RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 CFAP57Q96MR6 1250 aa13.83□□□□□ -0.19
CIT-203ENST00000392521 EHMT1Q9H9B1 1298 aa13.83□□□□□ -0.2
CIT-203ENST00000392521 TMCO5BA8MYB1 307 aa13.83□□□□□ -0.2
CIT-203ENST00000392521 KRT32Q14532 448 aa13.83□□□□□ -0.2
CIT-203ENST00000392521 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
CIT-203ENST00000392521 RAB34Q9BZG1 259 aa13.83□□□□□ -0.2
CIT-203ENST00000392521 STARD3NLO95772 234 aa13.83□□□□□ -0.2
CIT-203ENST00000392521 UBXN4Q92575 508 aa13.83□□□□□ -0.2
CIT-203ENST00000392521 K7ELQ4 463 aaPredicted RBP13.82□□□□□ -0.2
CIT-203ENST00000392521 METTL24Q5JXM2 366 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 CASTP20810 708 aaKnown RBP13.82□□□□□ -0.2
CIT-203ENST00000392521 PTPRGP23470 1445 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 ARL1P40616 181 aaPredicted RBP13.82□□□□□ -0.2
CIT-203ENST00000392521 SPECC1Q5M775 1068 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 ZNF354CQ86Y25 554 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 PNISRQ8TF01 805 aaKnown RBP13.82□□□□□ -0.2
CIT-203ENST00000392521 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 TXNDC2Q86VQ3 553 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 DDX11Q96FC9 970 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 PUF60Q9UHX1 559 aaKnown RBP13.82□□□□□ -0.2
CIT-203ENST00000392521 HMGB2P26583 209 aaKnown RBP13.82□□□□□ -0.2
CIT-203ENST00000392521 MAP3K9P80192 1104 aa13.82□□□□□ -0.2
CIT-203ENST00000392521 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
CIT-203ENST00000392521 TMEM266Q2M3C6 531 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 ZNF444Q8N0Y2 327 aaPredicted RBP13.81□□□□□ -0.2
CIT-203ENST00000392521 SRGAP3O43295 1099 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 ZNF530Q6P9A1 599 aaPredicted RBP13.81□□□□□ -0.2
CIT-203ENST00000392521 PDZRN3Q9UPQ7 1066 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 CAMK4Q16566 473 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 RNF187Q5TA31 235 aaPredicted RBP13.81□□□□□ -0.2
CIT-203ENST00000392521 BCAR3O75815 825 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 CETN1Q12798 172 aa13.81□□□□□ -0.2
CIT-203ENST00000392521 TRMT1LQ7Z2T5 733 aaKnown RBP13.81□□□□□ -0.2
CIT-203ENST00000392521 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
CIT-203ENST00000392521 NUP88Q99567 741 aaPredicted RBP13.8□□□□□ -0.2
CIT-203ENST00000392521 U3KPZ7 1027 aaPredicted RBP13.8□□□□□ -0.2
CIT-203ENST00000392521 BMS1Q14692 1282 aaKnown RBP13.8□□□□□ -0.2
CIT-203ENST00000392521 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
CIT-203ENST00000392521 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
CIT-203ENST00000392521 SYCP3Q8IZU3 236 aa13.8□□□□□ -0.2
CIT-203ENST00000392521 PRPF4BQ13523 1007 aaKnown RBP13.79□□□□□ -0.2
CIT-203ENST00000392521 CCDC175P0C221 793 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 EXOSC9Q06265 439 aaKnown RBP13.79□□□□□ -0.2
CIT-203ENST00000392521 RGS22Q8NE09 1264 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 PPP1R14CQ8TAE6 165 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 PAFAH1B1P43034 410 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 USO1O60763 962 aaKnown RBP13.79□□□□□ -0.2
CIT-203ENST00000392521 HLTFQ14527 1009 aaKnown RBP eCLIP13.79□□□□□ -0.2
CIT-203ENST00000392521 TDRD12Q587J7 1177 aaKnown RBP13.79□□□□□ -0.2
CIT-203ENST00000392521 RAB3IL1Q8TBN0 382 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 CUX1P39880 1505 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 PRKCSHP14314 528 aaPredicted RBP13.79□□□□□ -0.2
CIT-203ENST00000392521 SREK1Q8WXA9 508 aaKnown RBP13.79□□□□□ -0.2
CIT-203ENST00000392521 SAMM50Q9Y512 469 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 LRSAM1Q6UWE0 723 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
CIT-203ENST00000392521 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 RPGRQ92834 1020 aaKnown RBP13.78□□□□□ -0.2
CIT-203ENST00000392521 LRRC45Q96CN5 670 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 NAPBQ9H115 298 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 KIF4BQ2VIQ3 1234 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 ADAMTS8Q9UP79 889 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 MICALCLQ6ZW33 695 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 AKAP2Q9Y2D5 859 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 SETD1BQ9UPS6 1966 aaKnown RBP13.78□□□□□ -0.2
CIT-203ENST00000392521 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
CIT-203ENST00000392521 ZSCAN12O43309 604 aa13.77□□□□□ -0.2
CIT-203ENST00000392521 BAG4O95429 457 aaKnown RBP13.77□□□□□ -0.2
CIT-203ENST00000392521 PTPN14Q15678 1187 aa13.77□□□□□ -0.2
CIT-203ENST00000392521 SPTY2D1Q68D10 685 aaPredicted RBP13.77□□□□□ -0.2
CIT-203ENST00000392521 NOP2P46087 812 aaKnown RBP13.77□□□□□ -0.2
CIT-203ENST00000392521 PRAM1Q96QH2 718 aa13.77□□□□□ -0.2
CIT-203ENST00000392521 PRDM11Q9NQV5 511 aa13.77□□□□□ -0.2
CIT-203ENST00000392521 TIGD1Q96MW7 591 aa13.77□□□□□ -0.2
CIT-203ENST00000392521 GRPEL1Q9HAV7 217 aa13.77□□□□□ -0.2
CIT-203ENST00000392521 RANBP6O60518 1105 aaKnown RBP13.77□□□□□ -0.21
CIT-203ENST00000392521 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
CIT-203ENST00000392521 PPP6R1Q9UPN7 881 aa13.77□□□□□ -0.21
CIT-203ENST00000392521 A0A087WZG4 1122 aa13.77□□□□□ -0.21
CIT-203ENST00000392521 IQCA1Q86XH1 822 aa13.77□□□□□ -0.21
CIT-203ENST00000392521 TMX1Q9H3N1 280 aa13.77□□□□□ -0.21
CIT-203ENST00000392521 TSR2Q969E8 191 aaKnown RBP13.76□□□□□ -0.21
CIT-203ENST00000392521 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
CIT-203ENST00000392521 TOP1P11387 765 aaKnown RBP13.76□□□□□ -0.21
CIT-203ENST00000392521 VTI1AQ96AJ9 217 aa13.76□□□□□ -0.21
CIT-203ENST00000392521 NAA15Q9BXJ9 866 aaKnown RBP13.76□□□□□ -0.21
CIT-203ENST00000392521 MPHOSPH6Q99547 160 aaKnown RBP13.76□□□□□ -0.21
CIT-203ENST00000392521 SFPQP23246 707 aaKnown RBP eCLIP13.76□□□□□ -0.21
CIT-203ENST00000392521 C6orf163Q5TEZ5 329 aa13.76□□□□□ -0.21
CIT-203ENST00000392521 SLF2Q8IX21 1173 aa13.76□□□□□ -0.21
CIT-203ENST00000392521 PRC1O43663 620 aa13.76□□□□□ -0.21
CIT-203ENST00000392521 CTCFLQ8NI51 663 aaPredicted RBP13.76□□□□□ -0.21
CIT-203ENST00000392521 CCDC82Q8N4S0 544 aa13.75□□□□□ -0.21
CIT-203ENST00000392521 CDK19Q9BWU1 502 aa13.75□□□□□ -0.21
CIT-203ENST00000392521 A0A1W2PRG0 241 aa13.75□□□□□ -0.21
CIT-203ENST00000392521 APBB1IPQ7Z5R6 666 aaPredicted RBP13.75□□□□□ -0.21
CIT-203ENST00000392521 CHD1LQ86WJ1 897 aa13.75□□□□□ -0.21
CIT-203ENST00000392521 ACTN2P35609 894 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms