RNA–Protein interactions for RNA: ENST00000383018.7

SNRNP25-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SNRNP25, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-202ENST00000383018 C5P01031 1676 aa28.13■■■□□ 2.09
SNRNP25-202ENST00000383018 PRKRIP1Q9H875 184 aaPredicted RBP28.13■■■□□ 2.09
SNRNP25-202ENST00000383018 MRC1P22897 1456 aa28.13■■■□□ 2.09
SNRNP25-202ENST00000383018 LOC102724428A0A0B4J2F2 783 aa28.12■■■□□ 2.09
SNRNP25-202ENST00000383018 SIK1P57059 783 aa28.12■■■□□ 2.09
SNRNP25-202ENST00000383018 GAS2L2Q8NHY3 880 aa28.12■■■□□ 2.09
SNRNP25-202ENST00000383018 SLC4A9Q96Q91 983 aa28.11■■■□□ 2.09
SNRNP25-202ENST00000383018 SLC52A2Q9HAB3 445 aa28.11■■■□□ 2.09
SNRNP25-202ENST00000383018 ZNF831Q5JPB2 1677 aa28.1■■■□□ 2.09
SNRNP25-202ENST00000383018 IL17REQ8NFR9 667 aa28.09■■■□□ 2.09
SNRNP25-202ENST00000383018 ITPK1Q13572 414 aa28.08■■■□□ 2.09
SNRNP25-202ENST00000383018 PLEKHF1Q96S99 279 aa28.08■■■□□ 2.09
SNRNP25-202ENST00000383018 PNPLA7Q6ZV29 1317 aa28.08■■■□□ 2.09
SNRNP25-202ENST00000383018 MAP3K5Q99683 1374 aa28.08■■■□□ 2.09
SNRNP25-202ENST00000383018 GNAT3A8MTJ3 354 aa28.07■■■□□ 2.08
SNRNP25-202ENST00000383018 C4BP0C0L5 1744 aa28.06■■■□□ 2.08
SNRNP25-202ENST00000383018 LINC00116Q8NCU8 138 aa28.05■■■□□ 2.08
SNRNP25-202ENST00000383018 HMGB2P26583 209 aaKnown RBP28.04■■■□□ 2.08
SNRNP25-202ENST00000383018 SPON1Q9HCB6 807 aa28.04■■■□□ 2.08
SNRNP25-202ENST00000383018 TFCP2L1Q9NZI6 479 aa28.04■■■□□ 2.08
SNRNP25-202ENST00000383018 CEMIPQ8WUJ3 1361 aa28.03■■■□□ 2.08
SNRNP25-202ENST00000383018 ATP6V1AP38606 617 aa28.03■■■□□ 2.08
SNRNP25-202ENST00000383018 SIPA1L3O60292 1781 aaPredicted RBP28.03■■■□□ 2.08
SNRNP25-202ENST00000383018 ZBTB7AO95365 584 aa28.02■■■□□ 2.08
SNRNP25-202ENST00000383018 AMIGO3Q86WK7 504 aa28.02■■■□□ 2.08
SNRNP25-202ENST00000383018 PTGER2P43116 358 aa28.01■■■□□ 2.07
SNRNP25-202ENST00000383018 SGIP1Q9BQI5 828 aa28.01■■■□□ 2.07
SNRNP25-202ENST00000383018 UBR3Q6ZT12 1888 aa28.01■■■□□ 2.07
SNRNP25-202ENST00000383018 COL23A1Q86Y22 540 aaPredicted RBP28■■■□□ 2.07
SNRNP25-202ENST00000383018 RBM42Q9BTD8 480 aaKnown RBP28■■■□□ 2.07
SNRNP25-202ENST00000383018 MTFR1LQ9H019 292 aa28■■■□□ 2.07
SNRNP25-202ENST00000383018 COL5A3P25940 1745 aaPredicted RBP28■■■□□ 2.07
SNRNP25-202ENST00000383018 COL24A1Q17RW2 1714 aa28■■■□□ 2.07
SNRNP25-202ENST00000383018 CICQ96RK0 1608 aaPredicted RBP27.99■■■□□ 2.07
SNRNP25-202ENST00000383018 SLC39A6Q13433 755 aa27.98■■■□□ 2.07
SNRNP25-202ENST00000383018 SLC16A10Q8TF71 515 aa27.98■■■□□ 2.07
SNRNP25-202ENST00000383018 ATF5Q9Y2D1 282 aaPredicted RBP27.98■■■□□ 2.07
SNRNP25-202ENST00000383018 DLG5Q8TDM6 1919 aa27.98■■■□□ 2.07
SNRNP25-202ENST00000383018 MYH14Q7Z406 1995 aaKnown RBP27.97■■■□□ 2.07
SNRNP25-202ENST00000383018 HTATSF1O43719 755 aaKnown RBP27.97■■■□□ 2.07
SNRNP25-202ENST00000383018 PTCD1O75127 700 aaKnown RBP27.97■■■□□ 2.07
SNRNP25-202ENST00000383018 KCPQ6ZWJ8 1503 aa27.97■■■□□ 2.07
SNRNP25-202ENST00000383018 UBR2Q8IWV8 1755 aa27.96■■■□□ 2.07
SNRNP25-202ENST00000383018 TJP1Q07157 1748 aa27.95■■■□□ 2.07
SNRNP25-202ENST00000383018 RC3H1Q5TC82 1133 aaKnown RBP27.94■■■□□ 2.06
SNRNP25-202ENST00000383018 SMIM5Q71RC9 77 aa27.94■■■□□ 2.06
SNRNP25-202ENST00000383018 AK7Q96M32 723 aa27.94■■■□□ 2.06
SNRNP25-202ENST00000383018 PNNQ9H307 717 aaKnown RBP27.94■■■□□ 2.06
SNRNP25-202ENST00000383018 TEFQ10587 303 aa27.93■■■□□ 2.06
SNRNP25-202ENST00000383018 DCTN1Q14203 1278 aa27.92■■■□□ 2.06
SNRNP25-202ENST00000383018 NFE2L2Q16236 605 aa27.92■■■□□ 2.06
SNRNP25-202ENST00000383018 MCM10Q7L590 875 aa27.92■■■□□ 2.06
SNRNP25-202ENST00000383018 FLAD1Q8NFF5 587 aa27.92■■■□□ 2.06
SNRNP25-202ENST00000383018 CNTNAP4Q9C0A0 1308 aa27.92■■■□□ 2.06
SNRNP25-202ENST00000383018 SSFA2P28290 1259 aa27.9■■■□□ 2.06
SNRNP25-202ENST00000383018 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.89■■■□□ 2.06
SNRNP25-202ENST00000383018 ZNF790Q6PG37 636 aa27.89■■■□□ 2.06
SNRNP25-202ENST00000383018 RTF1Q92541 710 aaKnown RBP27.89■■■□□ 2.06
SNRNP25-202ENST00000383018 ADAMTS8Q9UP79 889 aa27.89■■■□□ 2.06
SNRNP25-202ENST00000383018 GNPATO15228 680 aa27.88■■■□□ 2.05
SNRNP25-202ENST00000383018 CCDC184Q52MB2 194 aa27.88■■■□□ 2.05
SNRNP25-202ENST00000383018 DNAJC10Q8IXB1 793 aa27.88■■■□□ 2.05
SNRNP25-202ENST00000383018 VSIG10Q8N0Z9 540 aa27.88■■■□□ 2.05
SNRNP25-202ENST00000383018 NEFMP07197 916 aa27.87■■■□□ 2.05
SNRNP25-202ENST00000383018 KCNQ3O43525 872 aa27.86■■■□□ 2.05
SNRNP25-202ENST00000383018 RPS6KA4O75676 772 aa27.86■■■□□ 2.05
SNRNP25-202ENST00000383018 INTS5Q6P9B9 1019 aaKnown RBP27.86■■■□□ 2.05
SNRNP25-202ENST00000383018 ZNF496Q96IT1 587 aaPredicted RBP27.86■■■□□ 2.05
SNRNP25-202ENST00000383018 PHF14O94880 888 aa27.85■■■□□ 2.05
SNRNP25-202ENST00000383018 CYP19A1P11511 503 aaPredicted RBP27.85■■■□□ 2.05
SNRNP25-202ENST00000383018 CRKLP46109 303 aaKnown RBP27.85■■■□□ 2.05
SNRNP25-202ENST00000383018 MAPK8IP3Q9UPT6 1336 aa27.85■■■□□ 2.05
SNRNP25-202ENST00000383018 BTBD11A6QL63 1104 aa27.84■■■□□ 2.05
SNRNP25-202ENST00000383018 MSH5O43196 834 aa27.84■■■□□ 2.05
SNRNP25-202ENST00000383018 TMPOP42166 694 aaKnown RBP27.83■■■□□ 2.05
SNRNP25-202ENST00000383018 WDR43Q15061 677 aaKnown RBP eCLIP27.83■■■□□ 2.05
SNRNP25-202ENST00000383018 RTCBQ9Y3I0 505 aaKnown RBP27.83■■■□□ 2.05
SNRNP25-202ENST00000383018 TTC5Q8N0Z6 440 aa27.82■■■□□ 2.04
SNRNP25-202ENST00000383018 RUNDC1Q96C34 613 aa27.82■■■□□ 2.04
SNRNP25-202ENST00000383018 PPP1R1BQ9UD71 204 aaPredicted RBP27.82■■■□□ 2.04
SNRNP25-202ENST00000383018 HEG1Q9ULI3 1381 aa27.82■■■□□ 2.04
SNRNP25-202ENST00000383018 TAF7Q15545 349 aaPredicted RBP27.81■■■□□ 2.04
SNRNP25-202ENST00000383018 CCDC146Q8IYE0 955 aa27.81■■■□□ 2.04
SNRNP25-202ENST00000383018 ARHGEF1Q92888 912 aaKnown RBP27.81■■■□□ 2.04
SNRNP25-202ENST00000383018 ARXQ96QS3 562 aa27.81■■■□□ 2.04
SNRNP25-202ENST00000383018 ADRA2BP18089 450 aa27.8■■■□□ 2.04
SNRNP25-202ENST00000383018 TRAPPC3LQ5T215 181 aa27.8■■■□□ 2.04
SNRNP25-202ENST00000383018 THUMPD2Q9BTF0 503 aaKnown RBP27.8■■■□□ 2.04
SNRNP25-202ENST00000383018 ANP32CO43423 234 aa27.79■■■□□ 2.04
SNRNP25-202ENST00000383018 RIPK4P57078 832 aa27.79■■■□□ 2.04
SNRNP25-202ENST00000383018 MSL1Q68DK7 614 aa27.78■■■□□ 2.04
SNRNP25-202ENST00000383018 FMNL2Q96PY5 1086 aa27.78■■■□□ 2.04
SNRNP25-202ENST00000383018 CCDC87Q9NVE4 849 aa27.78■■■□□ 2.04
SNRNP25-202ENST00000383018 C4AP0C0L4 1744 aa27.77■■■□□ 2.04
SNRNP25-202ENST00000383018 POLD1P28340 1107 aa27.76■■■□□ 2.03
SNRNP25-202ENST00000383018 KDM3BQ7LBC6 1761 aa27.76■■■□□ 2.03
SNRNP25-202ENST00000383018 SOS1Q07889 1333 aaPredicted RBP27.75■■■□□ 2.03
SNRNP25-202ENST00000383018 FHDC1Q9C0D6 1143 aaPredicted RBP27.75■■■□□ 2.03
SNRNP25-202ENST00000383018 MIS18AQ9NYP9 233 aa27.75■■■□□ 2.03
SNRNP25-202ENST00000383018 SYT17Q9BSW7 474 aa27.74■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms