RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 DSC3Q14574 896 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 TSGA10IPQ3SY00 556 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 HELQQ8TDG4 1101 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 BCCIPQ9P287 314 aaKnown RBP eCLIP8.88□□□□□ -0.99
TRAV35-201ENST00000390462 DMGDHQ9UI17 866 aaKnown RBP8.88□□□□□ -0.99
TRAV35-201ENST00000390462 VPS9D1Q9Y2B5 631 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 INPP5FQ9Y2H2 1132 aa8.88□□□□□ -0.99
TRAV35-201ENST00000390462 LGR5O75473 907 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 WEE1P30291 646 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 ATP6V1AP38606 617 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 PDE3BQ13370 1112 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 FKBP5Q13451 457 aaPredicted RBP8.87□□□□□ -0.99
TRAV35-201ENST00000390462 BMS1Q14692 1282 aaKnown RBP8.87□□□□□ -0.99
TRAV35-201ENST00000390462 TAF7LQ5H9L4 462 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 TPCN2Q8NHX9 752 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 CITED4Q96RK1 184 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 GPSM3Q9Y4H4 160 aa8.87□□□□□ -0.99
TRAV35-201ENST00000390462 STK10O94804 968 aaKnown RBP8.86□□□□□ -0.99
TRAV35-201ENST00000390462 SAMD7Q7Z3H4 446 aa8.86□□□□□ -0.99
TRAV35-201ENST00000390462 LAPTM4BQ86VI4 370 aa8.86□□□□□ -0.99
TRAV35-201ENST00000390462 TMC1Q8TDI8 760 aa8.86□□□□□ -0.99
TRAV35-201ENST00000390462 MAP4K4O95819 1239 aaPredicted RBP8.85□□□□□ -0.99
TRAV35-201ENST00000390462 CFHP08603 1231 aa8.85□□□□□ -0.99
TRAV35-201ENST00000390462 PTK2Q05397 1052 aa8.85□□□□□ -0.99
TRAV35-201ENST00000390462 EHHADHQ08426 723 aa8.85□□□□□ -0.99
TRAV35-201ENST00000390462 HSP90AB2PQ58FF8 381 aa8.85□□□□□ -0.99
TRAV35-201ENST00000390462 MAGEC2Q9UBF1 373 aaPredicted RBP8.85□□□□□ -0.99
TRAV35-201ENST00000390462 COL4A3BPQ9Y5P4 624 aa8.85□□□□□ -0.99
TRAV35-201ENST00000390462 MRPL42Q9Y6G3 142 aaKnown RBP8.85□□□□□ -0.99
TRAV35-201ENST00000390462 F12P00748 615 aaPredicted RBP8.84□□□□□ -0.99
TRAV35-201ENST00000390462 EMP3P54852 163 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 ATP2B2Q01814 1243 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 NAA30Q147X3 362 aaPredicted RBP8.84□□□□□ -0.99
TRAV35-201ENST00000390462 VPS37DQ86XT2 251 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 ZNF654Q8IZM8 581 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 ZNF687Q8N1G0 1237 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 COL26A1Q96A83 441 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 PRKD2Q9BZL6 878 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 NBPF3Q9H094 633 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 CHPF2Q9P2E5 772 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 DOLKQ9UPQ8 538 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 EMILIN1Q9Y6C2 1016 aa8.84□□□□□ -0.99
TRAV35-201ENST00000390462 NFE2L2Q16236 605 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 MCF2L2Q86YR7 1114 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 MORC4Q8TE76 937 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 MRFAP1L1Q96HT8 127 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 DMRTB1Q96MA1 342 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 PURBQ96QR8 312 aaKnown RBP8.83□□□□□ -1
TRAV35-201ENST00000390462 DDX41Q9UJV9 622 aaKnown RBP8.83□□□□□ -1
TRAV35-201ENST00000390462 WWC3Q9ULE0 1092 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 FAN1Q9Y2M0 1017 aa8.83□□□□□ -1
TRAV35-201ENST00000390462 BHMG1C9JSJ3 638 aaPredicted RBP8.82□□□□□ -1
TRAV35-201ENST00000390462 ST18O60284 1047 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 RNF40O75150 1001 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 OXLD1Q5BKU9 147 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 PDXDC2PQ6P474 469 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 CCDC85AQ96PX6 553 aaPredicted RBP8.82□□□□□ -1
TRAV35-201ENST00000390462 PCDH12Q9NPG4 1184 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 IFT57Q9NWB7 429 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 MAP10Q9P2G4 905 aa8.82□□□□□ -1
TRAV35-201ENST00000390462 PEX14O75381 377 aa8.81□□□□□ -1
TRAV35-201ENST00000390462 XRCC5P13010 732 aaKnown RBP8.81□□□□□ -1
TRAV35-201ENST00000390462 MPSTP25325 297 aa8.81□□□□□ -1
TRAV35-201ENST00000390462 Q3C1V9 767 aa8.81□□□□□ -1
TRAV35-201ENST00000390462 FILIP1Q7Z7B0 1213 aa8.81□□□□□ -1
TRAV35-201ENST00000390462 OCSTAMPQ9BR26 566 aa8.81□□□□□ -1
TRAV35-201ENST00000390462 PCDHGA11Q9Y5H2 935 aa8.81□□□□□ -1
TRAV35-201ENST00000390462 TK2O00142 265 aa8.8□□□□□ -1
TRAV35-201ENST00000390462 RACK1P63244 317 aaKnown RBP8.8□□□□□ -1
TRAV35-201ENST00000390462 KMT5BQ4FZB7 885 aa8.8□□□□□ -1
TRAV35-201ENST00000390462 MARVELD3Q96A59 401 aa8.8□□□□□ -1
TRAV35-201ENST00000390462 ZFRQ96KR1 1074 aaKnown RBP8.8□□□□□ -1
TRAV35-201ENST00000390462 CCDC194A0A1B0GVG4 234 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 FAM205CA6NFA0 338 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 FGRP09769 529 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 PLEKHG6Q3KR16 790 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 ZNF394Q53GI3 561 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 SETDB2Q96T68 719 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 CYLDQ9NQC7 956 aa8.79□□□□□ -1
TRAV35-201ENST00000390462 ENPP3O14638 875 aa8.78□□□□□ -1
TRAV35-201ENST00000390462 IGHA2P01877 340 aa8.78□□□□□ -1
TRAV35-201ENST00000390462 LHX8Q68G74 356 aa8.78□□□□□ -1
TRAV35-201ENST00000390462 TSEN2Q8NCE0 465 aaKnown RBP8.78□□□□□ -1
TRAV35-201ENST00000390462 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
TRAV35-201ENST00000390462 PCDHGB7Q9Y5F8 929 aa8.78□□□□□ -1
TRAV35-201ENST00000390462 EIF4G1Q04637 1599 aaKnown RBP8.78□□□□□ -1
TRAV35-201ENST00000390462 K7ELQ4 463 aaPredicted RBP8.77□□□□□ -1.01
TRAV35-201ENST00000390462 M0R2N6 131 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 DNAJC6O75061 913 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 MORN1Q5T089 497 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 ALG1LQ6GMV1 187 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 MRPL50Q8N5N7 158 aaKnown RBP8.77□□□□□ -1.01
TRAV35-201ENST00000390462 ADAM32Q8TC27 787 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 FAM129BQ96TA1 746 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.77□□□□□ -1.01
TRAV35-201ENST00000390462 IRF2BPLQ9H1B7 796 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 CCDC87Q9NVE4 849 aa8.77□□□□□ -1.01
TRAV35-201ENST00000390462 GPR182O15218 404 aa8.76□□□□□ -1.01
TRAV35-201ENST00000390462 ACTN4O43707 911 aaKnown RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms