aa24.05■■□□□ 1.44
CLDND1-203ENST00000394181 CHPF2Q9P2E5 772 aa24.05■■□□□ 1.44
CLDND1-203ENST00000394181 USP35Q9P2H5 1018 aa24.05■■□□□ 1.44
CLDND1-203ENST00000394181 MEIS3Q99687 375 aa24.04■■□□□ 1.44
CLDND1-203ENST00000394181 GIGYF1O75420 1035 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-203ENST00000394181 SMC5Q8IY18 1101 aa24.03■■□□□ 1.44
CLDND1-203ENST00000394181 CHMP4BQ9H444 224 aaKnown RBP24.03■■□□□ 1.44
CLDND1-203ENST00000394181 SIPA1L3O60292 1781 aaPredicted RBP24.03■■□□□ 1.44
CLDND1-203ENST00000394181 ZCRB1Q8TBF4 217 aaKnown RBP24.02■■□□□ 1.44
CLDND1-203ENST00000394181 DCAF5Q96JK2 942 aa24.02■■□□□ 1.44
CLDND1-203ENST00000394181 HEG1Q9ULI3 1381 aa24.02■■□□□ 1.44
CLDND1-203ENST00000394181 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
CLDND1-203ENST00000394181 HOXB7P09629 217 aa24.02■■□□□ 1.44
CLDND1-203ENST00000394181 PIP4K2BP78356 416 aa24.02■■□□□ 1.44
CLDND1-203ENST00000394181 PKD1L3Q7Z443 1732 aa24.01■■□□□ 1.43
CLDND1-203ENST00000394181 ZNF790Q6PG37 636 aa24.01■■□□□ 1.43
CLDND1-203ENST00000394181 SCN11AQ9UI33 1791 aa24■■□□□ 1.43
CLDND1-203ENST00000394181 IL2RBP14784 551 aa24■■□□□ 1.43
CLDND1-203ENST00000394181 C8orf34Q49A92 452 aa24■■□□□ 1.43
CLDND1-203ENST00000394181 PROSER3Q2NL68 480 aa23.99■■□□□ 1.43
CLDND1-203ENST00000394181 CCT4P50991 539 aaKnown RBP23.98■■□□□ 1.43
CLDND1-203ENST00000394181 DDX54Q8TDD1 881 aaKnown RBP23.98■■□□□ 1.43
CLDND1-203ENST00000394181 PLEKHG2Q9H7P9 1386 aa23.98■■□□□ 1.43
CLDND1-203ENST00000394181 FAM161AQ3B820 660 aa23.96■■□□□ 1.43
CLDND1-203ENST00000394181 CABP4P57796 275 aa23.96■■□□□ 1.43
CLDND1-203ENST00000394181 ZNF496Q96IT1 587 aaPredicted RBP23.96■■□□□ 1.43
CLDND1-203ENST00000394181 HSP90AB1P08238 724 aaKnown RBP23.95■■□□□ 1.42
CLDND1-203ENST00000394181 NUCB1Q02818 461 aa23.95■■□□□ 1.42
CLDND1-203ENST00000394181 PCDH11XQ9BZA7 1347 aa23.95■■□□□ 1.42
CLDND1-203ENST00000394181 PCDH11YQ9BZA8 1340 aa23.95■■□□□ 1.42
CLDND1-203ENST00000394181 ATP10DQ9P241 1426 aa23.95■■□□□ 1.42
CLDND1-203ENST00000394181 ADAMTS2O95450 1211 aa23.94■■□□□ 1.42
CLDND1-203ENST00000394181 CEP85Q6P2H3 762 aa23.93■■□□□ 1.42
CLDND1-203ENST00000394181 LNPKQ9C0E8 428 aa23.93■■□□□ 1.42
CLDND1-203ENST00000394181 PARP4Q9UKK3 1724 aaKnown RBP23.93■■□□□ 1.42
CLDND1-203ENST00000394181 ANKRD44Q8N8A2 993 aa23.93■■□□□ 1.42
CLDND1-203ENST00000394181 DBF4Q9UBU7 674 aaPredicted RBP23.93■■□□□ 1.42
CLDND1-203ENST00000394181 MRC1P22897 1456 aa23.92■■□□□ 1.42
CLDND1-203ENST00000394181 COL16A1Q07092 1604 aaPredicted RBP23.92■■□□□ 1.42
CLDND1-203ENST00000394181 PI4KAP2A4QPH2 592 aa23.92■■□□□ 1.42
CLDND1-203ENST00000394181 ANKRD45Q5TZF3 282 aa23.92■■□□□ 1.42
CLDND1-203ENST00000394181 NPM2Q86SE8 214 aaKnown RBP23.92■■□□□ 1.42
CLDND1-203ENST00000394181 PI4KAP1Q8N8J0 262 aa23.92■■□□□ 1.42
CLDND1-203ENST00000394181 COL22A1Q8NFW1 1626 aaPredicted RBP23.92■■□□□ 1.42
CLDND1-203ENST00000394181 PDIA6Q15084 440 aa23.91■■□□□ 1.42
CLDND1-203ENST00000394181 CACNA1FO60840 1977 aa23.91■■□□□ 1.42
CLDND1-203ENST00000394181 TOM1O60784 492 aa23.91■■□□□ 1.42
CLDND1-203ENST00000394181 CHD1LQ86WJ1 897 aa23.91■■□□□ 1.42
CLDND1-203ENST00000394181 PHLPP1O60346 1717 aa23.9■■□□□ 1.42
CLDND1-203ENST00000394181 NUTM2BA6NNL0 878 aaPredicted RBP23.89■■□□□ 1.42
CLDND1-203ENST00000394181 NUTM2EB1AL46 878 aaPredicted RBP23.89■■□□□ 1.42
CLDND1-203ENST00000394181 NKX1-1Q15270 411 aaPredicted RBP23.89■■□□□ 1.42
CLDND1-203ENST00000394181 NUTM2AQ8IVF1 878 aaPredicted RBP23.89■■□□□ 1.42
CLDND1-203ENST00000394181 TTC5Q8N0Z6 440 aa23.89■■□□□ 1.42
CLDND1-203ENST00000394181 GCC1Q96CN9 775 aa23.89■■□□□ 1.42
CLDND1-203ENST00000394181 USP16Q9Y5T5 823 aa23.89■■□□□ 1.42
CLDND1-203ENST00000394181 ADCY9O60503 1353 aa23.89■■□□□ 1.41
CLDND1-203ENST00000394181 RPAP2Q8IXW5 612 aaPredicted RBP23.89■■□□□ 1.41
CLDND1-203ENST00000394181 USP44Q9H0E7 712 aa23.89■■□□□ 1.41
CLDND1-203ENST00000394181 COL14A1Q05707 1796 aaKnown RBP23.88■■□□□ 1.41
CLDND1-203ENST00000394181 MSH5O43196 834 aa23.88■■□□□ 1.41
CLDND1-203ENST00000394181 CHMP4AQ9BY43 222 aa23.88■■□□□ 1.41
CLDND1-203ENST00000394181 PIP4K2AP48426 406 aaPredicted RBP23.88■■□□□ 1.41
CLDND1-203ENST00000394181 DCTPP1Q9H773 170 aa23.88■■□□□ 1.41
CLDND1-203ENST00000394181 SHANK3Q9BYB0 1731 aa23.87■■□□□ 1.41
CLDND1-203ENST00000394181 UBAP1LF5GYI3 381 aa23.87■■□□□ 1.41
CLDND1-203ENST00000394181 DNAAF4Q8WXU2 420 aa23.87■■□□□ 1.41
CLDND1-203ENST00000394181 BEND3Q5T5X7 828 aa23.86■■□□□ 1.41
CLDND1-203ENST00000394181 C5P01031 1676 aa23.86■■□□□ 1.41
CLDND1-203ENST00000394181 ERVV-2B6SEH9 535 aa23.86■■□□□ 1.41
CLDND1-203ENST00000394181 GNAI2P04899 355 aa23.86■■□□□ 1.41
CLDND1-203ENST00000394181 AIMP1Q12904 312 aaKnown RBP23.86■■□□□ 1.41
CLDND1-203ENST00000394181 DDX21Q9NR30 783 aaKnown RBP eCLIP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms