RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 EIF2S2P20042 333 aaKnown RBP22.29■■□□□ 1.16
SHTN1-203ENST00000392901 WDR17Q8IZU2 1322 aa22.29■■□□□ 1.16
SHTN1-203ENST00000392901 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.29■■□□□ 1.167e-7■■■■□ 20.9
SHTN1-203ENST00000392901 F6X3S4 739 aa22.28■■□□□ 1.16
SHTN1-203ENST00000392901 SLC4A10Q6U841 1118 aa22.28■■□□□ 1.16
SHTN1-203ENST00000392901 NPM2Q86SE8 214 aaKnown RBP22.28■■□□□ 1.16
SHTN1-203ENST00000392901 STRN4Q9NRL3 753 aa22.28■■□□□ 1.16
SHTN1-203ENST00000392901 C8orf34Q49A92 452 aa22.28■■□□□ 1.16
SHTN1-203ENST00000392901 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
SHTN1-203ENST00000392901 ANP32AP39687 249 aaKnown RBP22.27■■□□□ 1.16
SHTN1-203ENST00000392901 FLIIQ13045 1269 aa22.27■■□□□ 1.16
SHTN1-203ENST00000392901 OVOS2A0A0G2JMS6 1433 aa22.27■■□□□ 1.15
SHTN1-203ENST00000392901 EVA1CP58658 441 aa22.26■■□□□ 1.15
SHTN1-203ENST00000392901 FKBP5Q13451 457 aaPredicted RBP22.26■■□□□ 1.15
SHTN1-203ENST00000392901 FAM161AQ3B820 660 aa22.26■■□□□ 1.15
SHTN1-203ENST00000392901 VIRMAQ69YN4 1812 aaKnown RBP22.26■■□□□ 1.15
SHTN1-203ENST00000392901 COL5A2P05997 1499 aaPredicted RBP22.26■■□□□ 1.15
SHTN1-203ENST00000392901 KDM3BQ7LBC6 1761 aa22.25■■□□□ 1.15
SHTN1-203ENST00000392901 ABCA3Q99758 1704 aa22.25■■□□□ 1.15
SHTN1-203ENST00000392901 CYP27B1O15528 508 aa22.25■■□□□ 1.15
SHTN1-203ENST00000392901 ROBO1Q9Y6N7 1651 aa22.24■■□□□ 1.15
SHTN1-203ENST00000392901 LTBP4Q8N2S1 1624 aa22.24■■□□□ 1.15
SHTN1-203ENST00000392901 ANP32EQ9BTT0 268 aa22.24■■□□□ 1.15
SHTN1-203ENST00000392901 KDM6AO15550 1401 aaPredicted RBP22.23■■□□□ 1.15
SHTN1-203ENST00000392901 HOXB7P09629 217 aa22.23■■□□□ 1.15
SHTN1-203ENST00000392901 LARP1Q6PKG0 1096 aaKnown RBP22.23■■□□□ 1.15
SHTN1-203ENST00000392901 SMC5Q8IY18 1101 aa22.23■■□□□ 1.15
SHTN1-203ENST00000392901 NFATC2IPQ8NCF5 419 aa22.23■■□□□ 1.15
SHTN1-203ENST00000392901 SLC52A2Q9HAB3 445 aa22.23■■□□□ 1.15
SHTN1-203ENST00000392901 PHAXQ9H814 394 aaKnown RBP22.22■■□□□ 1.15
SHTN1-203ENST00000392901 SLC39A6Q13433 755 aa22.21■■□□□ 1.15
SHTN1-203ENST00000392901 SIRT2Q8IXJ6 389 aa22.21■■□□□ 1.15
SHTN1-203ENST00000392901 DCAF5Q96JK2 942 aa22.21■■□□□ 1.15
SHTN1-203ENST00000392901 CHPF2Q9P2E5 772 aa22.21■■□□□ 1.15
SHTN1-203ENST00000392901 IPO9Q96P70 1041 aaKnown RBP22.21■■□□□ 1.15
SHTN1-203ENST00000392901 MEIS3Q99687 375 aa22.21■■□□□ 1.15
SHTN1-203ENST00000392901 GIGYF1O75420 1035 aaPredicted RBP22.2■■□□□ 1.14
SHTN1-203ENST00000392901 CCT4P50991 539 aaKnown RBP22.2■■□□□ 1.14
SHTN1-203ENST00000392901 CARD10Q9BWT7 1032 aa22.2■■□□□ 1.14
SHTN1-203ENST00000392901 USP35Q9P2H5 1018 aa22.2■■□□□ 1.14
SHTN1-203ENST00000392901 PRAMEF22A3QJZ6 481 aa22.19■■□□□ 1.14
SHTN1-203ENST00000392901 ZCRB1Q8TBF4 217 aaKnown RBP22.19■■□□□ 1.14
SHTN1-203ENST00000392901 CHMP4AQ9BY43 222 aa22.19■■□□□ 1.14
SHTN1-203ENST00000392901 BTG4Q9NY30 223 aa22.19■■□□□ 1.14
SHTN1-203ENST00000392901 ADAMTS7Q9UKP4 1686 aa22.19■■□□□ 1.14
SHTN1-203ENST00000392901 PLEKHG2Q9H7P9 1386 aa22.19■■□□□ 1.14
SHTN1-203ENST00000392901 ZNF790Q6PG37 636 aa22.19■■□□□ 1.14
SHTN1-203ENST00000392901 ANXA1P04083 346 aa22.18■■□□□ 1.14
SHTN1-203ENST00000392901 HSP90AB1P08238 724 aaKnown RBP22.18■■□□□ 1.14
SHTN1-203ENST00000392901 IL2RBP14784 551 aa22.18■■□□□ 1.14
SHTN1-203ENST00000392901 SIPA1L3O60292 1781 aaPredicted RBP22.17■■□□□ 1.14
SHTN1-203ENST00000392901 SCN11AQ9UI33 1791 aa22.17■■□□□ 1.14
SHTN1-203ENST00000392901 CACNA1FO60840 1977 aa22.17■■□□□ 1.14
SHTN1-203ENST00000392901 PKD1L3Q7Z443 1732 aa22.16■■□□□ 1.14
SHTN1-203ENST00000392901 HEG1Q9ULI3 1381 aa22.16■■□□□ 1.14
SHTN1-203ENST00000392901 CABP4P57796 275 aa22.15■■□□□ 1.14
SHTN1-203ENST00000392901 GCC1Q96CN9 775 aa22.15■■□□□ 1.14
SHTN1-203ENST00000392901 PCDH11XQ9BZA7 1347 aa22.15■■□□□ 1.14
SHTN1-203ENST00000392901 PCDH11YQ9BZA8 1340 aa22.15■■□□□ 1.14
SHTN1-203ENST00000392901 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
SHTN1-203ENST00000392901 NUCB1Q02818 461 aa22.15■■□□□ 1.14
SHTN1-203ENST00000392901 DDX54Q8TDD1 881 aaKnown RBP22.15■■□□□ 1.14
SHTN1-203ENST00000392901 DBF4Q9UBU7 674 aaPredicted RBP22.15■■□□□ 1.14
SHTN1-203ENST00000392901 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
SHTN1-203ENST00000392901 LNPKQ9C0E8 428 aa22.14■■□□□ 1.13
SHTN1-203ENST00000392901 ANKRD45Q5TZF3 282 aa22.14■■□□□ 1.13
SHTN1-203ENST00000392901 CEP85Q6P2H3 762 aa22.13■■□□□ 1.13
SHTN1-203ENST00000392901 CHD1LQ86WJ1 897 aa22.12■■□□□ 1.13
SHTN1-203ENST00000392901 RPAP2Q8IXW5 612 aaPredicted RBP22.12■■□□□ 1.13
SHTN1-203ENST00000392901 TTC5Q8N0Z6 440 aa22.12■■□□□ 1.13
SHTN1-203ENST00000392901 ANKRD44Q8N8A2 993 aa22.12■■□□□ 1.13
SHTN1-203ENST00000392901 PARP4Q9UKK3 1724 aaKnown RBP22.12■■□□□ 1.13
SHTN1-203ENST00000392901 NOP58Q9Y2X3 529 aaKnown RBP22.12■■□□□ 1.13
SHTN1-203ENST00000392901 ERICH6Q7L0X2 663 aa22.12■■□□□ 1.13
SHTN1-203ENST00000392901 ATP10DQ9P241 1426 aa22.11■■□□□ 1.13
SHTN1-203ENST00000392901 PROSER3Q2NL68 480 aa22.11■■□□□ 1.13
SHTN1-203ENST00000392901 ZNF496Q96IT1 587 aaPredicted RBP22.11■■□□□ 1.13
SHTN1-203ENST00000392901 PI4KAP2A4QPH2 592 aa22.11■■□□□ 1.13
SHTN1-203ENST00000392901 PI4KAP1Q8N8J0 262 aa22.11■■□□□ 1.13
SHTN1-203ENST00000392901 TOM1O60784 492 aa22.09■■□□□ 1.13
SHTN1-203ENST00000392901 GNAI2P04899 355 aa22.09■■□□□ 1.13
SHTN1-203ENST00000392901 ZBTB47Q9UFB7 747 aaPredicted RBP22.09■■□□□ 1.13
SHTN1-203ENST00000392901 ADAMTS2O95450 1211 aa22.08■■□□□ 1.13
SHTN1-203ENST00000392901 SEC24BO95487 1268 aa22.08■■□□□ 1.13
SHTN1-203ENST00000392901 MRC1P22897 1456 aa22.08■■□□□ 1.12
SHTN1-203ENST00000392901 GNAI3P08754 354 aa22.08■■□□□ 1.12
SHTN1-203ENST00000392901 DNAAF4Q8WXU2 420 aa22.08■■□□□ 1.12
SHTN1-203ENST00000392901 DCTPP1Q9H773 170 aa22.08■■□□□ 1.12
SHTN1-203ENST00000392901 SRCIN1Q9C0H9 1055 aa22.07■■□□□ 1.12
SHTN1-203ENST00000392901 BCL11AQ9H165 835 aa22.07■■□□□ 1.12
SHTN1-203ENST00000392901 FMNL2Q96PY5 1086 aa22.06■■□□□ 1.12
SHTN1-203ENST00000392901 PXDNLA1KZ92 1463 aa22.06■■□□□ 1.12
SHTN1-203ENST00000392901 USP44Q9H0E7 712 aa22.06■■□□□ 1.12
SHTN1-203ENST00000392901 DDX21Q9NR30 783 aaKnown RBP eCLIP22.06■■□□□ 1.12
SHTN1-203ENST00000392901 HYPKQ9NX55 129 aa22.06■■□□□ 1.12
SHTN1-203ENST00000392901 SNRPA1P09661 255 aaKnown RBP22.05■■□□□ 1.12
SHTN1-203ENST00000392901 NKX1-1Q15270 411 aaPredicted RBP22.05■■□□□ 1.12
SHTN1-203ENST00000392901 USP16Q9Y5T5 823 aa22.05■■□□□ 1.12
SHTN1-203ENST00000392901 COL22A1Q8NFW1 1626 aaPredicted RBP22.05■■□□□ 1.12
SHTN1-203ENST00000392901 PHLPP1O60346 1717 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms