RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 C1orf115Q9H7X2 142 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 TMEM51Q9NW97 253 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 MSH6P52701 1360 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 AATKQ6ZMQ8 1374 aa4.23□□□□□ -1.73
TRAV39-201ENST00000390466 IPO8O15397 1037 aaKnown RBP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 GADD45BO75293 160 aaPredicted RBP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 PRPF40AO75400 957 aaKnown RBP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 LETM1O95202 739 aaPredicted RBP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 U2AF1L5P0DN76 240 aaPredicted RBP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 SDSP20132 328 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 U2AF1Q01081 240 aaKnown RBP eCLIP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 ANKRD45Q5TZF3 282 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 INTS3Q68E01 1043 aaKnown RBP4.22□□□□□ -1.73
TRAV39-201ENST00000390466 KLHL34Q8N239 644 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 ANKRD44Q8N8A2 993 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 KIAA1524Q8TCG1 905 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 TSPY26PQ9H489 355 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 OSBPL3Q9H4L5 887 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 PYCARDQ9ULZ3 195 aa4.22□□□□□ -1.73
TRAV39-201ENST00000390466 RPGRIP1LQ68CZ1 1315 aa4.21□□□□□ -1.73
TRAV39-201ENST00000390466 ABCC6O95255 1503 aa4.21□□□□□ -1.73
TRAV39-201ENST00000390466 A0A0U1RQG5 324 aaPredicted RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 FYB1O15117 783 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 SMARCA5O60264 1052 aaPredicted RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 SLFN14P0C7P3 912 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 TNNT2P45379 298 aaPredicted RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 NCBP1Q09161 790 aaKnown RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 NOLC1Q14978 699 aaKnown RBP eCLIP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 SYCP1Q15431 976 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 NFE2L2Q16236 605 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 KRT24Q2M2I5 525 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 CEP85Q6P2H3 762 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 C16orf71Q8IYS4 520 aaPredicted RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 AFAP1Q8N556 730 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 RNF214Q8ND24 703 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 INTS4Q96HW7 963 aaKnown RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 TMX3Q96JJ7 454 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 IFT57Q9NWB7 429 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 CTNNA3Q9UI47 895 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 PALD1Q9ULE6 856 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 SIPA1L3O60292 1781 aaPredicted RBP4.21□□□□□ -1.74
TRAV39-201ENST00000390466 ADGRL3Q9HAR2 1447 aa4.21□□□□□ -1.74
TRAV39-201ENST00000390466 ADAMTSL3P82987 1691 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 DIP2AQ14689 1571 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 NWD1Q149M9 1564 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 CEP170BQ9Y4F5 1589 aaPredicted RBP4.2□□□□□ -1.74
TRAV39-201ENST00000390466 PXDNLA1KZ92 1463 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 FAM177BA6PVY3 158 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 RIOK3O14730 519 aaKnown RBP4.2□□□□□ -1.74
TRAV39-201ENST00000390466 GABPB1Q06547 395 aaPredicted RBP4.2□□□□□ -1.74
TRAV39-201ENST00000390466 ST3GAL1Q11201 340 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 FAM184AQ8NB25 1140 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 FBXO41Q8TF61 875 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 ANP32BQ92688 251 aaKnown RBP4.2□□□□□ -1.74
TRAV39-201ENST00000390466 PHACTR3Q96KR7 559 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 TTC14Q96N46 770 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 IL25Q9H293 177 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 TTC12Q9H892 705 aaPredicted RBP4.2□□□□□ -1.74
TRAV39-201ENST00000390466 MBIPQ9NS73 344 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 USP25Q9UHP3 1055 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 TRAK1Q9UPV9 953 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 CRB1P82279 1406 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 EVC2Q86UK5 1308 aa4.2□□□□□ -1.74
TRAV39-201ENST00000390466 RGPD8O14715 1765 aaPredicted RBP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 ARHGEF10O15013 1369 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 PARP4Q9UKK3 1724 aaKnown RBP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 TULP2O00295 520 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 KIF3BO15066 747 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 ERC2O15083 957 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 FCHSD2O94868 740 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 ADCY5O95622 1261 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 U2AF2P26368 475 aaKnown RBP eCLIP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 ANAPC15P60006 121 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 CBX1P83916 185 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 SLC20A2Q08357 652 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 CCDC183Q5T5S1 534 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 TMEM132EQ6IEE7 984 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 RBM43Q6ZSC3 357 aaKnown RBP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 C8orf58Q8NAV2 365 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 CFAP44Q96MT7 982 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 ZNF830Q96NB3 372 aaPredicted RBP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 ESYT1Q9BSJ8 1104 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 THUMPD2Q9BTF0 503 aaKnown RBP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 GGNBP2Q9H3C7 697 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 DDX41Q9UJV9 622 aaKnown RBP4.19□□□□□ -1.74
TRAV39-201ENST00000390466 KIF3AQ9Y496 699 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 MYH13Q9UKX3 1938 aa4.19□□□□□ -1.74
TRAV39-201ENST00000390466 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 SETD1BQ9UPS6 1966 aaKnown RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 RGPD2P0DJD1 1756 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 EPB41L2O43491 1005 aaKnown RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 ST18O60284 1047 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 DIAPH1O60610 1272 aaKnown RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 KDM4AO75164 1064 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 REC8O95072 547 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 HCLS1P14317 486 aaPredicted RBP4.18□□□□□ -1.74
TRAV39-201ENST00000390466 CAPN2P17655 700 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 PRKAR2BP31323 418 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 IL13P35225 146 aa4.18□□□□□ -1.74
TRAV39-201ENST00000390466 PDE1AP54750 535 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms