RNA–Protein interactions for RNA: ENST00000393743.7

DDX60-201, Transcript of DExD/H-box helicase 60, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX60, Length 6,071 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-201ENST00000393743 ME1P48163 572 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 CCDC178Q5BJE1 867 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 PYM1Q9BRP8 204 aaKnown RBP8.44□□□□□ -1.06
DDX60-201ENST00000393743 SIL1Q9H173 461 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 AMOTL2Q9Y2J4 779 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 GRIN2AQ12879 1464 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 POLR3DP05423 398 aaPredicted RBP8.44□□□□□ -1.06
DDX60-201ENST00000393743 IQCA1Q86XH1 822 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 IFNL2Q8IZJ0 200 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 FAM43AQ8N2R8 423 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
DDX60-201ENST00000393743 PPP1R42Q7Z4L9 355 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 DZIP1Q86YF9 867 aaKnown RBP8.44□□□□□ -1.06
DDX60-201ENST00000393743 CCDC191Q8NCU4 936 aa8.44□□□□□ -1.06
DDX60-201ENST00000393743 CTCFLQ8NI51 663 aaPredicted RBP8.44□□□□□ -1.06
DDX60-201ENST00000393743 SERPINC1P01008 464 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 DUSP27Q5VZP5 1158 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 SMARCC1Q92922 1105 aaPredicted RBP8.43□□□□□ -1.06
DDX60-201ENST00000393743 PLEKHH1Q9ULM0 1364 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 PTPRCP08575 1304 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 IDH1O75874 414 aaKnown RBP8.43□□□□□ -1.06
DDX60-201ENST00000393743 MKNK2Q9HBH9 465 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 MSH6P52701 1360 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 K7ELQ4 463 aaPredicted RBP8.43□□□□□ -1.06
DDX60-201ENST00000393743 TSR2Q969E8 191 aaKnown RBP8.43□□□□□ -1.06
DDX60-201ENST00000393743 CWC15Q9P013 229 aaKnown RBP8.43□□□□□ -1.06
DDX60-201ENST00000393743 SH2B1Q9NRF2 756 aaPredicted RBP8.43□□□□□ -1.06
DDX60-201ENST00000393743 GOLGA6L10A6NI86 522 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 TNMDQ9H2S6 317 aa8.43□□□□□ -1.06
DDX60-201ENST00000393743 TANGO6Q9C0B7 1094 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 ZHX3Q9H4I2 956 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 BAG3O95817 575 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 RRS1Q15050 365 aaKnown RBP8.42□□□□□ -1.06
DDX60-201ENST00000393743 TMEM266Q2M3C6 531 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 ZNF444Q8N0Y2 327 aaPredicted RBP8.42□□□□□ -1.06
DDX60-201ENST00000393743 NAPBQ9H115 298 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 EZRP15311 586 aaKnown RBP8.42□□□□□ -1.06
DDX60-201ENST00000393743 GSTO1P78417 241 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 ERLIN1O75477 346 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 NEBLO76041 1014 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 JAKMIP3Q5VZ66 844 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 ANKIB1Q9P2G1 1089 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 CAMSAP2Q08AD1 1489 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 ZNF397Q8NF99 534 aaPredicted RBP8.42□□□□□ -1.06
DDX60-201ENST00000393743 ABCF2Q9UG63 623 aa8.42□□□□□ -1.06
DDX60-201ENST00000393743 DHX29Q7Z478 1369 aaKnown RBP8.42□□□□□ -1.06
DDX60-201ENST00000393743 NAIPQ13075 1403 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 FIBPO43427 364 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 CCDC181Q5TID7 509 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 KRT28Q7Z3Y7 464 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 TSG101Q99816 390 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 TRMT112Q9UI30 125 aaKnown RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 TNRQ92752 1358 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 URB2Q14146 1524 aaKnown RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 NPHP3Q7Z494 1330 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 BICDL1Q6ZP65 573 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 STXBP4Q6ZWJ1 553 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 VPS36Q86VN1 386 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 DNAAF4Q8WXU2 420 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 LRRC27Q9C0I9 530 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 ARHGEF11O15085 1522 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 TRAK2O60296 914 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 HLA-DOAP06340 250 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 UQCRFS1P1P0C7P4 283 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 SEPT7Q16181 437 aaKnown RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 ZNF771Q7L3S4 317 aaPredicted RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 ZGPATQ8N5A5 531 aaKnown RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 SPATA32Q96LK8 384 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 JAKMIP1Q96N16 626 aaKnown RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 CABP5Q9NP86 173 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 MYO1BO43795 1136 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 KIF5BP33176 963 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 DDX46Q7L014 1031 aaKnown RBP8.41□□□□□ -1.06
DDX60-201ENST00000393743 CCDC150Q8NCX0 1101 aa8.41□□□□□ -1.06
DDX60-201ENST00000393743 BAG4O95429 457 aaKnown RBP8.4□□□□□ -1.06
DDX60-201ENST00000393743 ST5P78524 1137 aa8.4□□□□□ -1.06
DDX60-201ENST00000393743 IL16Q14005 1332 aa8.4□□□□□ -1.06
DDX60-201ENST00000393743 KIF2AO00139 706 aaPredicted RBP8.4□□□□□ -1.06
DDX60-201ENST00000393743 SSBP05455 408 aaKnown RBP eCLIP8.4□□□□□ -1.06
DDX60-201ENST00000393743 MX1P20591 662 aa8.4□□□□□ -1.06
DDX60-201ENST00000393743 SCAF11Q99590 1463 aaKnown RBP8.4□□□□□ -1.07
DDX60-201ENST00000393743 SLFN5Q08AF3 891 aa8.4□□□□□ -1.07
DDX60-201ENST00000393743 NBPF8Q3BBV2 869 aa8.4□□□□□ -1.07
DDX60-201ENST00000393743 ANKRD36BQ8N2N9 1353 aa8.4□□□□□ -1.07
DDX60-201ENST00000393743 MATR3P43243 847 aaKnown RBP eCLIP8.4□□□□□ -1.07
DDX60-201ENST00000393743 TAF4BQ92750 862 aa8.4□□□□□ -1.07
DDX60-201ENST00000393743 SCAND2PQ9GZW5 306 aaPredicted RBP8.4□□□□□ -1.07
DDX60-201ENST00000393743 B4DLN1 442 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 PRPF40AO75400 957 aaKnown RBP8.39□□□□□ -1.07
DDX60-201ENST00000393743 NEFHP12036 1026 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 MRPL12P52815 198 aaKnown RBP8.39□□□□□ -1.07
DDX60-201ENST00000393743 CETN1Q12798 172 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 ARID3AQ99856 593 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 C1orf115Q9H7X2 142 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 FANCAO15360 1455 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 GOLGA6L7A0A1B0GV03 622 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 BRPF1P55201 1214 aaPredicted RBP8.39□□□□□ -1.07
DDX60-201ENST00000393743 CDCA7LQ96GN5 454 aa8.39□□□□□ -1.07
DDX60-201ENST00000393743 PTCD1O75127 700 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms