RNA–Protein interactions for RNA: ENST00000394154.2

VTI1BP2-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 2, humanhuman

BASIC

Gene VTI1BP2, Length 696 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP2-201ENST00000394154 CD163L1Q9NR16 1453 aa15.3■□□□□ 0.04
VTI1BP2-201ENST00000394154 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
VTI1BP2-201ENST00000394154 MAP2P11137 1827 aaKnown RBP15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 ROCK2O75116 1388 aaKnown RBP15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 GNPATO15228 680 aa15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 HOXC9P31274 260 aa15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 FAM161AQ3B820 660 aa15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 LINC00116Q8NCU8 138 aa15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 RAPGEF4Q8WZA2 1011 aa15.29■□□□□ 0.04
VTI1BP2-201ENST00000394154 ZC3H4Q9UPT8 1303 aaKnown RBP15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 HDGFL2Q7Z4V5 671 aaPredicted RBP15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 NLGN1Q8N2Q7 840 aa15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 DCAF5Q96JK2 942 aa15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 SBF1O95248 1867 aa15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 C4AP0C0L4 1744 aa15.28■□□□□ 0.04
VTI1BP2-201ENST00000394154 PIM2Q9P1W9 311 aa15.27■□□□□ 0.04
VTI1BP2-201ENST00000394154 MAP3K19Q56UN5 1328 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 LOC102724428A0A0B4J2F2 783 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 FOXN1O15353 648 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 VEGFAP15692 232 aaPredicted RBP15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 KCNA3P22001 575 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 AMPHP49418 695 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 SIK1P57059 783 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 TMF1P82094 1093 aa15.26■□□□□ 0.03
VTI1BP2-201ENST00000394154 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
VTI1BP2-201ENST00000394154 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
VTI1BP2-201ENST00000394154 NBPF6Q5VWK0 638 aa15.24■□□□□ 0.03
VTI1BP2-201ENST00000394154 NBPF4Q96M43 638 aa15.24■□□□□ 0.03
VTI1BP2-201ENST00000394154 PARP3Q9Y6F1 533 aa15.24■□□□□ 0.03
VTI1BP2-201ENST00000394154 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
VTI1BP2-201ENST00000394154 CTCFP49711 727 aaPredicted RBP15.23■□□□□ 0.03
VTI1BP2-201ENST00000394154 USHBP1Q8N6Y0 703 aa15.23■□□□□ 0.03
VTI1BP2-201ENST00000394154 CNKSR2Q8WXI2 1034 aa15.23■□□□□ 0.03
VTI1BP2-201ENST00000394154 PIGBQ92521 554 aa15.23■□□□□ 0.03
VTI1BP2-201ENST00000394154 CREBZFQ9NS37 354 aa15.23■□□□□ 0.03
VTI1BP2-201ENST00000394154 SMG6Q86US8 1419 aaKnown RBP15.23■□□□□ 0.03
VTI1BP2-201ENST00000394154 GLTPD2A6NH11 291 aa15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 ITPK1Q13572 414 aa15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 TRAPPC3LQ5T215 181 aa15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 AIDAQ96BJ3 306 aa15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 MKRN1Q9UHC7 482 aaKnown RBP15.22■□□□□ 0.03
VTI1BP2-201ENST00000394154 KDM6AO15550 1401 aaPredicted RBP15.21■□□□□ 0.03
VTI1BP2-201ENST00000394154 CYP27B1O15528 508 aa15.21■□□□□ 0.03
VTI1BP2-201ENST00000394154 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
VTI1BP2-201ENST00000394154 A0A1W2PP64 1363 aa15.21■□□□□ 0.02
VTI1BP2-201ENST00000394154 ATP6V1AP38606 617 aa15.2■□□□□ 0.02
VTI1BP2-201ENST00000394154 MLLT1Q03111 559 aaPredicted RBP15.2■□□□□ 0.02
VTI1BP2-201ENST00000394154 DIEXFQ68CQ4 756 aaKnown RBP15.2■□□□□ 0.02
VTI1BP2-201ENST00000394154 ABHD8Q96I13 439 aa15.2■□□□□ 0.02
VTI1BP2-201ENST00000394154 COG3Q96JB2 828 aa15.2■□□□□ 0.02
VTI1BP2-201ENST00000394154 GYS1P13807 737 aa15.19■□□□□ 0.02
VTI1BP2-201ENST00000394154 HOXD11P31277 338 aaPredicted RBP15.19■□□□□ 0.02
VTI1BP2-201ENST00000394154 SLC12A5Q9H2X9 1139 aa15.19■□□□□ 0.02
VTI1BP2-201ENST00000394154 TIAM2Q8IVF5 1701 aa15.18■□□□□ 0.02
VTI1BP2-201ENST00000394154 CNTNAP1P78357 1384 aa15.18■□□□□ 0.02
VTI1BP2-201ENST00000394154 ST20-MTHFSA0A0A6YYL1 179 aa15.17■□□□□ 0.02
VTI1BP2-201ENST00000394154 LMNB1P20700 586 aa15.17■□□□□ 0.02
VTI1BP2-201ENST00000394154 RFC4P35249 363 aa15.17■□□□□ 0.02
VTI1BP2-201ENST00000394154 NKX1-1Q15270 411 aaPredicted RBP15.17■□□□□ 0.02
VTI1BP2-201ENST00000394154 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
VTI1BP2-201ENST00000394154 TMOD3Q9NYL9 352 aa15.17■□□□□ 0.02
VTI1BP2-201ENST00000394154 RASSF7Q02833 373 aa15.16■□□□□ 0.02
VTI1BP2-201ENST00000394154 ASAP1Q9ULH1 1129 aa15.16■□□□□ 0.02
VTI1BP2-201ENST00000394154 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
VTI1BP2-201ENST00000394154 FBLN1P23142 703 aa15.15■□□□□ 0.02
VTI1BP2-201ENST00000394154 RGS19P49795 217 aa15.15■□□□□ 0.02
VTI1BP2-201ENST00000394154 LBX1P52954 281 aa15.15■□□□□ 0.02
VTI1BP2-201ENST00000394154 CHRNA5P30532 468 aa15.14■□□□□ 0.01
VTI1BP2-201ENST00000394154 RC3H1Q5TC82 1133 aaKnown RBP15.14■□□□□ 0.01
VTI1BP2-201ENST00000394154 KDRP35968 1356 aa15.13■□□□□ 0.01
VTI1BP2-201ENST00000394154 SLC24A1O60721 1099 aa15.13■□□□□ 0.01
VTI1BP2-201ENST00000394154 COL5A3P25940 1745 aaPredicted RBP15.13■□□□□ 0.01
VTI1BP2-201ENST00000394154 RRS1Q15050 365 aaKnown RBP15.13■□□□□ 0.01
VTI1BP2-201ENST00000394154 CHADLQ6NUI6 762 aa15.13■□□□□ 0.01
VTI1BP2-201ENST00000394154 CNTNAP4Q9C0A0 1308 aa15.13■□□□□ 0.01
VTI1BP2-201ENST00000394154 INSRP06213 1382 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 POTECB2RU33 542 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 RPS6KA4O75676 772 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 DPY19L2Q6NUT2 758 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 ATG3Q9NT62 314 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 WBP1LQ9NX94 342 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 SPG7Q9UQ90 795 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 VIRMAQ69YN4 1812 aaKnown RBP15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 CCDC88AQ3V6T2 1871 aa15.12■□□□□ 0.01
VTI1BP2-201ENST00000394154 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
VTI1BP2-201ENST00000394154 CCDC85CA6NKD9 419 aa15.1■□□□□ 0.01
VTI1BP2-201ENST00000394154 HSPA8P11142 646 aaKnown RBP15.1■□□□□ 0.01
VTI1BP2-201ENST00000394154 VEGFBP49765 207 aa15.1■□□□□ 0.01
VTI1BP2-201ENST00000394154 WASHC2AQ641Q2 1341 aa15.1■□□□□ 0.01
VTI1BP2-201ENST00000394154 DDR1Q08345 913 aa15.09■□□□□ 0.01
VTI1BP2-201ENST00000394154 PUS7Q96PZ0 661 aaKnown RBP15.09■□□□□ 0.01
VTI1BP2-201ENST00000394154 RNF216Q9NWF9 866 aaPredicted RBP15.09■□□□□ 0.01
VTI1BP2-201ENST00000394154 FLT4P35916 1363 aa15.09■□□□□ 0.01
VTI1BP2-201ENST00000394154 HSP90AB2PQ58FF8 381 aa15.08■□□□□ 0
VTI1BP2-201ENST00000394154 KIF7Q2M1P5 1343 aa15.08■□□□□ 0
VTI1BP2-201ENST00000394154 KIF24Q5T7B8 1368 aa15.08■□□□□ 0
VTI1BP2-201ENST00000394154 DLEC1Q9Y238 1755 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms