RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 CD2BP2O95400 341 aaKnown RBP18.46■□□□□ 0.55
SCFD2-201ENST00000388940 ATP8B2P98198 1209 aa18.46■□□□□ 0.55
SCFD2-201ENST00000388940 TUBGCP6Q96RT7 1819 aa18.46■□□□□ 0.54
SCFD2-201ENST00000388940 KDM3BQ7LBC6 1761 aa18.45■□□□□ 0.54
SCFD2-201ENST00000388940 RAB3GAP1Q15042 981 aa18.45■□□□□ 0.54
SCFD2-201ENST00000388940 C14orf37Q86TY3 774 aa18.45■□□□□ 0.54
SCFD2-201ENST00000388940 BRPF3Q9ULD4 1205 aa18.45■□□□□ 0.54
SCFD2-201ENST00000388940 LMO7Q8WWI1 1683 aa18.45■□□□□ 0.54
SCFD2-201ENST00000388940 L1TD1Q5T7N2 865 aaKnown RBP18.45■□□□□ 0.54
SCFD2-201ENST00000388940 RBM42Q9BTD8 480 aaKnown RBP18.45■□□□□ 0.54
SCFD2-201ENST00000388940 CHMP4AQ9BY43 222 aa18.45■□□□□ 0.54
SCFD2-201ENST00000388940 HOXB7P09629 217 aa18.44■□□□□ 0.54
SCFD2-201ENST00000388940 TRHP20396 242 aaPredicted RBP18.44■□□□□ 0.54
SCFD2-201ENST00000388940 PDE1AP54750 535 aa18.44■□□□□ 0.54
SCFD2-201ENST00000388940 PSME1Q06323 249 aa18.44■□□□□ 0.54
SCFD2-201ENST00000388940 SALL3Q9BXA9 1300 aa18.44■□□□□ 0.54
SCFD2-201ENST00000388940 ADAMTSL3P82987 1691 aa18.44■□□□□ 0.54
SCFD2-201ENST00000388940 APBB1O00213 710 aa18.43■□□□□ 0.54
SCFD2-201ENST00000388940 NBPF6Q5VWK0 638 aa18.43■□□□□ 0.54
SCFD2-201ENST00000388940 NBPF4Q96M43 638 aa18.43■□□□□ 0.54
SCFD2-201ENST00000388940 USHBP1Q8N6Y0 703 aa18.43■□□□□ 0.54
SCFD2-201ENST00000388940 RGPD2P0DJD1 1756 aa18.43■□□□□ 0.54
SCFD2-201ENST00000388940 TRAK2O60296 914 aa18.42■□□□□ 0.54
SCFD2-201ENST00000388940 REC8O95072 547 aa18.42■□□□□ 0.54
SCFD2-201ENST00000388940 TNPO1Q92973 898 aaKnown RBP18.42■□□□□ 0.54
SCFD2-201ENST00000388940 ESCO1Q5FWF5 840 aa18.42■□□□□ 0.54
SCFD2-201ENST00000388940 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
SCFD2-201ENST00000388940 LRRCC1Q9C099 1032 aa18.42■□□□□ 0.54
SCFD2-201ENST00000388940 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
SCFD2-201ENST00000388940 NCAPD2Q15021 1401 aa18.42■□□□□ 0.54
SCFD2-201ENST00000388940 SLIT3O75094 1523 aa18.41■□□□□ 0.54
SCFD2-201ENST00000388940 HSP90AA1P07900 732 aaKnown RBP18.41■□□□□ 0.54
SCFD2-201ENST00000388940 PTMSP20962 102 aa18.41■□□□□ 0.54
SCFD2-201ENST00000388940 GBP4Q96PP9 640 aa18.41■□□□□ 0.54
SCFD2-201ENST00000388940 USP44Q9H0E7 712 aa18.41■□□□□ 0.54
SCFD2-201ENST00000388940 EIF4A1P60842 406 aaKnown RBP18.4■□□□□ 0.54
SCFD2-201ENST00000388940 NECTIN2Q92692 538 aa18.4■□□□□ 0.54
SCFD2-201ENST00000388940 EXOC6BQ9Y2D4 811 aa18.4■□□□□ 0.54
SCFD2-201ENST00000388940 NPHP4O75161 1426 aaPredicted RBP18.4■□□□□ 0.54
SCFD2-201ENST00000388940 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.54
SCFD2-201ENST00000388940 ERC2O15083 957 aa18.39■□□□□ 0.54
SCFD2-201ENST00000388940 AKAP4Q5JQC9 854 aa18.39■□□□□ 0.54
SCFD2-201ENST00000388940 FSD2A1L4K1 749 aa18.39■□□□□ 0.53
SCFD2-201ENST00000388940 CLEC17AQ6ZS10 378 aa18.39■□□□□ 0.53
SCFD2-201ENST00000388940 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
SCFD2-201ENST00000388940 PLEKHO1Q53GL0 409 aaPredicted RBP18.38■□□□□ 0.53
SCFD2-201ENST00000388940 SRCIN1Q9C0H9 1055 aa18.38■□□□□ 0.53
SCFD2-201ENST00000388940 AMOTQ4VCS5 1084 aa18.38■□□□□ 0.53
SCFD2-201ENST00000388940 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
SCFD2-201ENST00000388940 LGR6Q9HBX8 967 aa18.38■□□□□ 0.53
SCFD2-201ENST00000388940 LRRFIP2Q9Y608 721 aaKnown RBP18.38■□□□□ 0.53
SCFD2-201ENST00000388940 CAMTA1Q9Y6Y1 1673 aa18.38■□□□□ 0.53
SCFD2-201ENST00000388940 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
SCFD2-201ENST00000388940 AOX1Q06278 1338 aa18.37■□□□□ 0.53
SCFD2-201ENST00000388940 UBTFL1P0CB47 393 aaPredicted RBP18.37■□□□□ 0.53
SCFD2-201ENST00000388940 ARHGEF25Q86VW2 580 aa18.37■□□□□ 0.53
SCFD2-201ENST00000388940 MX1P20591 662 aa18.37■□□□□ 0.53
SCFD2-201ENST00000388940 RBM33Q96EV2 1170 aaKnown RBP18.37■□□□□ 0.53
SCFD2-201ENST00000388940 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
SCFD2-201ENST00000388940 TRPM3Q9HCF6 1732 aaPredicted RBP18.36■□□□□ 0.53
SCFD2-201ENST00000388940 GCP02774 474 aa18.35■□□□□ 0.53
SCFD2-201ENST00000388940 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
SCFD2-201ENST00000388940 GOLGA6L3A6NEY3 463 aa18.35■□□□□ 0.53
SCFD2-201ENST00000388940 RAB11FIP3O75154 756 aa18.35■□□□□ 0.53
SCFD2-201ENST00000388940 LMTK3Q96Q04 1460 aa18.35■□□□□ 0.53
SCFD2-201ENST00000388940 ST18O60284 1047 aa18.34■□□□□ 0.53
SCFD2-201ENST00000388940 POLA2Q14181 598 aa18.34■□□□□ 0.53
SCFD2-201ENST00000388940 ZNF530Q6P9A1 599 aaPredicted RBP18.34■□□□□ 0.53
SCFD2-201ENST00000388940 ISY1Q9ULR0 285 aaKnown RBP18.34■□□□□ 0.53
SCFD2-201ENST00000388940 TEFQ10587 303 aa18.34■□□□□ 0.53
SCFD2-201ENST00000388940 MST1RQ04912 1400 aa18.33■□□□□ 0.53
SCFD2-201ENST00000388940 KIF1AQ12756 1690 aa18.33■□□□□ 0.53
SCFD2-201ENST00000388940 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
SCFD2-201ENST00000388940 ORAI2Q96SN7 254 aa18.33■□□□□ 0.52
SCFD2-201ENST00000388940 ESYT1Q9BSJ8 1104 aa18.33■□□□□ 0.52
SCFD2-201ENST00000388940 CWC22Q9HCG8 908 aaKnown RBP18.33■□□□□ 0.52
SCFD2-201ENST00000388940 FOXD4L1Q9NU39 408 aa18.33■□□□□ 0.52
SCFD2-201ENST00000388940 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
SCFD2-201ENST00000388940 RNMTO43148 476 aaKnown RBP18.32■□□□□ 0.52
SCFD2-201ENST00000388940 EIF2S2P20042 333 aaKnown RBP18.32■□□□□ 0.52
SCFD2-201ENST00000388940 BEND3Q5T5X7 828 aa18.32■□□□□ 0.52
SCFD2-201ENST00000388940 NUCB2P80303 420 aa18.31■□□□□ 0.52
SCFD2-201ENST00000388940 DNAAF4Q8WXU2 420 aa18.31■□□□□ 0.52
SCFD2-201ENST00000388940 CHPF2Q9P2E5 772 aa18.31■□□□□ 0.52
SCFD2-201ENST00000388940 SIPA1L3O60292 1781 aaPredicted RBP18.31■□□□□ 0.52
SCFD2-201ENST00000388940 ADAMTS7Q9UKP4 1686 aa18.31■□□□□ 0.52
SCFD2-201ENST00000388940 HEG1Q9ULI3 1381 aa18.31■□□□□ 0.52
SCFD2-201ENST00000388940 EPB41L2O43491 1005 aaKnown RBP18.31■□□□□ 0.52
SCFD2-201ENST00000388940 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
SCFD2-201ENST00000388940 KCNQ3O43525 872 aa18.3■□□□□ 0.52
SCFD2-201ENST00000388940 CHMLP26374 656 aa18.3■□□□□ 0.52
SCFD2-201ENST00000388940 SSFA2P28290 1259 aa18.3■□□□□ 0.52
SCFD2-201ENST00000388940 C1orf141Q5JVX7 400 aa18.3■□□□□ 0.52
SCFD2-201ENST00000388940 PPP1R42Q7Z4L9 355 aa18.3■□□□□ 0.52
SCFD2-201ENST00000388940 GZF1Q9H116 711 aaPredicted RBP18.3■□□□□ 0.52
SCFD2-201ENST00000388940 CYP2E1P05181 493 aaPredicted RBP18.3■□□□□ 0.52
SCFD2-201ENST00000388940 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
SCFD2-201ENST00000388940 PXDNQ92626 1479 aa18.29■□□□□ 0.52
SCFD2-201ENST00000388940 ZBTB7CA1YPR0 619 aa18.29■□□□□ 0.52
SCFD2-201ENST00000388940 XRCC6P12956 609 aaKnown RBP eCLIP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms