RNA–Protein interactions for RNA: ENST00000390464.2

TRAV38-1-201, Transcript of T cell receptor alpha variable 38-1, humanhuman

APPRIS P1 BASIC

Gene TRAV38-1, Length 353 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1-201ENST00000390464 ZNF831Q5JPB2 1677 aa9.74□□□□□ -0.85
TRAV38-1-201ENST00000390464 CYP27B1O15528 508 aa9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 KCNQ4P56696 695 aa9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 C1orf141Q5JVX7 400 aa9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 PELP1Q8IZL8 1130 aaKnown RBP9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 EYA1Q99502 592 aa9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 MAP3K5Q99683 1374 aa9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 COL5A3P25940 1745 aaPredicted RBP9.73□□□□□ -0.85
TRAV38-1-201ENST00000390464 EIF4A2Q14240 407 aaKnown RBP9.72□□□□□ -0.85
TRAV38-1-201ENST00000390464 GPR162Q16538 588 aa9.72□□□□□ -0.85
TRAV38-1-201ENST00000390464 PLEKHO1Q53GL0 409 aaPredicted RBP9.72□□□□□ -0.85
TRAV38-1-201ENST00000390464 SYT17Q9BSW7 474 aa9.72□□□□□ -0.85
TRAV38-1-201ENST00000390464 AMOTQ4VCS5 1084 aa9.71□□□□□ -0.86
TRAV38-1-201ENST00000390464 IGSF1Q8N6C5 1336 aa9.71□□□□□ -0.86
TRAV38-1-201ENST00000390464 PHF14O94880 888 aa9.7□□□□□ -0.86
TRAV38-1-201ENST00000390464 PHKG2P15735 406 aa9.7□□□□□ -0.86
TRAV38-1-201ENST00000390464 NKX1-1Q15270 411 aaPredicted RBP9.7□□□□□ -0.86
TRAV38-1-201ENST00000390464 ZNF530Q6P9A1 599 aaPredicted RBP9.7□□□□□ -0.86
TRAV38-1-201ENST00000390464 C4AP0C0L4 1744 aa9.69□□□□□ -0.86
TRAV38-1-201ENST00000390464 KIF7Q2M1P5 1343 aa9.69□□□□□ -0.86
TRAV38-1-201ENST00000390464 PIGBQ92521 554 aa9.69□□□□□ -0.86
TRAV38-1-201ENST00000390464 DCAF5Q96JK2 942 aa9.69□□□□□ -0.86
TRAV38-1-201ENST00000390464 SGIP1Q9BQI5 828 aa9.69□□□□□ -0.86
TRAV38-1-201ENST00000390464 LOC102724428A0A0B4J2F2 783 aa9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 ATP6V1AP38606 617 aa9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 SIK1P57059 783 aa9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 CABP4P57796 275 aa9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 MSL1Q68DK7 614 aa9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 POTEHQ6S545 545 aa9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 COL23A1Q86Y22 540 aaPredicted RBP9.68□□□□□ -0.86
TRAV38-1-201ENST00000390464 ERVV-2B6SEH9 535 aa9.67□□□□□ -0.86
TRAV38-1-201ENST00000390464 GNPATO15228 680 aa9.67□□□□□ -0.86
TRAV38-1-201ENST00000390464 SSFA2P28290 1259 aa9.67□□□□□ -0.86
TRAV38-1-201ENST00000390464 MTHFSP49914 203 aa9.67□□□□□ -0.86
TRAV38-1-201ENST00000390464 SULT6B1Q6IMI4 303 aa9.67□□□□□ -0.86
TRAV38-1-201ENST00000390464 MYH14Q7Z406 1995 aaKnown RBP9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 KIF13BQ9NQT8 1826 aa9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 TJP1Q07157 1748 aa9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 CC2D1BQ5T0F9 858 aaKnown RBP9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 ASAP1Q9ULH1 1129 aa9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 CICQ96RK0 1608 aaPredicted RBP9.66□□□□□ -0.86
TRAV38-1-201ENST00000390464 N4BP2Q86UW6 1770 aaPredicted RBP9.65□□□□□ -0.86
TRAV38-1-201ENST00000390464 GRIN3BO60391 1043 aa9.65□□□□□ -0.86
TRAV38-1-201ENST00000390464 CNGB1Q14028 1251 aaPredicted RBP9.65□□□□□ -0.86
TRAV38-1-201ENST00000390464 RTCBQ9Y3I0 505 aaKnown RBP9.65□□□□□ -0.86
TRAV38-1-201ENST00000390464 KDRP35968 1356 aa9.64□□□□□ -0.87
TRAV38-1-201ENST00000390464 DIAPH1O60610 1272 aaKnown RBP9.64□□□□□ -0.87
TRAV38-1-201ENST00000390464 LINC00116Q8NCU8 138 aa9.64□□□□□ -0.87
TRAV38-1-201ENST00000390464 CFAP53Q96M91 514 aa9.64□□□□□ -0.87
TRAV38-1-201ENST00000390464 CD2APQ9Y5K6 639 aa9.64□□□□□ -0.87
TRAV38-1-201ENST00000390464 KDM6AO15550 1401 aaPredicted RBP9.64□□□□□ -0.87
TRAV38-1-201ENST00000390464 UBR2Q8IWV8 1755 aa9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 MKRN4PQ13434 485 aaPredicted RBP9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 AKAP4Q5JQC9 854 aa9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 AMER1Q5JTC6 1135 aaPredicted RBP9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 TRAPPC3LQ5T215 181 aa9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 AEBP1Q8IUX7 1158 aa9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 ATG3Q9NT62 314 aa9.63□□□□□ -0.87
TRAV38-1-201ENST00000390464 ARFGEF1Q9Y6D6 1849 aa9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 U2SURPO15042 1029 aaKnown RBP9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 PTCD1O75127 700 aaKnown RBP9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 HMOX1P09601 288 aa9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 IL13P35225 146 aa9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 RFC4P35249 363 aa9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 NLGN2Q8NFZ4 835 aa9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 SIPA1L3O60292 1781 aaPredicted RBP9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 NPC1L1Q9UHC9 1359 aa9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 BRCA1P38398 1863 aaKnown RBP9.62□□□□□ -0.87
TRAV38-1-201ENST00000390464 ADAMTS7Q9UKP4 1686 aa9.61□□□□□ -0.87
TRAV38-1-201ENST00000390464 CNTNAP4Q9C0A0 1308 aa9.61□□□□□ -0.87
TRAV38-1-201ENST00000390464 MRC1P22897 1456 aa9.61□□□□□ -0.87
TRAV38-1-201ENST00000390464 ITPK1Q13572 414 aa9.61□□□□□ -0.87
TRAV38-1-201ENST00000390464 RC3H1Q5TC82 1133 aaKnown RBP9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 TTC5Q8N0Z6 440 aa9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 NLGN1Q8N2Q7 840 aa9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 ZNF784Q8NCA9 323 aaPredicted RBP9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 NFATC2IPQ8NCF5 419 aa9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 NUDCQ9Y266 331 aa9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 PARP3Q9Y6F1 533 aa9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 AFDNP55196 1824 aaKnown RBP9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 DLG5Q8TDM6 1919 aa9.6□□□□□ -0.87
TRAV38-1-201ENST00000390464 NEFMP07197 916 aa9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 MMP10P09238 476 aa9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 TEFQ10587 303 aa9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 NPM2Q86SE8 214 aaKnown RBP9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 GAS2L2Q8NHY3 880 aa9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 SLC52A2Q9HAB3 445 aa9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 CCDC87Q9NVE4 849 aa9.59□□□□□ -0.87
TRAV38-1-201ENST00000390464 CACNA1SQ13698 1873 aa9.58□□□□□ -0.88
TRAV38-1-201ENST00000390464 ZPR1O75312 459 aa9.58□□□□□ -0.88
TRAV38-1-201ENST00000390464 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
TRAV38-1-201ENST00000390464 RPS6KA4O75676 772 aa9.58□□□□□ -0.88
TRAV38-1-201ENST00000390464 KIAA1551Q9HCM1 1747 aa9.58□□□□□ -0.88
TRAV38-1-201ENST00000390464 DLEC1Q9Y238 1755 aa9.58□□□□□ -0.88
TRAV38-1-201ENST00000390464 YBX3P16989 372 aaKnown RBP eCLIP9.57□□□□□ -0.88
TRAV38-1-201ENST00000390464 CRKLP46109 303 aaKnown RBP9.57□□□□□ -0.88
TRAV38-1-201ENST00000390464 SMIM5Q71RC9 77 aa9.57□□□□□ -0.88
TRAV38-1-201ENST00000390464 COL3A1P02461 1466 aaPredicted RBP9.57□□□□□ -0.88
TRAV38-1-201ENST00000390464 SCN7AQ01118 1682 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms