RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 ZNF445P59923 1031 aa17.64■□□□□ 0.41
LRRFIP1-204ENST00000392000 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
LRRFIP1-204ENST00000392000 MYO5BQ9ULV0 1848 aa17.64■□□□□ 0.41
LRRFIP1-204ENST00000392000 CBX1P83916 185 aa17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 OS9Q13438 667 aaPredicted RBP17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 RPAP2Q8IXW5 612 aaPredicted RBP17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 STK31Q9BXU1 1019 aa17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 UNC5CLQ8IV45 518 aa17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 CWC22Q9HCG8 908 aaKnown RBP17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 CHL1O00533 1208 aa17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 CCDC39Q9UFE4 941 aa17.63■□□□□ 0.41
LRRFIP1-204ENST00000392000 ARHGEF40Q8TER5 1519 aa17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 VPS37CA5D8V6 355 aaPredicted RBP17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 LRRFIP2Q9Y608 721 aaKnown RBP17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 RTL1A6NKG5 1358 aa17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 USP48Q86UV5 1035 aa17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 CNPY2Q9Y2B0 182 aa17.62■□□□□ 0.41
LRRFIP1-204ENST00000392000 ZFYVE9O95405 1425 aa17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 TTC21BQ7Z4L5 1316 aa17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 FERMT3Q86UX7 667 aa17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 MAP3K19Q56UN5 1328 aa17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 SPG7Q9UQ90 795 aa17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 PTCH1Q13635 1447 aa17.61■□□□□ 0.41
LRRFIP1-204ENST00000392000 A0A0U1RQG5 324 aaPredicted RBP17.6■□□□□ 0.41
LRRFIP1-204ENST00000392000 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
LRRFIP1-204ENST00000392000 GIMAP6Q6P9H5 292 aa17.6■□□□□ 0.41
LRRFIP1-204ENST00000392000 MAP2P11137 1827 aaKnown RBP17.6■□□□□ 0.41
LRRFIP1-204ENST00000392000 KCNJ4P48050 445 aa17.6■□□□□ 0.41
LRRFIP1-204ENST00000392000 CPS1P31327 1500 aa17.6■□□□□ 0.41
LRRFIP1-204ENST00000392000 ALKQ9UM73 1620 aa17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 SURF6O75683 361 aaKnown RBP17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 GNAI2P04899 355 aa17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 NLRP6P59044 892 aa17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 CWC27Q6UX04 472 aaKnown RBP17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 NEURL4Q96JN8 1562 aa17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 DRC7Q8IY82 874 aa17.59■□□□□ 0.41
LRRFIP1-204ENST00000392000 MX1P20591 662 aa17.58■□□□□ 0.41
LRRFIP1-204ENST00000392000 CAMK4Q16566 473 aa17.58■□□□□ 0.41
LRRFIP1-204ENST00000392000 SYAP1Q96A49 352 aaPredicted RBP17.58■□□□□ 0.41
LRRFIP1-204ENST00000392000 LRRCC1Q9C099 1032 aa17.58■□□□□ 0.41
LRRFIP1-204ENST00000392000 TCEANC2Q96MN5 208 aa17.58■□□□□ 0.4
LRRFIP1-204ENST00000392000 IL25Q9H293 177 aa17.58■□□□□ 0.4
LRRFIP1-204ENST00000392000 PHAXQ9H814 394 aaKnown RBP17.58■□□□□ 0.4
LRRFIP1-204ENST00000392000 CCDC9Q9Y3X0 531 aaKnown RBP17.58■□□□□ 0.4
LRRFIP1-204ENST00000392000 MBD3O95983 291 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 ADCY5O95622 1261 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 FOSBP53539 338 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 FAM173BQ6P4H8 233 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 FLIIQ13045 1269 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 EYA1Q99502 592 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 ESYT1Q9BSJ8 1104 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 MED14O60244 1454 aa17.57■□□□□ 0.4
LRRFIP1-204ENST00000392000 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
LRRFIP1-204ENST00000392000 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
LRRFIP1-204ENST00000392000 EDC4Q6P2E9 1401 aaKnown RBP17.56■□□□□ 0.4
LRRFIP1-204ENST00000392000 USP32Q8NFA0 1604 aa17.55■□□□□ 0.4
LRRFIP1-204ENST00000392000 CYP2E1P05181 493 aaPredicted RBP17.55■□□□□ 0.4
LRRFIP1-204ENST00000392000 CSPP1Q1MSJ5 1256 aa17.55■□□□□ 0.4
LRRFIP1-204ENST00000392000 LMOD2Q6P5Q4 547 aa17.55■□□□□ 0.4
LRRFIP1-204ENST00000392000 CCDC83Q8IWF9 413 aa17.55■□□□□ 0.4
LRRFIP1-204ENST00000392000 PIK3R4Q99570 1358 aa17.54■□□□□ 0.4
LRRFIP1-204ENST00000392000 DIP2CQ9Y2E4 1556 aa17.54■□□□□ 0.4
LRRFIP1-204ENST00000392000 SASS6Q6UVJ0 657 aa17.54■□□□□ 0.4
LRRFIP1-204ENST00000392000 SMC3Q9UQE7 1217 aa17.54■□□□□ 0.4
LRRFIP1-204ENST00000392000 ATP10DQ9P241 1426 aa17.54■□□□□ 0.4
LRRFIP1-204ENST00000392000 LTKP29376 864 aa17.53■□□□□ 0.4
LRRFIP1-204ENST00000392000 NECAB1Q8N987 351 aa17.53■□□□□ 0.4
LRRFIP1-204ENST00000392000 ZNF592Q92610 1267 aa17.53■□□□□ 0.4
LRRFIP1-204ENST00000392000 SRCIN1Q9C0H9 1055 aa17.53■□□□□ 0.4
LRRFIP1-204ENST00000392000 CFAP74Q9C0B2 1584 aa17.52■□□□□ 0.4
LRRFIP1-204ENST00000392000 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.4
LRRFIP1-204ENST00000392000 CHMLP26374 656 aa17.52■□□□□ 0.39
LRRFIP1-204ENST00000392000 UBTFL1P0CB47 393 aaPredicted RBP17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 CKAP2LQ8IYA6 745 aa17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 STK3Q13188 491 aa17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 HDGFL1Q5TGJ6 251 aa17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 PDLIM2Q96JY6 352 aa17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 ZNF500O60304 480 aaPredicted RBP17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 BRD1O95696 1058 aa17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 CCT4P50991 539 aaKnown RBP17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 HAP1P54257 671 aaPredicted RBP17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 NOLC1Q14978 699 aaKnown RBP eCLIP17.51■□□□□ 0.39
LRRFIP1-204ENST00000392000 CASTP20810 708 aaKnown RBP17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 DNM1Q05193 864 aaKnown RBP17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 NAP1L2Q9ULW6 460 aaPredicted RBP17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 PTPRCP08575 1304 aa17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 SRGAP3O43295 1099 aa17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 CEBPZQ03701 1054 aaKnown RBP17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 ARHGAP31Q2M1Z3 1444 aa17.5■□□□□ 0.39
LRRFIP1-204ENST00000392000 GOLGA6L4A6NEF3 574 aa17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 PPP1R42Q7Z4L9 355 aa17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 TFIP11Q9UBB9 837 aaKnown RBP17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 KCNQ3O43525 872 aa17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 NPHP1O15259 732 aa17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 PHF14O94880 888 aa17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 CPSF1Q10570 1443 aaKnown RBP17.49■□□□□ 0.39
LRRFIP1-204ENST00000392000 TMEM131LA2VDJ0 1609 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms