RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 KIF1BPQ96EK5 621 aa17.9■□□□□ 0.46
VLDLR-202ENST00000382099 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
VLDLR-202ENST00000382099 ERCC6L2Q5T890 1561 aa17.89■□□□□ 0.45
VLDLR-202ENST00000382099 GSPT1P15170 499 aaKnown RBP17.89■□□□□ 0.45
VLDLR-202ENST00000382099 GUCY2CP25092 1073 aa17.89■□□□□ 0.45
VLDLR-202ENST00000382099 BRPF1P55201 1214 aaPredicted RBP17.89■□□□□ 0.45
VLDLR-202ENST00000382099 ERCC6LQ2NKX8 1250 aa17.89■□□□□ 0.45
VLDLR-202ENST00000382099 TRAPPC8Q9Y2L5 1435 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 IPO8O15397 1037 aaKnown RBP17.88■□□□□ 0.45
VLDLR-202ENST00000382099 TTC31Q49AM3 519 aaPredicted RBP17.88■□□□□ 0.45
VLDLR-202ENST00000382099 GORABQ5T7V8 394 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 SMARCE1Q969G3 411 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 ERO1AQ96HE7 468 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 CEP83Q9Y592 693 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 CLTCL1P53675 1640 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 CFAP70Q5T0N1 1121 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 GCC1Q96CN9 775 aa17.88■□□□□ 0.45
VLDLR-202ENST00000382099 ZCCHC17Q9NP64 241 aaKnown RBP17.88■□□□□ 0.45
VLDLR-202ENST00000382099 CEP152O94986 1710 aa17.87■□□□□ 0.45
VLDLR-202ENST00000382099 NOM1Q5C9Z4 860 aaKnown RBP17.87■□□□□ 0.45
VLDLR-202ENST00000382099 ABCC2Q92887 1545 aa17.87■□□□□ 0.45
VLDLR-202ENST00000382099 SLU7O95391 586 aaKnown RBP17.87■□□□□ 0.45
VLDLR-202ENST00000382099 LUZP1Q86V48 1076 aa17.87■□□□□ 0.45
VLDLR-202ENST00000382099 NFATC2IPQ8NCF5 419 aa17.87■□□□□ 0.45
VLDLR-202ENST00000382099 RRP15Q9Y3B9 282 aaKnown RBP17.87■□□□□ 0.45
VLDLR-202ENST00000382099 GGT6Q6P531 493 aa17.87■□□□□ 0.45
VLDLR-202ENST00000382099 TRPM2O94759 1503 aa17.86■□□□□ 0.45
VLDLR-202ENST00000382099 CCDC172P0C7W6 258 aa17.86■□□□□ 0.45
VLDLR-202ENST00000382099 U2AF1L5P0DN76 240 aaPredicted RBP17.86■□□□□ 0.45
VLDLR-202ENST00000382099 LMAN1P49257 510 aa17.86■□□□□ 0.45
VLDLR-202ENST00000382099 U2AF1Q01081 240 aaKnown RBP eCLIP17.86■□□□□ 0.45
VLDLR-202ENST00000382099 ZSCAN25Q6NSZ9 544 aa17.86■□□□□ 0.45
VLDLR-202ENST00000382099 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.86■□□□□ 0.45
VLDLR-202ENST00000382099 SPAG9O60271 1321 aaKnown RBP17.86■□□□□ 0.45
VLDLR-202ENST00000382099 A0A1B0GUL7 405 aa17.86■□□□□ 0.45
VLDLR-202ENST00000382099 TMEM132EQ6IEE7 984 aa17.85■□□□□ 0.45
VLDLR-202ENST00000382099 PNMA6AP0CW24 399 aaPredicted RBP17.85■□□□□ 0.45
VLDLR-202ENST00000382099 CCDC192P0DO97 292 aa17.85■□□□□ 0.45
VLDLR-202ENST00000382099 MORC1Q86VD1 984 aa17.85■□□□□ 0.45
VLDLR-202ENST00000382099 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
VLDLR-202ENST00000382099 EXOC6BQ9Y2D4 811 aa17.85■□□□□ 0.45
VLDLR-202ENST00000382099 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
VLDLR-202ENST00000382099 BRMS1Q9HCU9 246 aa17.85■□□□□ 0.45
VLDLR-202ENST00000382099 CAMK4Q16566 473 aa17.84■□□□□ 0.45
VLDLR-202ENST00000382099 TMCO3Q6UWJ1 677 aa17.84■□□□□ 0.45
VLDLR-202ENST00000382099 CHD1O14646 1710 aa17.84■□□□□ 0.45
VLDLR-202ENST00000382099 USP27XA6NNY8 438 aa17.84■□□□□ 0.45
VLDLR-202ENST00000382099 CLCN6P51797 869 aa17.84■□□□□ 0.45
VLDLR-202ENST00000382099 PLA2G4AP47712 749 aa17.83■□□□□ 0.45
VLDLR-202ENST00000382099 FAM212AQ96EL1 285 aa17.83■□□□□ 0.45
VLDLR-202ENST00000382099 CARD14Q9BXL6 1004 aa17.83■□□□□ 0.45
VLDLR-202ENST00000382099 ABCC1P33527 1531 aa17.83■□□□□ 0.45
VLDLR-202ENST00000382099 PLCH2O75038 1416 aa17.83■□□□□ 0.45
VLDLR-202ENST00000382099 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.44
VLDLR-202ENST00000382099 ARHGAP29Q52LW3 1261 aa17.83■□□□□ 0.44
VLDLR-202ENST00000382099 MUM1L1Q5H9M0 696 aa17.83■□□□□ 0.44
VLDLR-202ENST00000382099 TRAK1Q9UPV9 953 aa17.83■□□□□ 0.44
VLDLR-202ENST00000382099 WDR33Q9C0J8 1336 aaKnown RBP17.83■□□□□ 0.44
VLDLR-202ENST00000382099 SRLQ86TD4 932 aa17.83■□□□□ 0.44
VLDLR-202ENST00000382099 CACTINQ8WUQ7 758 aaKnown RBP17.83■□□□□ 0.44
VLDLR-202ENST00000382099 CLIP2Q9UDT6 1046 aa17.83■□□□□ 0.44
VLDLR-202ENST00000382099 FHOD1Q9Y613 1164 aa17.83■□□□□ 0.44
VLDLR-202ENST00000382099 FAM53CQ9NYF3 392 aa17.82■□□□□ 0.44
VLDLR-202ENST00000382099 PTPRTO14522 1441 aa17.82■□□□□ 0.44
VLDLR-202ENST00000382099 ANKRD65E5RJM6 399 aa17.82■□□□□ 0.44
VLDLR-202ENST00000382099 CCDC34Q96HJ3 373 aa17.82■□□□□ 0.44
VLDLR-202ENST00000382099 CFAP44Q96MT7 982 aa17.82■□□□□ 0.44
VLDLR-202ENST00000382099 UPF3BQ9BZI7 483 aaKnown RBP17.82■□□□□ 0.44
VLDLR-202ENST00000382099 UBE2HP62256 183 aa17.81■□□□□ 0.44
VLDLR-202ENST00000382099 SRCIN1Q9C0H9 1055 aa17.81■□□□□ 0.44
VLDLR-202ENST00000382099 SHROOM2Q13796 1616 aa17.81■□□□□ 0.44
VLDLR-202ENST00000382099 DTNBO60941 627 aa17.81■□□□□ 0.44
VLDLR-202ENST00000382099 DNAJC21Q5F1R6 531 aaKnown RBP17.81■□□□□ 0.44
VLDLR-202ENST00000382099 AK7Q96M32 723 aa17.81■□□□□ 0.44
VLDLR-202ENST00000382099 ARGLU1Q9NWB6 273 aaPredicted RBP17.81■□□□□ 0.44
VLDLR-202ENST00000382099 TDO2P48775 406 aa17.81■□□□□ 0.44
VLDLR-202ENST00000382099 ERVK-7P63135 1459 aa17.8■□□□□ 0.44
VLDLR-202ENST00000382099 CKAP2LQ8IYA6 745 aa17.8■□□□□ 0.44
VLDLR-202ENST00000382099 OAS2P29728 719 aaKnown RBP17.8■□□□□ 0.44
VLDLR-202ENST00000382099 PLEKHM2Q8IWE5 1019 aa17.8■□□□□ 0.44
VLDLR-202ENST00000382099 FILIP1Q7Z7B0 1213 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 PACS2Q86VP3 889 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 FAM200AQ8TCP9 573 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 SEC31AO94979 1220 aaKnown RBP17.79■□□□□ 0.44
VLDLR-202ENST00000382099 TTC22Q5TAA0 569 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 ARID5BQ14865 1188 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 TTLL5Q6EMB2 1281 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 OTUD7AQ8TE49 926 aaPredicted RBP17.79■□□□□ 0.44
VLDLR-202ENST00000382099 CXorf56Q9H5V9 222 aa17.79■□□□□ 0.44
VLDLR-202ENST00000382099 SKIDA1Q1XH10 827 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 EFCAB2Q5VUJ9 269 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 TMED8Q6PL24 325 aaPredicted RBP17.78■□□□□ 0.44
VLDLR-202ENST00000382099 LEKR1Q6ZMV7 388 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 CARD10Q9BWT7 1032 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 PTPRCP08575 1304 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 SDSP20132 328 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 TRHP20396 242 aaPredicted RBP17.78■□□□□ 0.44
VLDLR-202ENST00000382099 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
VLDLR-202ENST00000382099 STK26Q9P289 416 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms