RNA–Protein interactions for RNA: ENST00000393709.3

CYB561D1-203, Transcript of cytochrome b561 family member D1, humanhuman

APPRIS ALT1 TSL 4 BASIC

Gene CYB561D1, Length 620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561D1-203ENST00000393709 LGR6Q9HBX8 967 aa18.48■□□□□ 0.55
CYB561D1-203ENST00000393709 C4BP0C0L5 1744 aa18.48■□□□□ 0.55
CYB561D1-203ENST00000393709 C1orf141Q5JVX7 400 aa18.47■□□□□ 0.55
CYB561D1-203ENST00000393709 ZNF831Q5JPB2 1677 aa18.47■□□□□ 0.55
CYB561D1-203ENST00000393709 SIPA1L3O60292 1781 aaPredicted RBP18.46■□□□□ 0.55
CYB561D1-203ENST00000393709 ITPK1Q13572 414 aa18.46■□□□□ 0.55
CYB561D1-203ENST00000393709 AMIGO3Q86WK7 504 aa18.46■□□□□ 0.55
CYB561D1-203ENST00000393709 FHDC1Q9C0D6 1143 aaPredicted RBP18.46■□□□□ 0.55
CYB561D1-203ENST00000393709 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 RNMTO43148 476 aaKnown RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 SLC16A10Q8TF71 515 aa18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 SMARCC1Q92922 1105 aaPredicted RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 ARXQ96QS3 562 aa18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 PRKRIP1Q9H875 184 aaPredicted RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 COL5A3P25940 1745 aaPredicted RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 TJP1Q07157 1748 aa18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
CYB561D1-203ENST00000393709 MAP3K5Q99683 1374 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 COL24A1Q17RW2 1714 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 ZNF316A6NFI3 1004 aaPredicted RBP18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 MSH5O43196 834 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 SIK1P57059 783 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 LINC00116Q8NCU8 138 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 SYT17Q9BSW7 474 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
CYB561D1-203ENST00000393709 UBR3Q6ZT12 1888 aa18.43■□□□□ 0.54
CYB561D1-203ENST00000393709 CABP4P57796 275 aa18.43■□□□□ 0.54
CYB561D1-203ENST00000393709 COL23A1Q86Y22 540 aaPredicted RBP18.43■□□□□ 0.54
CYB561D1-203ENST00000393709 NFATC2IPQ8NCF5 419 aa18.43■□□□□ 0.54
CYB561D1-203ENST00000393709 IL17REQ8NFR9 667 aa18.43■□□□□ 0.54
CYB561D1-203ENST00000393709 NUDCQ9Y266 331 aa18.43■□□□□ 0.54
CYB561D1-203ENST00000393709 DCAF8L1A6NGE4 600 aa18.42■□□□□ 0.54
CYB561D1-203ENST00000393709 PLEKHF1Q96S99 279 aa18.42■□□□□ 0.54
CYB561D1-203ENST00000393709 SLC52A2Q9HAB3 445 aa18.42■□□□□ 0.54
CYB561D1-203ENST00000393709 UBR2Q8IWV8 1755 aa18.42■□□□□ 0.54
CYB561D1-203ENST00000393709 CEMIPQ8WUJ3 1361 aa18.42■□□□□ 0.54
CYB561D1-203ENST00000393709 FCHSD2O94868 740 aa18.41■□□□□ 0.54
CYB561D1-203ENST00000393709 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
CYB561D1-203ENST00000393709 SMIM5Q71RC9 77 aa18.4■□□□□ 0.54
CYB561D1-203ENST00000393709 POLD1P28340 1107 aa18.39■□□□□ 0.53
CYB561D1-203ENST00000393709 KLHL34Q8N239 644 aa18.39■□□□□ 0.53
CYB561D1-203ENST00000393709 DLG5Q8TDM6 1919 aa18.39■□□□□ 0.53
CYB561D1-203ENST00000393709 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.53
CYB561D1-203ENST00000393709 GNAT3A8MTJ3 354 aa18.37■□□□□ 0.53
CYB561D1-203ENST00000393709 ATP6V1AP38606 617 aa18.37■□□□□ 0.53
CYB561D1-203ENST00000393709 SLC39A6Q13433 755 aa18.37■□□□□ 0.53
CYB561D1-203ENST00000393709 MSL1Q68DK7 614 aa18.37■□□□□ 0.53
CYB561D1-203ENST00000393709 AK7Q96M32 723 aa18.37■□□□□ 0.53
CYB561D1-203ENST00000393709 YY1P25490 414 aa18.36■□□□□ 0.53
CYB561D1-203ENST00000393709 HMGB2P26583 209 aaKnown RBP18.36■□□□□ 0.53
CYB561D1-203ENST00000393709 PTCD1O75127 700 aaKnown RBP18.35■□□□□ 0.53
CYB561D1-203ENST00000393709 PHF14O94880 888 aa18.35■□□□□ 0.53
CYB561D1-203ENST00000393709 RBM42Q9BTD8 480 aaKnown RBP18.35■□□□□ 0.53
CYB561D1-203ENST00000393709 DCTN1Q14203 1278 aa18.34■□□□□ 0.53
CYB561D1-203ENST00000393709 CCDC184Q52MB2 194 aa18.34■□□□□ 0.53
CYB561D1-203ENST00000393709 FLAD1Q8NFF5 587 aa18.34■□□□□ 0.53
CYB561D1-203ENST00000393709 MCM10Q7L590 875 aa18.33■□□□□ 0.52
CYB561D1-203ENST00000393709 C4AP0C0L4 1744 aa18.32■□□□□ 0.52
CYB561D1-203ENST00000393709 CNTNAP4Q9C0A0 1308 aa18.32■□□□□ 0.52
CYB561D1-203ENST00000393709 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.32■□□□□ 0.52
CYB561D1-203ENST00000393709 KCNQ3O43525 872 aa18.31■□□□□ 0.52
CYB561D1-203ENST00000393709 DNAJC10Q8IXB1 793 aa18.31■□□□□ 0.52
CYB561D1-203ENST00000393709 GNPATO15228 680 aa18.3■□□□□ 0.52
CYB561D1-203ENST00000393709 NFE2L2Q16236 605 aa18.3■□□□□ 0.52
CYB561D1-203ENST00000393709 NLGN2Q8NFZ4 835 aa18.3■□□□□ 0.52
CYB561D1-203ENST00000393709 SSFA2P28290 1259 aa18.29■□□□□ 0.52
CYB561D1-203ENST00000393709 ZNF496Q96IT1 587 aaPredicted RBP18.29■□□□□ 0.52
CYB561D1-203ENST00000393709 KDM3BQ7LBC6 1761 aa18.29■□□□□ 0.52
CYB561D1-203ENST00000393709 TEFQ10587 303 aa18.28■□□□□ 0.52
CYB561D1-203ENST00000393709 GPR162Q16538 588 aa18.28■□□□□ 0.52
CYB561D1-203ENST00000393709 RC3H1Q5TC82 1133 aaKnown RBP18.28■□□□□ 0.52
CYB561D1-203ENST00000393709 INTS5Q6P9B9 1019 aaKnown RBP18.28■□□□□ 0.52
CYB561D1-203ENST00000393709 THUMPD2Q9BTF0 503 aaKnown RBP18.28■□□□□ 0.52
CYB561D1-203ENST00000393709 HTATSF1O43719 755 aaKnown RBP18.27■□□□□ 0.52
CYB561D1-203ENST00000393709 CRKLP46109 303 aaKnown RBP18.27■□□□□ 0.52
CYB561D1-203ENST00000393709 ZNF790Q6PG37 636 aa18.27■□□□□ 0.52
CYB561D1-203ENST00000393709 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
CYB561D1-203ENST00000393709 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
CYB561D1-203ENST00000393709 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
CYB561D1-203ENST00000393709 CHD4Q14839 1912 aa18.27■□□□□ 0.51
CYB561D1-203ENST00000393709 UTRNP46939 3433 aa18.27■□□□□ 0.51
CYB561D1-203ENST00000393709 CYP19A1P11511 503 aaPredicted RBP18.26■□□□□ 0.51
CYB561D1-203ENST00000393709 HEG1Q9ULI3 1381 aa18.26■□□□□ 0.51
CYB561D1-203ENST00000393709 MAPK8IP3Q9UPT6 1336 aa18.24■□□□□ 0.51
CYB561D1-203ENST00000393709 RPS6KA4O75676 772 aa18.24■□□□□ 0.51
CYB561D1-203ENST00000393709 VSIG10Q8N0Z9 540 aa18.24■□□□□ 0.51
CYB561D1-203ENST00000393709 RTCBQ9Y3I0 505 aaKnown RBP18.24■□□□□ 0.51
CYB561D1-203ENST00000393709 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 TMPOP42166 694 aaKnown RBP18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 TRAPPC3LQ5T215 181 aa18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 ZBTB1Q9Y2K1 713 aa18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 SOS1Q07889 1333 aaPredicted RBP18.23■□□□□ 0.51
CYB561D1-203ENST00000393709 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
CYB561D1-203ENST00000393709 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
CYB561D1-203ENST00000393709 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms