RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 SLFN5Q08AF3 891 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 HSP90B2PQ58FF3 399 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 MCM10Q7L590 875 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■■■ 96.1
SNPH-202ENST00000381873 MIS18AQ9NYP9 233 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 ZNF652Q9Y2D9 606 aa17.62■□□□□ 0.41
SNPH-202ENST00000381873 BRPF1P55201 1214 aaPredicted RBP17.61■□□□□ 0.41
SNPH-202ENST00000381873 CWC27Q6UX04 472 aaKnown RBP17.61■□□□□ 0.41
SNPH-202ENST00000381873 TMOD3Q9NYL9 352 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 TTC21AQ8NDW8 1320 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 TAF7Q15545 349 aaPredicted RBP17.61■□□□□ 0.41
SNPH-202ENST00000381873 TSPY26PQ9H489 355 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 ABCF2Q9UG63 623 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 NOL7Q9UMY1 257 aaKnown RBP17.61■□□□□ 0.41
SNPH-202ENST00000381873 EXOC6BQ9Y2D4 811 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 K7ELQ4 463 aaPredicted RBP17.61■□□□□ 0.41
SNPH-202ENST00000381873 RDXP35241 583 aaKnown RBP17.61■□□□□ 0.41
SNPH-202ENST00000381873 TMEM57Q8N5G2 664 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 AK7Q96M32 723 aa17.61■□□□□ 0.41
SNPH-202ENST00000381873 CEBPAP49715 358 aaPredicted RBP17.6■□□□□ 0.41
SNPH-202ENST00000381873 HSP90AB2PQ58FF8 381 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 KIF1BPQ96EK5 621 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 ZSCAN31Q96LW9 406 aaPredicted RBP17.6■□□□□ 0.41
SNPH-202ENST00000381873 METTL24Q5JXM2 366 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 TTLL5Q6EMB2 1281 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 CADPS2Q86UW7 1296 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 STIM1Q13586 685 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 CAGE1Q8TC20 777 aa17.6■□□□□ 0.41
SNPH-202ENST00000381873 JAKMIP1Q96N16 626 aaKnown RBP17.6■□□□□ 0.41
SNPH-202ENST00000381873 BACH2Q9BYV9 841 aa17.59■□□□□ 0.41
SNPH-202ENST00000381873 SYCP1Q15431 976 aa17.59■□□□□ 0.41
SNPH-202ENST00000381873 NME9Q86XW9 330 aa17.59■□□□□ 0.41
SNPH-202ENST00000381873 ZHX3Q9H4I2 956 aa17.59■□□□□ 0.41
SNPH-202ENST00000381873 AIDAQ96BJ3 306 aa17.58■□□□□ 0.41
SNPH-202ENST00000381873 PDRG1Q9NUG6 133 aa17.58■□□□□ 0.41
SNPH-202ENST00000381873 ZNHIT6Q9NWK9 470 aaKnown RBP17.58■□□□□ 0.41
SNPH-202ENST00000381873 TMOD2Q9NZR1 351 aa17.58■□□□□ 0.41
SNPH-202ENST00000381873 GLRX3O76003 335 aaKnown RBP17.58■□□□□ 0.4
SNPH-202ENST00000381873 AKAP2Q9Y2D5 859 aa17.58■□□□□ 0.4
SNPH-202ENST00000381873 CCDC192P0DO97 292 aa17.58■□□□□ 0.4
SNPH-202ENST00000381873 DCTN1Q14203 1278 aa17.58■□□□□ 0.4
SNPH-202ENST00000381873 PZPP20742 1482 aa17.57■□□□□ 0.4
SNPH-202ENST00000381873 ZNF771Q7L3S4 317 aaPredicted RBP17.57■□□□□ 0.4
SNPH-202ENST00000381873 ADGBQ8N7X0 1667 aa17.57■□□□□ 0.4
SNPH-202ENST00000381873 IFIT1P09914 478 aaKnown RBP17.57■□□□□ 0.4
SNPH-202ENST00000381873 UHRF1BP1Q6BDS2 1440 aa17.57■□□□□ 0.4
SNPH-202ENST00000381873 BMP2KQ9NSY1 1161 aaPredicted RBP17.57■□□□□ 0.4
SNPH-202ENST00000381873 DACH1Q9UI36 760 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 SERPINC1P01008 464 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 PDIA4P13667 645 aaKnown RBP17.56■□□□□ 0.4
SNPH-202ENST00000381873 PDCL3Q9H2J4 239 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 TNMDQ9H2S6 317 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 ZPR1O75312 459 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
SNPH-202ENST00000381873 MYO5CQ9NQX4 1742 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 CFAP45Q9UL16 551 aa17.56■□□□□ 0.4
SNPH-202ENST00000381873 ZMYM3Q14202 1370 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 PAF1Q8N7H5 531 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 SSH1Q8WYL5 1049 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 CCP110O43303 1012 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 NUTM1Q86Y26 1132 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 DISP3Q9P2K9 1392 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 RAB11FIP3O75154 756 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 EMILIN1Q9Y6C2 1016 aa17.55■□□□□ 0.4
SNPH-202ENST00000381873 PATL2C9JE40 543 aaKnown RBP17.54■□□□□ 0.4
SNPH-202ENST00000381873 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 LUC7LQ9NQ29 371 aaKnown RBP17.54■□□□□ 0.4
SNPH-202ENST00000381873 MYO6Q9UM54 1294 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 ADAMTS2O95450 1211 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 DHX8Q14562 1220 aaKnown RBP17.54■□□□□ 0.4
SNPH-202ENST00000381873 CAVIN4Q5BKX8 364 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 MPRIPQ6WCQ1 1025 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 USHBP1Q8N6Y0 703 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 ZNF287Q9HBT7 754 aa17.54■□□□□ 0.4
SNPH-202ENST00000381873 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
SNPH-202ENST00000381873 U3KPZ7 1027 aaPredicted RBP17.54■□□□□ 0.4
SNPH-202ENST00000381873 SSBP05455 408 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNPH-202ENST00000381873 WASF1Q92558 559 aa17.53■□□□□ 0.4
SNPH-202ENST00000381873 FBXO3Q9UK99 471 aa17.53■□□□□ 0.4
SNPH-202ENST00000381873 HSP90AB3PQ58FF7 597 aa17.53■□□□□ 0.4
SNPH-202ENST00000381873 ASXL1Q8IXJ9 1541 aa17.53■□□□□ 0.4
SNPH-202ENST00000381873 ERCC4Q92889 916 aaPredicted RBP17.53■□□□□ 0.4
SNPH-202ENST00000381873 MYD88Q99836 296 aa17.53■□□□□ 0.4
SNPH-202ENST00000381873 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNPH-202ENST00000381873 MX1P20591 662 aa17.52■□□□□ 0.4
SNPH-202ENST00000381873 PPFIBP1Q86W92 1011 aa17.52■□□□□ 0.4
SNPH-202ENST00000381873 SPATA32Q96LK8 384 aa17.52■□□□□ 0.4
SNPH-202ENST00000381873 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.4
SNPH-202ENST00000381873 IFIT5Q13325 482 aaKnown RBP17.52■□□□□ 0.4
SNPH-202ENST00000381873 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
SNPH-202ENST00000381873 MSH6P52701 1360 aa17.52■□□□□ 0.4
SNPH-202ENST00000381873 GCC2Q8IWJ2 1684 aa17.51■□□□□ 0.39
SNPH-202ENST00000381873 ZFYVE16Q7Z3T8 1539 aa17.51■□□□□ 0.39
SNPH-202ENST00000381873 RARSP54136 660 aaKnown RBP17.51■□□□□ 0.39
SNPH-202ENST00000381873 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
SNPH-202ENST00000381873 DNAAF4Q8WXU2 420 aa17.51■□□□□ 0.39
SNPH-202ENST00000381873 TBX22Q9Y458 520 aa17.51■□□□□ 0.39
SNPH-202ENST00000381873 EXOC5O00471 708 aa17.5■□□□□ 0.39
SNPH-202ENST00000381873 TANGO6Q9C0B7 1094 aa17.5■□□□□ 0.39
SNPH-202ENST00000381873 BOLA2Q9H3K6 86 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms