RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 EFCAB5A4FU69 1503 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 NFKBIBQ15653 356 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 MAP3K11Q16584 847 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 PIBF1Q8WXW3 757 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 ANO10Q9NW15 660 aa11.47□□□□□ -0.57
VLDLR-203ENST00000382100 ZWINTO95229 277 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 PIP4K2BP78356 416 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.57
VLDLR-203ENST00000382100 CAPZA3Q96KX2 299 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 ARHGAP25P42331 645 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 SPC24Q8NBT2 197 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 COG3Q96JB2 828 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 THEGQ9P2T0 379 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
VLDLR-203ENST00000382100 CCT4P50991 539 aaKnown RBP11.46□□□□□ -0.57
VLDLR-203ENST00000382100 MNAT1P51948 309 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.57
VLDLR-203ENST00000382100 TNIP1Q15025 636 aa11.46□□□□□ -0.57
VLDLR-203ENST00000382100 HAUS2Q9NVX0 235 aa11.46□□□□□ -0.58
VLDLR-203ENST00000382100 URB1O60287 2271 aaKnown RBP11.46□□□□□ -0.58
VLDLR-203ENST00000382100 ERICH3Q5RHP9 1530 aa11.46□□□□□ -0.58
VLDLR-203ENST00000382100 UPF3BQ9BZI7 483 aaKnown RBP11.46□□□□□ -0.58
VLDLR-203ENST00000382100 CYP46A1Q9Y6A2 500 aa11.46□□□□□ -0.58
VLDLR-203ENST00000382100 PABPN1LA6NDY0 278 aaKnown RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 CCDC155Q8N6L0 562 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 KIF5BP33176 963 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 KLHL10Q6JEL2 608 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 CCDC12Q8WUD4 166 aaPredicted RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 IRX3P78415 501 aaPredicted RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 IFFO1Q0D2I5 559 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 TSNAXIP1Q2TAA8 658 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 PHLDB2Q86SQ0 1253 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 CUX2O14529 1486 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 TOP2AP11388 1531 aaKnown RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 RBM27Q9P2N5 1060 aaKnown RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 U3KPZ7 1027 aaPredicted RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 TAOK1Q7L7X3 1001 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 NAP1L3Q99457 506 aaPredicted RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 DDX19AQ9NUU7 478 aaKnown RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 SUPT6HQ7KZ85 1726 aaKnown RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 C16orf45Q96MC5 204 aaPredicted RBP11.45□□□□□ -0.58
VLDLR-203ENST00000382100 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 EBAG9O00559 213 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 BCL2L13Q9BXK5 485 aa11.45□□□□□ -0.58
VLDLR-203ENST00000382100 AMPHP49418 695 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 TAF7Q15545 349 aaPredicted RBP11.44□□□□□ -0.58
VLDLR-203ENST00000382100 CACNA2D3Q8IZS8 1091 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 GRPEL1Q9HAV7 217 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 SLMAPQ14BN4 828 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 HIRIP3Q9BW71 556 aaPredicted RBP11.44□□□□□ -0.58
VLDLR-203ENST00000382100 RASSF2P50749 326 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 PDILTQ8N807 584 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 PRKRIP1Q9H875 184 aaPredicted RBP11.44□□□□□ -0.58
VLDLR-203ENST00000382100 AKAP2Q9Y2D5 859 aa11.44□□□□□ -0.58
VLDLR-203ENST00000382100 ATP2A2P16615 1042 aaKnown RBP11.43□□□□□ -0.58
VLDLR-203ENST00000382100 CCDC30Q5VVM6 783 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 PPP1R2P41236 205 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 GIGYF1O75420 1035 aaPredicted RBP11.43□□□□□ -0.58
VLDLR-203ENST00000382100 LUC7L3O95232 432 aaKnown RBP11.43□□□□□ -0.58
VLDLR-203ENST00000382100 YEATS4O95619 227 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 TRPC3Q13507 836 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 CCDC183Q5T5S1 534 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 UQCRHLA0A096LP55 91 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 UQCRHP07919 91 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 NUP62CLQ9H1M0 184 aa11.43□□□□□ -0.58
VLDLR-203ENST00000382100 KRT18P05783 430 aaKnown RBP11.43□□□□□ -0.58
VLDLR-203ENST00000382100 GBP6Q6ZN66 633 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 FBF1Q8TES7 1133 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 PKD2Q13563 968 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 PPP4R3AQ6IN85 833 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 SOGA1O94964 1423 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 UBE2Q2Q8WVN8 375 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 TSG101Q99816 390 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 IQCGQ9H095 443 aaKnown RBP11.42□□□□□ -0.58
VLDLR-203ENST00000382100 RAPGEF2Q9Y4G8 1499 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 WDHD1O75717 1129 aaPredicted RBP11.42□□□□□ -0.58
VLDLR-203ENST00000382100 AMPD3Q01432 767 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 RILPL2Q969X0 211 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 LRRFIP2Q9Y608 721 aaKnown RBP11.42□□□□□ -0.58
VLDLR-203ENST00000382100 GSTTP1A0A1W2PQM5 241 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 MPHOSPH10O00566 681 aaKnown RBP11.42□□□□□ -0.58
VLDLR-203ENST00000382100 RAB3IL1Q8TBN0 382 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 DZIP1Q86YF9 867 aaKnown RBP11.42□□□□□ -0.58
VLDLR-203ENST00000382100 SPRYD3Q8NCJ5 442 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 EHMT1Q9H9B1 1298 aa11.42□□□□□ -0.58
VLDLR-203ENST00000382100 GMNNO75496 209 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 ATL3Q6DD88 541 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 TAX1BP1Q86VP1 789 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 LMBR1Q8WVP7 490 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 MACROD2A1Z1Q3 448 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 RPGRIP1Q96KN7 1286 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 PPFIA1Q13136 1202 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 HSP90AA5PQ58FG0 334 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 ARMC9Q7Z3E5 817 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 SSX2IPQ9Y2D8 614 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 MSL1Q68DK7 614 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 LMNTD2Q8IXW0 634 aa11.41□□□□□ -0.58
VLDLR-203ENST00000382100 AFAP1L2Q8N4X5 818 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms