RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 PXDNLA1KZ92 1463 aa14.69□□□□□ -0.06
TRIM23-203ENST00000381018 GNAI3P08754 354 aa14.69□□□□□ -0.06
TRIM23-203ENST00000381018 XRCC6P12956 609 aaKnown RBP eCLIP14.69□□□□□ -0.06
TRIM23-203ENST00000381018 FKBP5Q13451 457 aaPredicted RBP14.69□□□□□ -0.06
TRIM23-203ENST00000381018 SKOR2Q2VWA4 1001 aaPredicted RBP14.69□□□□□ -0.06
TRIM23-203ENST00000381018 ABTB2Q8N961 1025 aa14.68□□□□□ -0.06
TRIM23-203ENST00000381018 ISY1Q9ULR0 285 aaKnown RBP14.68□□□□□ -0.06
TRIM23-203ENST00000381018 SETD1BQ9UPS6 1966 aaKnown RBP14.68□□□□□ -0.06
TRIM23-203ENST00000381018 PDE1AP54750 535 aa14.67□□□□□ -0.06
TRIM23-203ENST00000381018 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
TRIM23-203ENST00000381018 ARXQ96QS3 562 aa14.67□□□□□ -0.06
TRIM23-203ENST00000381018 ERC2O15083 957 aa14.67□□□□□ -0.06
TRIM23-203ENST00000381018 MRE11P49959 708 aa14.67□□□□□ -0.06
TRIM23-203ENST00000381018 TAF7Q15545 349 aaPredicted RBP14.67□□□□□ -0.06
TRIM23-203ENST00000381018 CLEC17AQ6ZS10 378 aa14.66□□□□□ -0.06
TRIM23-203ENST00000381018 IL17REQ8NFR9 667 aa14.66□□□□□ -0.06
TRIM23-203ENST00000381018 GOLGA6L22H0YM25 854 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 ST18O60284 1047 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 SSFA2P28290 1259 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 LTV1Q96GA3 475 aaPredicted RBP14.65□□□□□ -0.06
TRIM23-203ENST00000381018 LRRCC1Q9C099 1032 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 KDM3BQ7LBC6 1761 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 ATP8B2P98198 1209 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 EXOC6BQ9Y2D4 811 aa14.65□□□□□ -0.06
TRIM23-203ENST00000381018 NECTIN2Q92692 538 aa14.64□□□□□ -0.07
TRIM23-203ENST00000381018 RGPD2P0DJD1 1756 aa14.64□□□□□ -0.07
TRIM23-203ENST00000381018 SALL3Q9BXA9 1300 aa14.64□□□□□ -0.07
TRIM23-203ENST00000381018 PHRF1Q9P1Y6 1649 aaKnown RBP14.64□□□□□ -0.07
TRIM23-203ENST00000381018 IBTKQ9P2D0 1353 aaPredicted RBP14.64□□□□□ -0.07
TRIM23-203ENST00000381018 NFAT5O94916 1531 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 C14orf37Q86TY3 774 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 MED1Q15648 1581 aaPredicted RBP14.63□□□□□ -0.07
TRIM23-203ENST00000381018 LMO7Q8WWI1 1683 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 PNMA6EA0A0J9YXQ4 647 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 NUCB2P80303 420 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 GRPEL1Q9HAV7 217 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 PHF8Q9UPP1 1060 aa14.63□□□□□ -0.07
TRIM23-203ENST00000381018 MX1P20591 662 aa14.62□□□□□ -0.07
TRIM23-203ENST00000381018 PANK2Q9BZ23 570 aa14.62□□□□□ -0.07
TRIM23-203ENST00000381018 CWC22Q9HCG8 908 aaKnown RBP14.62□□□□□ -0.07
TRIM23-203ENST00000381018 CEMIPQ8WUJ3 1361 aa14.62□□□□□ -0.07
TRIM23-203ENST00000381018 BAG4O95429 457 aaKnown RBP14.61□□□□□ -0.07
TRIM23-203ENST00000381018 UBTFL1P0CB47 393 aaPredicted RBP14.61□□□□□ -0.07
TRIM23-203ENST00000381018 HDGFL1Q5TGJ6 251 aa14.61□□□□□ -0.07
TRIM23-203ENST00000381018 PIAS4Q8N2W9 510 aaPredicted RBP14.61□□□□□ -0.07
TRIM23-203ENST00000381018 USHBP1Q8N6Y0 703 aa14.61□□□□□ -0.07
TRIM23-203ENST00000381018 IP6K1Q92551 441 aa14.61□□□□□ -0.07
TRIM23-203ENST00000381018 SRCIN1Q9C0H9 1055 aa14.61□□□□□ -0.07
TRIM23-203ENST00000381018 LRRFIP2Q9Y608 721 aaKnown RBP14.61□□□□□ -0.07
TRIM23-203ENST00000381018 ZNF142P52746 1687 aaPredicted RBP14.61□□□□□ -0.07
TRIM23-203ENST00000381018 ESYT1Q9BSJ8 1104 aa14.6□□□□□ -0.07
TRIM23-203ENST00000381018 USP44Q9H0E7 712 aa14.6□□□□□ -0.07
TRIM23-203ENST00000381018 CYP2E1P05181 493 aaPredicted RBP14.59□□□□□ -0.07
TRIM23-203ENST00000381018 TSHZ3Q63HK5 1081 aa14.59□□□□□ -0.07
TRIM23-203ENST00000381018 STAP2Q9UGK3 403 aa14.59□□□□□ -0.07
TRIM23-203ENST00000381018 AOX1Q06278 1338 aa14.59□□□□□ -0.07
TRIM23-203ENST00000381018 CHMP4AQ9BY43 222 aa14.59□□□□□ -0.07
TRIM23-203ENST00000381018 HOXB7P09629 217 aa14.58□□□□□ -0.08
TRIM23-203ENST00000381018 MCCP23508 829 aa14.58□□□□□ -0.08
TRIM23-203ENST00000381018 KLHL40Q2TBA0 621 aa14.58□□□□□ -0.08
TRIM23-203ENST00000381018 PHAXQ9H814 394 aaKnown RBP14.58□□□□□ -0.08
TRIM23-203ENST00000381018 KCNH5Q8NCM2 988 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 SSH3Q8TE77 659 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 ADGRL3Q9HAR2 1447 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 TRIM6-TRIM34B2RNG4 842 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 CHMLP26374 656 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 NBPF6Q5VWK0 638 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 ANKLE2Q86XL3 938 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 RILPL2Q969X0 211 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 NBPF4Q96M43 638 aa14.57□□□□□ -0.08
TRIM23-203ENST00000381018 DDX49Q9Y6V7 483 aaKnown RBP14.57□□□□□ -0.08
TRIM23-203ENST00000381018 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
TRIM23-203ENST00000381018 MCM2P49736 904 aa14.56□□□□□ -0.08
TRIM23-203ENST00000381018 ANAPC15P60006 121 aa14.56□□□□□ -0.08
TRIM23-203ENST00000381018 EIF4A1P60842 406 aaKnown RBP14.56□□□□□ -0.08
TRIM23-203ENST00000381018 PSME1Q06323 249 aa14.56□□□□□ -0.08
TRIM23-203ENST00000381018 MCTP1Q6DN14 999 aa14.56□□□□□ -0.08
TRIM23-203ENST00000381018 RRAGDQ9NQL2 400 aaPredicted RBP14.56□□□□□ -0.08
TRIM23-203ENST00000381018 NEK4P51957 841 aa14.55□□□□□ -0.08
TRIM23-203ENST00000381018 POLA2Q14181 598 aa14.55□□□□□ -0.08
TRIM23-203ENST00000381018 GAS2L3Q86XJ1 694 aa14.55□□□□□ -0.08
TRIM23-203ENST00000381018 ZGPATQ8N5A5 531 aaKnown RBP14.55□□□□□ -0.08
TRIM23-203ENST00000381018 EIF2S2P20042 333 aaKnown RBP14.55□□□□□ -0.08
TRIM23-203ENST00000381018 ANO2Q9NQ90 1003 aa14.55□□□□□ -0.08
TRIM23-203ENST00000381018 NCAPD2Q15021 1401 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 TEFQ10587 303 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 PKP1Q13835 747 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 ESCO1Q5FWF5 840 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 AKAP4Q5JQC9 854 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 PPP1R42Q7Z4L9 355 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 LGR6Q9HBX8 967 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 CHPF2Q9P2E5 772 aa14.54□□□□□ -0.08
TRIM23-203ENST00000381018 EPB41L2O43491 1005 aaKnown RBP14.53□□□□□ -0.08
TRIM23-203ENST00000381018 SURF6O75683 361 aaKnown RBP14.53□□□□□ -0.08
TRIM23-203ENST00000381018 PLEKHO1Q53GL0 409 aaPredicted RBP14.53□□□□□ -0.08
TRIM23-203ENST00000381018 DNAAF4Q8WXU2 420 aa14.53□□□□□ -0.08
TRIM23-203ENST00000381018 IL1RAPL2Q9NP60 686 aa14.53□□□□□ -0.08
TRIM23-203ENST00000381018 SIPA1L3O60292 1781 aaPredicted RBP14.53□□□□□ -0.08
TRIM23-203ENST00000381018 SLIT3O75094 1523 aa14.53□□□□□ -0.08
TRIM23-203ENST00000381018 ZBTB7CA1YPR0 619 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms