RNA–Protein interactions for RNA: ENST00000393243.5

GSE1-202, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GSE1, Length 7,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-202ENST00000393243 RAB11FIP4Q86YS3 637 aa15.66■□□□□ 0.1
GSE1-202ENST00000393243 PTPN14Q15678 1187 aa15.66■□□□□ 0.1
GSE1-202ENST00000393243 METTL24Q5JXM2 366 aa15.66■□□□□ 0.1
GSE1-202ENST00000393243 CCT2P78371 535 aaKnown RBP15.66■□□□□ 0.1
GSE1-202ENST00000393243 BIN1O00499 593 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 SPTY2D1Q68D10 685 aaPredicted RBP15.65■□□□□ 0.1
GSE1-202ENST00000393243 USHBP1Q8N6Y0 703 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 MYOM3Q5VTT5 1437 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 CACNA2D4Q7Z3S7 1137 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 ARHGAP5Q13017 1502 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 SPA17Q15506 151 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 KIF4BQ2VIQ3 1234 aa15.65■□□□□ 0.1
GSE1-202ENST00000393243 POLR3DP05423 398 aaPredicted RBP15.65■□□□□ 0.1
GSE1-202ENST00000393243 TXLNBQ8N3L3 684 aa15.64■□□□□ 0.09
GSE1-202ENST00000393243 GSTTP1A0A1W2PQM5 241 aa15.64■□□□□ 0.09
GSE1-202ENST00000393243 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
GSE1-202ENST00000393243 SPG7Q9UQ90 795 aa15.64■□□□□ 0.09
GSE1-202ENST00000393243 PANK2Q9BZ23 570 aa15.64■□□□□ 0.09
GSE1-202ENST00000393243 IFFO1Q0D2I5 559 aa15.64■□□□□ 0.09
GSE1-202ENST00000393243 GIMAP7Q8NHV1 300 aa15.64■□□□□ 0.09
GSE1-202ENST00000393243 C16orf45Q96MC5 204 aaPredicted RBP15.64■□□□□ 0.09
GSE1-202ENST00000393243 CCDC8Q9H0W5 538 aaPredicted RBP15.64■□□□□ 0.09
GSE1-202ENST00000393243 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.64■□□□□ 0.099e-7■■■□□ 18.7
GSE1-202ENST00000393243 SLC26A8Q96RN1 970 aa15.63■□□□□ 0.09
GSE1-202ENST00000393243 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
GSE1-202ENST00000393243 NUP88Q99567 741 aaPredicted RBP15.63■□□□□ 0.09
GSE1-202ENST00000393243 MKNK2Q9HBH9 465 aa15.63■□□□□ 0.09
GSE1-202ENST00000393243 ANKRD50Q9ULJ7 1429 aa15.63■□□□□ 0.09
GSE1-202ENST00000393243 WDR78Q5VTH9 848 aa15.63■□□□□ 0.09
GSE1-202ENST00000393243 PUS7Q96PZ0 661 aaKnown RBP15.63■□□□□ 0.09
GSE1-202ENST00000393243 SEC63Q9UGP8 760 aaKnown RBP15.63■□□□□ 0.09
GSE1-202ENST00000393243 FGD6Q6ZV73 1430 aa15.63■□□□□ 0.09
GSE1-202ENST00000393243 RANBP6O60518 1105 aaKnown RBP15.62■□□□□ 0.09
GSE1-202ENST00000393243 CLIP2Q9UDT6 1046 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 LUZP1Q86V48 1076 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 MYD88Q99836 296 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 IGHMBP2P38935 993 aaKnown RBP15.62■□□□□ 0.09
GSE1-202ENST00000393243 ZSWIM4Q9H7M6 989 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 INCENPQ9NQS7 918 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 CTNNA3Q9UI47 895 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 GPATCH11Q8N954 259 aa15.62■□□□□ 0.09
GSE1-202ENST00000393243 IPO4Q8TEX9 1081 aaKnown RBP15.62■□□□□ 0.09
GSE1-202ENST00000393243 SFPQP23246 707 aaKnown RBP eCLIP15.61■□□□□ 0.091e-6■■■□□ 16.1
GSE1-202ENST00000393243 PODXL2Q9NZ53 605 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 F6X3S4 739 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 SSFA2P28290 1259 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 TDRD12Q587J7 1177 aaKnown RBP15.61■□□□□ 0.09
GSE1-202ENST00000393243 CCDC91Q7Z6B0 441 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 ZSCAN31Q96LW9 406 aaPredicted RBP15.61■□□□□ 0.09
GSE1-202ENST00000393243 MMRN2Q9H8L6 949 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 USP25Q9UHP3 1055 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 TOP2AP11388 1531 aaKnown RBP15.61■□□□□ 0.09
GSE1-202ENST00000393243 TOP1P11387 765 aaKnown RBP15.61■□□□□ 0.09
GSE1-202ENST00000393243 DESP17661 470 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 TFIP11Q9UBB9 837 aaKnown RBP15.61■□□□□ 0.09
GSE1-202ENST00000393243 SHTN1A0MZ66 631 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 C20orf194Q5TEA3 1177 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 KIF5CO60282 957 aa15.61■□□□□ 0.09
GSE1-202ENST00000393243 CRACR2BQ8N4Y2 399 aaPredicted RBP15.61■□□□□ 0.09
GSE1-202ENST00000393243 PRPF4BQ13523 1007 aaKnown RBP15.6■□□□□ 0.09
GSE1-202ENST00000393243 CCDC96Q2M329 555 aa15.6■□□□□ 0.09
GSE1-202ENST00000393243 RBM27Q9P2N5 1060 aaKnown RBP15.6■□□□□ 0.09
GSE1-202ENST00000393243 CEP131Q9UPN4 1083 aa15.6■□□□□ 0.09
GSE1-202ENST00000393243 PRKCSHP14314 528 aaPredicted RBP15.6■□□□□ 0.09
GSE1-202ENST00000393243 VAT1LQ9HCJ6 419 aa15.6■□□□□ 0.09
GSE1-202ENST00000393243 ANKIB1Q9P2G1 1089 aa15.6■□□□□ 0.09
GSE1-202ENST00000393243 USP8P40818 1118 aa15.6■□□□□ 0.09
GSE1-202ENST00000393243 TERF1P54274 439 aa15.6■□□□□ 0.09
GSE1-202ENST00000393243 CADPSQ9ULU8 1353 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 TSHZ3Q63HK5 1081 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 NBPF8Q3BBV2 869 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 ATP2C2O75185 946 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 GTF2F1P35269 517 aaKnown RBP eCLIP15.59■□□□□ 0.094e-7■■■■□ 22
GSE1-202ENST00000393243 FKBP15Q5T1M5 1219 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 OSCARQ8IYS5 282 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 FAM107BQ9H098 131 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 ZHX1Q9UKY1 873 aaPredicted RBP15.59■□□□□ 0.09
GSE1-202ENST00000393243 WASF1Q92558 559 aa15.59■□□□□ 0.09
GSE1-202ENST00000393243 HLTFQ14527 1009 aaKnown RBP eCLIP15.58■□□□□ 0.09
GSE1-202ENST00000393243 POTEJP0CG39 1038 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 HSP90AA4PQ58FG1 418 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 C8orf76Q96K31 380 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 PRDM11Q9NQV5 511 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 TMCO5BA8MYB1 307 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 LARP1Q6PKG0 1096 aaKnown RBP15.58■□□□□ 0.08
GSE1-202ENST00000393243 CEP63Q96MT8 703 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 DUSP27Q5VZP5 1158 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 CGNQ9P2M7 1197 aaKnown RBP15.58■□□□□ 0.08
GSE1-202ENST00000393243 RRBP1Q9P2E9 1410 aaKnown RBP15.58■□□□□ 0.08
GSE1-202ENST00000393243 KRT32Q14532 448 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 TMC6Q7Z403 805 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 JARID2Q92833 1246 aaPredicted RBP15.58■□□□□ 0.08
GSE1-202ENST00000393243 NAPBQ9H115 298 aa15.58■□□□□ 0.08
GSE1-202ENST00000393243 RNF216Q9NWF9 866 aaPredicted RBP15.58■□□□□ 0.08
GSE1-202ENST00000393243 IFIT1P09914 478 aaKnown RBP15.57■□□□□ 0.08
GSE1-202ENST00000393243 ZSCAN30Q86W11 494 aa15.57■□□□□ 0.08
GSE1-202ENST00000393243 WDR63Q8IWG1 891 aa15.57■□□□□ 0.08
GSE1-202ENST00000393243 TSG101Q99816 390 aa15.57■□□□□ 0.08
GSE1-202ENST00000393243 PPP1R12BO60237 982 aaPredicted RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms