RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 OGFRQ9NZT2 677 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 AOX1Q06278 1338 aa10.2□□□□□ -0.78
GABRA1-202ENST00000393943 CCDC70Q6NSX1 233 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 TNNT1P13805 278 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 PDE1AP54750 535 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 GABPB1Q06547 395 aaPredicted RBP10.19□□□□□ -0.78
GABRA1-202ENST00000393943 BLOC1S2Q6QNY1 142 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.19□□□□□ -0.78
GABRA1-202ENST00000393943 FILIP1Q7Z7B0 1213 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 SDF4Q9BRK5 362 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 CHMP3Q9Y3E7 222 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 SMTNL1A8MU46 457 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 KRT222Q8N1A0 295 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 NGDNQ8NEJ9 315 aaKnown RBP10.19□□□□□ -0.78
GABRA1-202ENST00000393943 PLA2R1Q13018 1463 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 KDM4AO75164 1064 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 TEFQ10587 303 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 HSP90B2PQ58FF3 399 aa10.19□□□□□ -0.78
GABRA1-202ENST00000393943 SOX12O15370 315 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 GAS2L3Q86XJ1 694 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 RBM42Q9BTD8 480 aaKnown RBP10.18□□□□□ -0.78
GABRA1-202ENST00000393943 PHF23Q9BUL5 403 aaPredicted RBP10.18□□□□□ -0.78
GABRA1-202ENST00000393943 ANO10Q9NW15 660 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 A0A0U1RQG5 324 aaPredicted RBP10.18□□□□□ -0.78
GABRA1-202ENST00000393943 DHX16O60231 1041 aaKnown RBP10.18□□□□□ -0.78
GABRA1-202ENST00000393943 SULT6B1Q6IMI4 303 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 OLFM4Q6UX06 510 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 USP48Q86UV5 1035 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 BMS1Q14692 1282 aaKnown RBP10.18□□□□□ -0.78
GABRA1-202ENST00000393943 SYNE3Q6ZMZ3 975 aa10.18□□□□□ -0.78
GABRA1-202ENST00000393943 ABCC4O15439 1325 aa10.17□□□□□ -0.78
GABRA1-202ENST00000393943 TTC21BQ7Z4L5 1316 aa10.17□□□□□ -0.78
GABRA1-202ENST00000393943 JAKMIP1Q96N16 626 aaKnown RBP10.17□□□□□ -0.78
GABRA1-202ENST00000393943 FYB1O15117 783 aa10.17□□□□□ -0.78
GABRA1-202ENST00000393943 HCLS1P14317 486 aaPredicted RBP10.17□□□□□ -0.78
GABRA1-202ENST00000393943 JMYQ8N9B5 988 aa10.17□□□□□ -0.78
GABRA1-202ENST00000393943 TRIM35Q9UPQ4 493 aa10.17□□□□□ -0.78
GABRA1-202ENST00000393943 CLIP2Q9UDT6 1046 aa10.17□□□□□ -0.78
GABRA1-202ENST00000393943 EIF3JO75822 258 aaKnown RBP10.16□□□□□ -0.78
GABRA1-202ENST00000393943 BRD1O95696 1058 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 CASTP20810 708 aaKnown RBP10.16□□□□□ -0.78
GABRA1-202ENST00000393943 LEKR1Q6ZMV7 388 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 PRDM10Q9NQV6 1147 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 F13A1P00488 732 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 CEP85Q6P2H3 762 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 ANKRD20A12PQ8NF67 263 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 FSD1Q9BTV5 496 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 UPF3BQ9BZI7 483 aaKnown RBP10.16□□□□□ -0.78
GABRA1-202ENST00000393943 EID1Q9Y6B2 187 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 MADDQ8WXG6 1647 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 ERLIN1O75477 346 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 TMCO3Q6UWJ1 677 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 TRIM29Q14134 588 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 UBXN4Q92575 508 aa10.16□□□□□ -0.78
GABRA1-202ENST00000393943 CPLX1O14810 134 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 SMARCA5O60264 1052 aaPredicted RBP10.15□□□□□ -0.78
GABRA1-202ENST00000393943 TSR1Q2NL82 804 aaKnown RBP10.15□□□□□ -0.78
GABRA1-202ENST00000393943 TIGD1Q96MW7 591 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 EXOC6BQ9Y2D4 811 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 NCOA3Q9Y6Q9 1424 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 STX1AQ16623 288 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 PDLIM2Q96JY6 352 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 ATP7AQ04656 1500 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 GOLGA6L9A6NEM1 432 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 C1orf141Q5JVX7 400 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 CCDC150Q8NCX0 1101 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 ZNF397Q8NF99 534 aaPredicted RBP10.15□□□□□ -0.78
GABRA1-202ENST00000393943 HMG20BQ9P0W2 317 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 DACH1Q9UI36 760 aa10.15□□□□□ -0.78
GABRA1-202ENST00000393943 TET3O43151 1660 aa10.15□□□□□ -0.79
GABRA1-202ENST00000393943 A0A1W2PP64 1363 aa10.15□□□□□ -0.79
GABRA1-202ENST00000393943 ZSCAN12O43309 604 aa10.15□□□□□ -0.79
GABRA1-202ENST00000393943 CEP135Q66GS9 1140 aa10.15□□□□□ -0.79
GABRA1-202ENST00000393943 SRRTQ9BXP5 876 aaKnown RBP10.15□□□□□ -0.79
GABRA1-202ENST00000393943 ZSCAN16Q9H4T2 348 aaPredicted RBP10.15□□□□□ -0.79
GABRA1-202ENST00000393943 SMC2O95347 1197 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 SYCP1Q15431 976 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 HDGFL1Q5TGJ6 251 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 ZGPATQ8N5A5 531 aaKnown RBP10.14□□□□□ -0.79
GABRA1-202ENST00000393943 ZHX1Q9UKY1 873 aaPredicted RBP10.14□□□□□ -0.79
GABRA1-202ENST00000393943 NPHP3Q7Z494 1330 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
GABRA1-202ENST00000393943 SFPQP23246 707 aaKnown RBP eCLIP10.14□□□□□ -0.79
GABRA1-202ENST00000393943 FAM135BQ49AJ0 1406 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 GORABQ5T7V8 394 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 CCDC83Q8IWF9 413 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 KIAA1210Q9ULL0 1709 aa10.14□□□□□ -0.79
GABRA1-202ENST00000393943 KIF1BO60333 1816 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 ZNF165P49910 485 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 SRGAP3O43295 1099 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 GJB2P29033 226 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 THUMPD2Q9BTF0 503 aaKnown RBP10.13□□□□□ -0.79
GABRA1-202ENST00000393943 TMEM63CQ9P1W3 806 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 DMTNQ08495 405 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 C16orf45Q96MC5 204 aaPredicted RBP10.13□□□□□ -0.79
GABRA1-202ENST00000393943 RNF17Q9BXT8 1623 aaKnown RBP10.13□□□□□ -0.79
GABRA1-202ENST00000393943 ASXL2Q76L83 1435 aa10.13□□□□□ -0.79
GABRA1-202ENST00000393943 ATP8B2P98198 1209 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms