RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 V9GY48 417 aaPredicted RBP9.26□□□□□ -0.93
RNU6-40P-201ENST00000384254 TNS4Q8IZW8 715 aa9.25□□□□□ -0.93
RNU6-40P-201ENST00000384254 CYP4X1Q8N118 509 aa9.25□□□□□ -0.93
RNU6-40P-201ENST00000384254 GAS2L2Q8NHY3 880 aa9.25□□□□□ -0.93
RNU6-40P-201ENST00000384254 ARHGEF10LQ9HCE6 1279 aa9.25□□□□□ -0.93
RNU6-40P-201ENST00000384254 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.25□□□□□ -0.93
RNU6-40P-201ENST00000384254 EGFL7Q9UHF1 273 aa9.25□□□□□ -0.93
RNU6-40P-201ENST00000384254 STAU1O95793 577 aaKnown RBP9.24□□□□□ -0.93
RNU6-40P-201ENST00000384254 ADH1AP07327 375 aa9.24□□□□□ -0.93
RNU6-40P-201ENST00000384254 RAB6BQ9NRW1 208 aa9.24□□□□□ -0.93
RNU6-40P-201ENST00000384254 SCNN1AP37088 669 aa9.23□□□□□ -0.93
RNU6-40P-201ENST00000384254 FKBP5Q13451 457 aaPredicted RBP9.23□□□□□ -0.93
RNU6-40P-201ENST00000384254 GLYCTKQ8IVS8 523 aa9.23□□□□□ -0.93
RNU6-40P-201ENST00000384254 CHMP7Q8WUX9 453 aaPredicted RBP9.23□□□□□ -0.93
RNU6-40P-201ENST00000384254 COL26A1Q96A83 441 aa9.23□□□□□ -0.93
RNU6-40P-201ENST00000384254 SLC4A9Q96Q91 983 aa9.23□□□□□ -0.93
RNU6-40P-201ENST00000384254 H3BRB1 525 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 PPP1R12BO60237 982 aaPredicted RBP9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 ZIC2O95409 532 aaPredicted RBP9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 GTF2E1P29083 439 aaPredicted RBP9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 ADD1P35611 737 aaKnown RBP9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 SMTNP53814 917 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 TLR1Q15399 786 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 NBPF15Q8N660 670 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 NLRP3Q96P20 1036 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 TSPAN10Q9H1Z9 355 aaPredicted RBP9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 TUT1Q9H6E5 874 aaKnown RBP9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 PKD2L1Q9P0L9 805 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 ATAD2Q6PL18 1390 aa9.22□□□□□ -0.93
RNU6-40P-201ENST00000384254 A6NJY4 79 aa9.21□□□□□ -0.94
RNU6-40P-201ENST00000384254 WDR4P57081 412 aaKnown RBP9.21□□□□□ -0.94
RNU6-40P-201ENST00000384254 ZNF211Q13398 564 aaPredicted RBP9.21□□□□□ -0.94
RNU6-40P-201ENST00000384254 GTF3C2Q8WUA4 911 aaPredicted RBP9.21□□□□□ -0.94
RNU6-40P-201ENST00000384254 SF3B2Q13435 895 aaKnown RBP9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 SLC9A9Q8IVB4 645 aa9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 CNKSR1Q969H4 720 aa9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 XAGE2Q96GT9 111 aa9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 ESYT1Q9BSJ8 1104 aa9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 SCHIP1Q9P0W5 487 aaPredicted RBP9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 SEPT3Q9UH03 358 aa9.2□□□□□ -0.94
RNU6-40P-201ENST00000384254 TNFRSF10AO00220 468 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 MEN1O00255 615 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 EPHA4P54764 986 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 PSMA6P60900 246 aaKnown RBP9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 CBLBQ13191 982 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 CLN3Q13286 438 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 FOXD4L4Q8WXT5 416 aaPredicted RBP9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 ITPKCQ96DU7 683 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 ANO2Q9NQ90 1003 aa9.19□□□□□ -0.94
RNU6-40P-201ENST00000384254 A0A1W2PRU2 124 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 C21orf2O43822 256 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 ICMTO60725 284 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 IL2RAP01589 272 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 ERCC3P19447 782 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 PTGIRP43119 386 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 MARSP56192 900 aaKnown RBP9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 NAA30Q147X3 362 aaPredicted RBP9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 Q6ZVU0 165 aa9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 PURBQ96QR8 312 aaKnown RBP9.18□□□□□ -0.94
RNU6-40P-201ENST00000384254 J3QL48 77 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 CDK2AP1O14519 115 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 FOXK2Q01167 660 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 RELBQ01201 579 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 MTFR1Q15390 333 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 TBCELQ5QJ74 424 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 STAG2Q8N3U4 1231 aa9.17□□□□□ -0.94
RNU6-40P-201ENST00000384254 GDF9O60383 454 aa9.16□□□□□ -0.94
RNU6-40P-201ENST00000384254 HELQQ8TDG4 1101 aa9.16□□□□□ -0.94
RNU6-40P-201ENST00000384254 ZFAND3Q9H8U3 227 aa9.16□□□□□ -0.94
RNU6-40P-201ENST00000384254 DNMT3AQ9Y6K1 912 aaPredicted RBP9.16□□□□□ -0.94
RNU6-40P-201ENST00000384254 UPP2O95045 317 aa9.15□□□□□ -0.94
RNU6-40P-201ENST00000384254 C16orf46Q6P387 395 aa9.15□□□□□ -0.94
RNU6-40P-201ENST00000384254 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
RNU6-40P-201ENST00000384254 ZNF232Q9UNY5 417 aa9.15□□□□□ -0.94
RNU6-40P-201ENST00000384254 AMOTL2Q9Y2J4 779 aa9.15□□□□□ -0.94
RNU6-40P-201ENST00000384254 SERTM1A2A2V5 107 aa9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 FAM13AO94988 1023 aa9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 TIMP2P16035 220 aa9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 RBM25P49756 843 aaKnown RBP9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 CENPCQ03188 943 aa9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 ZSCAN10Q96SZ4 725 aaPredicted RBP9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 C2orf49Q9BVC5 232 aaPredicted RBP9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 TOR4AQ9NXH8 423 aa9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 CABP1Q9NZU7 370 aa9.14□□□□□ -0.95
RNU6-40P-201ENST00000384254 MAPK1P28482 360 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 PRR20EP86478 221 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 PRR20CP86479 221 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 PRR20DP86480 221 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 PRR20BP86481 221 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 PRR20AP86496 221 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 SLC27A3Q5K4L6 730 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 CAPN12Q6ZSI9 719 aa9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 KLF16Q9BXK1 252 aaPredicted RBP9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 ZNF395Q9H8N7 513 aaPredicted RBP9.13□□□□□ -0.95
RNU6-40P-201ENST00000384254 SMPD1P17405 629 aa9.12□□□□□ -0.95
RNU6-40P-201ENST00000384254 MTMR3Q13615 1198 aa9.12□□□□□ -0.95
RNU6-40P-201ENST00000384254 GNASQ5JWF2 1037 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms