RNA–Protein interactions for RNA: ENST00000394074.6

NAE1-204, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5 BASIC

Gene NAE1, Length 1,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-204ENST00000394074 IL16Q14005 1332 aa29.05■■■□□ 2.24
NAE1-204ENST00000394074 GNAI1P63096 354 aa29.03■■■□□ 2.24
NAE1-204ENST00000394074 CFAP44Q96MT7 982 aa29.03■■■□□ 2.24
NAE1-204ENST00000394074 IFT57Q9NWB7 429 aa29.03■■■□□ 2.24
NAE1-204ENST00000394074 KCNQ2O43526 872 aa29.02■■■□□ 2.24
NAE1-204ENST00000394074 BTBD11A6QL63 1104 aa29.02■■■□□ 2.24
NAE1-204ENST00000394074 PIGBQ92521 554 aa29.02■■■□□ 2.24
NAE1-204ENST00000394074 MIS18AQ9NYP9 233 aa29.02■■■□□ 2.24
NAE1-204ENST00000394074 CDCA7LQ96GN5 454 aa29.01■■■□□ 2.23
NAE1-204ENST00000394074 SPINK5Q9NQ38 1064 aaPredicted RBP29.01■■■□□ 2.23
NAE1-204ENST00000394074 TSPYL4Q9UJ04 414 aa29■■■□□ 2.23
NAE1-204ENST00000394074 E9PSI1 815 aa28.99■■■□□ 2.23
NAE1-204ENST00000394074 ITGB4P16144 1822 aa28.99■■■□□ 2.23
NAE1-204ENST00000394074 CHL1O00533 1208 aa28.99■■■□□ 2.23
NAE1-204ENST00000394074 ZNF853P0CG23 659 aa28.99■■■□□ 2.23
NAE1-204ENST00000394074 MYH16Q9H6N6 1097 aa28.99■■■□□ 2.23
NAE1-204ENST00000394074 SIPA1L3O60292 1781 aaPredicted RBP28.98■■■□□ 2.23
NAE1-204ENST00000394074 BABAM1Q9NWV8 329 aa28.98■■■□□ 2.23
NAE1-204ENST00000394074 EP400Q96L91 3159 aa28.97■■■□□ 2.23
NAE1-204ENST00000394074 SLFN5Q08AF3 891 aa28.97■■■□□ 2.23
NAE1-204ENST00000394074 MBIPQ9NS73 344 aa28.97■■■□□ 2.23
NAE1-204ENST00000394074 TRIM37O94972 964 aa28.96■■■□□ 2.23
NAE1-204ENST00000394074 SLC39A6Q13433 755 aa28.96■■■□□ 2.23
NAE1-204ENST00000394074 PTF1AQ7RTS3 328 aa28.96■■■□□ 2.23
NAE1-204ENST00000394074 TSR2Q969E8 191 aaKnown RBP28.96■■■□□ 2.23
NAE1-204ENST00000394074 NHSQ6T4R5 1651 aa28.95■■■□□ 2.23
NAE1-204ENST00000394074 SBF2Q86WG5 1849 aa28.95■■■□□ 2.23
NAE1-204ENST00000394074 BCL11BQ9C0K0 894 aaPredicted RBP28.95■■■□□ 2.22
NAE1-204ENST00000394074 TTC5Q8N0Z6 440 aa28.94■■■□□ 2.22
NAE1-204ENST00000394074 ZNF790Q6PG37 636 aa28.93■■■□□ 2.22
NAE1-204ENST00000394074 ASAP1Q9ULH1 1129 aa28.93■■■□□ 2.22
NAE1-204ENST00000394074 FANCIQ9NVI1 1328 aa28.93■■■□□ 2.22
NAE1-204ENST00000394074 KCNQ3O43525 872 aa28.92■■■□□ 2.22
NAE1-204ENST00000394074 ATG3Q9NT62 314 aa28.92■■■□□ 2.22
NAE1-204ENST00000394074 TRMT2AQ8IZ69 625 aaKnown RBP28.89■■■□□ 2.22
NAE1-204ENST00000394074 DUSP27Q5VZP5 1158 aa28.89■■■□□ 2.21
NAE1-204ENST00000394074 KDM3BQ7LBC6 1761 aa28.88■■■□□ 2.21
NAE1-204ENST00000394074 PTCD1O75127 700 aaKnown RBP28.87■■■□□ 2.21
NAE1-204ENST00000394074 SMARCC1Q92922 1105 aaPredicted RBP28.87■■■□□ 2.21
NAE1-204ENST00000394074 BTAF1O14981 1849 aa28.87■■■□□ 2.21
NAE1-204ENST00000394074 EIF4A1P60842 406 aaKnown RBP28.86■■■□□ 2.21
NAE1-204ENST00000394074 ZNF496Q96IT1 587 aaPredicted RBP28.86■■■□□ 2.21
NAE1-204ENST00000394074 PAPPAQ13219 1627 aa28.85■■■□□ 2.21
NAE1-204ENST00000394074 FMNL2Q96PY5 1086 aa28.85■■■□□ 2.21
NAE1-204ENST00000394074 PALLDQ8WX93 1383 aa28.85■■■□□ 2.21
NAE1-204ENST00000394074 EXOSC9Q06265 439 aaKnown RBP28.84■■■□□ 2.21
NAE1-204ENST00000394074 RBM42Q9BTD8 480 aaKnown RBP28.84■■■□□ 2.21
NAE1-204ENST00000394074 KRT24Q2M2I5 525 aa28.83■■■□□ 2.21
NAE1-204ENST00000394074 APBA3O96018 575 aa28.82■■■□□ 2.2
NAE1-204ENST00000394074 ELL2O00472 640 aaPredicted RBP28.81■■■□□ 2.2
NAE1-204ENST00000394074 C8orf58Q8NAV2 365 aa28.81■■■□□ 2.2
NAE1-204ENST00000394074 KCPQ6ZWJ8 1503 aa28.81■■■□□ 2.2
NAE1-204ENST00000394074 UBR2Q8IWV8 1755 aa28.79■■■□□ 2.2
NAE1-204ENST00000394074 HEG1Q9ULI3 1381 aa28.79■■■□□ 2.2
NAE1-204ENST00000394074 SF3B2Q13435 895 aaKnown RBP28.79■■■□□ 2.2
NAE1-204ENST00000394074 LOC102724428A0A0B4J2F2 783 aa28.78■■■□□ 2.2
NAE1-204ENST00000394074 SIK1P57059 783 aa28.78■■■□□ 2.2
NAE1-204ENST00000394074 TSPYL6Q8N831 410 aa28.78■■■□□ 2.2
NAE1-204ENST00000394074 GIGYF1O75420 1035 aaPredicted RBP28.77■■■□□ 2.2
NAE1-204ENST00000394074 SNRPA1P09661 255 aaKnown RBP28.77■■■□□ 2.2
NAE1-204ENST00000394074 TWISTNBQ3B726 338 aaPredicted RBP28.77■■■□□ 2.2
NAE1-204ENST00000394074 ILDR2Q71H61 639 aa28.76■■■□□ 2.19
NAE1-204ENST00000394074 VSIG10Q8N0Z9 540 aa28.76■■■□□ 2.19
NAE1-204ENST00000394074 SLC4A9Q96Q91 983 aa28.75■■■□□ 2.19
NAE1-204ENST00000394074 TNS1Q9HBL0 1735 aaKnown RBP28.75■■■□□ 2.19
NAE1-204ENST00000394074 PRAMEF22A3QJZ6 481 aa28.74■■■□□ 2.19
NAE1-204ENST00000394074 PLSCR1O15162 318 aa28.74■■■□□ 2.19
NAE1-204ENST00000394074 ATP6V1AP38606 617 aa28.74■■■□□ 2.19
NAE1-204ENST00000394074 HOXB7P09629 217 aa28.73■■■□□ 2.19
NAE1-204ENST00000394074 CCDC125Q86Z20 511 aa28.73■■■□□ 2.19
NAE1-204ENST00000394074 CCNL1Q9UK58 526 aaPredicted RBP28.73■■■□□ 2.19
NAE1-204ENST00000394074 SOS1Q07889 1333 aaPredicted RBP28.72■■■□□ 2.19
NAE1-204ENST00000394074 VAMP4O75379 141 aa28.71■■■□□ 2.19
NAE1-204ENST00000394074 DNAJC10Q8IXB1 793 aa28.71■■■□□ 2.19
NAE1-204ENST00000394074 TEX13AQ9BXU3 409 aaPredicted RBP28.71■■■□□ 2.19
NAE1-204ENST00000394074 EIF2S2P20042 333 aaKnown RBP28.7■■■□□ 2.19
NAE1-204ENST00000394074 USP16Q9Y5T5 823 aa28.7■■■□□ 2.19
NAE1-204ENST00000394074 CT47B1P0C2W7 299 aaPredicted RBP28.7■■■□□ 2.18
NAE1-204ENST00000394074 KCNQ4P56696 695 aa28.7■■■□□ 2.18
NAE1-204ENST00000394074 LY75O60449 1722 aa28.69■■■□□ 2.18
NAE1-204ENST00000394074 BAG6P46379 1132 aa28.69■■■□□ 2.18
NAE1-204ENST00000394074 NECTIN2Q92692 538 aa28.69■■■□□ 2.18
NAE1-204ENST00000394074 ITPK1Q13572 414 aa28.68■■■□□ 2.18
NAE1-204ENST00000394074 TXNRD1Q16881 649 aa28.68■■■□□ 2.18
NAE1-204ENST00000394074 SLC27A3Q5K4L6 730 aa28.68■■■□□ 2.18
NAE1-204ENST00000394074 HDGFL1Q5TGJ6 251 aa28.68■■■□□ 2.18
NAE1-204ENST00000394074 STARD3NLO95772 234 aa28.67■■■□□ 2.18
NAE1-204ENST00000394074 EN1Q05925 392 aaPredicted RBP28.67■■■□□ 2.18
NAE1-204ENST00000394074 C5P01031 1676 aa28.67■■■□□ 2.18
NAE1-204ENST00000394074 CHMP4AQ9BY43 222 aa28.67■■■□□ 2.18
NAE1-204ENST00000394074 CCDC30Q5VVM6 783 aa28.65■■■□□ 2.18
NAE1-204ENST00000394074 PROM2Q8N271 834 aa28.65■■■□□ 2.18
NAE1-204ENST00000394074 UPF1Q92900 1129 aaKnown RBP eCLIP28.65■■■□□ 2.18
NAE1-204ENST00000394074 ZNF831Q5JPB2 1677 aa28.65■■■□□ 2.18
NAE1-204ENST00000394074 DEFB132Q7Z7B7 95 aa28.64■■■□□ 2.18
NAE1-204ENST00000394074 ZNF428Q96B54 188 aa28.64■■■□□ 2.18
NAE1-204ENST00000394074 LRRC4BQ9NT99 713 aa28.64■■■□□ 2.18
NAE1-204ENST00000394074 TJP1Q07157 1748 aa28.64■■■□□ 2.17
NAE1-204ENST00000394074 CYP19A1P11511 503 aaPredicted RBP28.64■■■□□ 2.17
NAE1-204ENST00000394074 TCERG1O14776 1098 aaKnown RBP28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 134 ms