RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 TMEM131LA2VDJ0 1609 aa22.9■■□□□ 1.26
SMARCC2-203ENST00000394023 NAP1L5Q96NT1 182 aaPredicted RBP22.9■■□□□ 1.26
SMARCC2-203ENST00000394023 PDE1AP54750 535 aa22.9■■□□□ 1.26
SMARCC2-203ENST00000394023 NUCB2P80303 420 aa22.9■■□□□ 1.26
SMARCC2-203ENST00000394023 KRT28Q7Z3Y7 464 aa22.9■■□□□ 1.26
SMARCC2-203ENST00000394023 IL17REQ8NFR9 667 aa22.9■■□□□ 1.26
SMARCC2-203ENST00000394023 ANKRD24Q8TF21 1146 aa22.89■■□□□ 1.26
SMARCC2-203ENST00000394023 DNAAF4Q8WXU2 420 aa22.89■■□□□ 1.26
SMARCC2-203ENST00000394023 CPSF1Q10570 1443 aaKnown RBP22.89■■□□□ 1.25
SMARCC2-203ENST00000394023 PTMSP20962 102 aa22.89■■□□□ 1.25
SMARCC2-203ENST00000394023 NBPF6Q5VWK0 638 aa22.89■■□□□ 1.25
SMARCC2-203ENST00000394023 NBPF4Q96M43 638 aa22.89■■□□□ 1.25
SMARCC2-203ENST00000394023 SKOR2Q2VWA4 1001 aaPredicted RBP22.89■■□□□ 1.25
SMARCC2-203ENST00000394023 CDK12Q9NYV4 1490 aaPredicted RBP22.88■■□□□ 1.25
SMARCC2-203ENST00000394023 PTMAP06454 111 aaKnown RBP22.88■■□□□ 1.25
SMARCC2-203ENST00000394023 GSPT1P15170 499 aaKnown RBP22.88■■□□□ 1.25
SMARCC2-203ENST00000394023 HSP90AB4PQ58FF6 505 aa22.88■■□□□ 1.25
SMARCC2-203ENST00000394023 RIMBP3CA6NJZ7 1639 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 RIMBP3BA6NNM3 1639 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 RIMBP3Q9UFD9 1639 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 MYO3AQ8NEV4 1616 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 TATP17735 454 aaPredicted RBP22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 CWC27Q6UX04 472 aaKnown RBP22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 CPS1P31327 1500 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 MED14O60244 1454 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 GCP02774 474 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 CHRNA2Q15822 529 aa22.87■■□□□ 1.25
SMARCC2-203ENST00000394023 PRPF40AO75400 957 aaKnown RBP22.86■■□□□ 1.25
SMARCC2-203ENST00000394023 BRPF1P55201 1214 aaPredicted RBP22.86■■□□□ 1.25
SMARCC2-203ENST00000394023 PNMA6EA0A0J9YXQ4 647 aa22.86■■□□□ 1.25
SMARCC2-203ENST00000394023 SLC39A6Q13433 755 aa22.86■■□□□ 1.25
SMARCC2-203ENST00000394023 CNTROBQ8N137 903 aa22.85■■□□□ 1.25
SMARCC2-203ENST00000394023 MAP3K5Q99683 1374 aa22.85■■□□□ 1.25
SMARCC2-203ENST00000394023 CABLES1Q8TDN4 633 aa22.85■■□□□ 1.25
SMARCC2-203ENST00000394023 RBM25P49756 843 aaKnown RBP22.85■■□□□ 1.25
SMARCC2-203ENST00000394023 CAVIN1Q6NZI2 390 aaKnown RBP22.85■■□□□ 1.25
SMARCC2-203ENST00000394023 IP6K1Q92551 441 aa22.84■■□□□ 1.25
SMARCC2-203ENST00000394023 KCNQ3O43525 872 aa22.84■■□□□ 1.25
SMARCC2-203ENST00000394023 JARID2Q92833 1246 aaPredicted RBP22.84■■□□□ 1.25
SMARCC2-203ENST00000394023 LARP6Q9BRS8 491 aaKnown RBP22.84■■□□□ 1.25
SMARCC2-203ENST00000394023 NLRP1Q9C000 1473 aa22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 CIZ1Q9ULV3 898 aaPredicted RBP22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 MAP3K2Q9Y2U5 619 aa22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 PIP4K2AP48426 406 aaPredicted RBP22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 EVA1CP58658 441 aa22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 DDX54Q8TDD1 881 aaKnown RBP22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 MYO5BQ9ULV0 1848 aa22.83■■□□□ 1.25
SMARCC2-203ENST00000394023 HTATSF1O43719 755 aaKnown RBP22.83■■□□□ 1.24
SMARCC2-203ENST00000394023 ATP8B2P98198 1209 aa22.83■■□□□ 1.24
SMARCC2-203ENST00000394023 DBF4Q9UBU7 674 aaPredicted RBP22.82■■□□□ 1.24
SMARCC2-203ENST00000394023 AMOTQ4VCS5 1084 aa22.82■■□□□ 1.24
SMARCC2-203ENST00000394023 RUFY2Q8WXA3 655 aa22.82■■□□□ 1.24
SMARCC2-203ENST00000394023 RTL1A6NKG5 1358 aa22.82■■□□□ 1.24
SMARCC2-203ENST00000394023 AACSQ86V21 672 aa22.82■■□□□ 1.24
SMARCC2-203ENST00000394023 RICTORQ6R327 1708 aa22.81■■□□□ 1.24
SMARCC2-203ENST00000394023 DDX17Q92841 729 aaKnown RBP22.81■■□□□ 1.24
SMARCC2-203ENST00000394023 KIF1BPQ96EK5 621 aa22.81■■□□□ 1.24
SMARCC2-203ENST00000394023 STRN4Q9NRL3 753 aa22.81■■□□□ 1.24
SMARCC2-203ENST00000394023 IFT172Q9UG01 1749 aa22.81■■□□□ 1.24
SMARCC2-203ENST00000394023 SNX21Q969T3 373 aa22.8■■□□□ 1.24
SMARCC2-203ENST00000394023 ARHGEF10O15013 1369 aa22.8■■□□□ 1.24
SMARCC2-203ENST00000394023 KIAA0232Q92628 1395 aa22.8■■□□□ 1.24
SMARCC2-203ENST00000394023 DIP2BQ9P265 1576 aa22.79■■□□□ 1.24
SMARCC2-203ENST00000394023 GORABQ5T7V8 394 aa22.79■■□□□ 1.24
SMARCC2-203ENST00000394023 COL3A1P02461 1466 aaPredicted RBP22.79■■□□□ 1.24
SMARCC2-203ENST00000394023 MRE11P49959 708 aa22.79■■□□□ 1.24
SMARCC2-203ENST00000394023 USP26Q9BXU7 913 aa22.79■■□□□ 1.24
SMARCC2-203ENST00000394023 CD2BP2O95400 341 aaKnown RBP22.79■■□□□ 1.24
SMARCC2-203ENST00000394023 IGSF1Q8N6C5 1336 aa22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 CWF19L2Q2TBE0 894 aaKnown RBP22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 RHPN1Q8TCX5 695 aa22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 NEUROD6Q96NK8 337 aa22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 FSD1Q9BTV5 496 aa22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 ZKSCAN1P17029 563 aaPredicted RBP22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 SPG7Q9UQ90 795 aa22.78■■□□□ 1.24
SMARCC2-203ENST00000394023 CABP4P57796 275 aa22.77■■□□□ 1.24
SMARCC2-203ENST00000394023 CCDC8Q9H0W5 538 aaPredicted RBP22.77■■□□□ 1.24
SMARCC2-203ENST00000394023 PA2G4Q9UQ80 394 aaKnown RBP22.77■■□□□ 1.24
SMARCC2-203ENST00000394023 GOLGA6L4A6NEF3 574 aa22.77■■□□□ 1.24
SMARCC2-203ENST00000394023 NBPF7P0C2Y1 421 aaPredicted RBP22.77■■□□□ 1.23
SMARCC2-203ENST00000394023 TAF7LQ5H9L4 462 aa22.77■■□□□ 1.23
SMARCC2-203ENST00000394023 AKAP4Q5JQC9 854 aa22.77■■□□□ 1.23
SMARCC2-203ENST00000394023 TOM1L2Q6ZVM7 507 aa22.76■■□□□ 1.23
SMARCC2-203ENST00000394023 ANTXR1Q9H6X2 564 aa22.76■■□□□ 1.23
SMARCC2-203ENST00000394023 AGLP35573 1532 aa22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 PRDM11Q9NQV5 511 aa22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 HSP90B1P14625 803 aaKnown RBP22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 GRPEL1Q9HAV7 217 aa22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 SETD1BQ9UPS6 1966 aaKnown RBP22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 PTCD1O75127 700 aaKnown RBP22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 ZGPATQ8N5A5 531 aaKnown RBP22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 PTCH1Q13635 1447 aa22.75■■□□□ 1.23
SMARCC2-203ENST00000394023 SYTL4Q96C24 671 aaPredicted RBP22.74■■□□□ 1.23
SMARCC2-203ENST00000394023 MYD88Q99836 296 aa22.74■■□□□ 1.23
SMARCC2-203ENST00000394023 PANK2Q9BZ23 570 aa22.74■■□□□ 1.23
SMARCC2-203ENST00000394023 VPS37CA5D8V6 355 aaPredicted RBP22.74■■□□□ 1.23
SMARCC2-203ENST00000394023 USP44Q9H0E7 712 aa22.74■■□□□ 1.23
SMARCC2-203ENST00000394023 SMC3Q9UQE7 1217 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms