RNA–Protein interactions for RNA: ENST00000380989.6

PITRM1-202, Transcript of pitrilysin metallopeptidase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PITRM1, Length 3,487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITRM1-202ENST00000380989 SSH1Q8WYL5 1049 aa14.49□□□□□ -0.09
PITRM1-202ENST00000380989 IFT57Q9NWB7 429 aa14.49□□□□□ -0.09
PITRM1-202ENST00000380989 AHDC1Q5TGY3 1603 aaPredicted RBP14.49□□□□□ -0.09
PITRM1-202ENST00000380989 COL16A1Q07092 1604 aaPredicted RBP14.49□□□□□ -0.09
PITRM1-202ENST00000380989 GNAI1P63096 354 aa14.49□□□□□ -0.09
PITRM1-202ENST00000380989 COL5A2P05997 1499 aaPredicted RBP14.48□□□□□ -0.09
PITRM1-202ENST00000380989 CRB1P82279 1406 aa14.48□□□□□ -0.09
PITRM1-202ENST00000380989 MAP3K5Q99683 1374 aa14.48□□□□□ -0.09
PITRM1-202ENST00000380989 HSP90AA1P07900 732 aaKnown RBP14.48□□□□□ -0.09
PITRM1-202ENST00000380989 L1TD1Q5T7N2 865 aaKnown RBP14.48□□□□□ -0.09
PITRM1-202ENST00000380989 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
PITRM1-202ENST00000380989 RBM42Q9BTD8 480 aaKnown RBP14.48□□□□□ -0.09
PITRM1-202ENST00000380989 IL16Q14005 1332 aa14.48□□□□□ -0.09
PITRM1-202ENST00000380989 FSD2A1L4K1 749 aa14.48□□□□□ -0.09
PITRM1-202ENST00000380989 CD2BP2O95400 341 aaKnown RBP14.48□□□□□ -0.09
PITRM1-202ENST00000380989 UPF2Q9HAU5 1272 aaKnown RBP14.48□□□□□ -0.09
PITRM1-202ENST00000380989 WDR17Q8IZU2 1322 aa14.48□□□□□ -0.09
PITRM1-202ENST00000380989 KCNQ3O43525 872 aa14.47□□□□□ -0.09
PITRM1-202ENST00000380989 RBM10P98175 930 aaKnown RBP14.47□□□□□ -0.09
PITRM1-202ENST00000380989 C22orf23Q9BZE7 217 aa14.47□□□□□ -0.09
PITRM1-202ENST00000380989 NCBP3Q53F19 620 aaKnown RBP14.47□□□□□ -0.09
PITRM1-202ENST00000380989 PLEKHO1Q53GL0 409 aaPredicted RBP14.47□□□□□ -0.09
PITRM1-202ENST00000380989 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
PITRM1-202ENST00000380989 TSPYL4Q9UJ04 414 aa14.47□□□□□ -0.09
PITRM1-202ENST00000380989 CHAMP1Q96JM3 812 aa14.47□□□□□ -0.09
PITRM1-202ENST00000380989 FAM208AQ9UK61 1670 aaKnown RBP14.46□□□□□ -0.09
PITRM1-202ENST00000380989 CHL1O00533 1208 aa14.46□□□□□ -0.09
PITRM1-202ENST00000380989 GRPEL1Q9HAV7 217 aa14.46□□□□□ -0.09
PITRM1-202ENST00000380989 LMO7Q8WWI1 1683 aa14.46□□□□□ -0.09
PITRM1-202ENST00000380989 VAMP4O75379 141 aa14.46□□□□□ -0.1
PITRM1-202ENST00000380989 TATP17735 454 aaPredicted RBP14.46□□□□□ -0.1
PITRM1-202ENST00000380989 TWISTNBQ3B726 338 aaPredicted RBP14.46□□□□□ -0.1
PITRM1-202ENST00000380989 C1orf141Q5JVX7 400 aa14.45□□□□□ -0.1
PITRM1-202ENST00000380989 CLCN1P35523 988 aa14.45□□□□□ -0.1
PITRM1-202ENST00000380989 DDX54Q8TDD1 881 aaKnown RBP14.45□□□□□ -0.1
PITRM1-202ENST00000380989 CYP27B1O15528 508 aa14.45□□□□□ -0.1
PITRM1-202ENST00000380989 CALD1Q05682 793 aaKnown RBP14.44□□□□□ -0.1
PITRM1-202ENST00000380989 NCAPD2Q15021 1401 aa14.44□□□□□ -0.1
PITRM1-202ENST00000380989 HSPA1LP34931 641 aa14.44□□□□□ -0.1
PITRM1-202ENST00000380989 AKAP4Q5JQC9 854 aa14.44□□□□□ -0.1
PITRM1-202ENST00000380989 ESPNB1AK53 854 aa14.43□□□□□ -0.1
PITRM1-202ENST00000380989 NOB1Q9ULX3 412 aaKnown RBP14.43□□□□□ -0.1
PITRM1-202ENST00000380989 C8orf37Q96NL8 207 aa14.43□□□□□ -0.1
PITRM1-202ENST00000380989 LNPKQ9C0E8 428 aa14.42□□□□□ -0.1
PITRM1-202ENST00000380989 AK9Q5TCS8 1911 aa14.42□□□□□ -0.1
PITRM1-202ENST00000380989 RNMTO43148 476 aaKnown RBP14.42□□□□□ -0.1
PITRM1-202ENST00000380989 SLC39A6Q13433 755 aa14.42□□□□□ -0.1
PITRM1-202ENST00000380989 PDE3AQ14432 1141 aa14.42□□□□□ -0.1
PITRM1-202ENST00000380989 AMOTQ4VCS5 1084 aa14.42□□□□□ -0.1
PITRM1-202ENST00000380989 TNPO1Q92973 898 aaKnown RBP14.42□□□□□ -0.1
PITRM1-202ENST00000380989 PRAMEF22A3QJZ6 481 aa14.41□□□□□ -0.1
PITRM1-202ENST00000380989 PHKG2P15735 406 aa14.41□□□□□ -0.1
PITRM1-202ENST00000380989 C1orf115Q9H7X2 142 aa14.41□□□□□ -0.1
PITRM1-202ENST00000380989 TEFQ10587 303 aa14.41□□□□□ -0.1
PITRM1-202ENST00000380989 TAF7Q15545 349 aaPredicted RBP14.41□□□□□ -0.1
PITRM1-202ENST00000380989 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
PITRM1-202ENST00000380989 CCDC9Q9Y3X0 531 aaKnown RBP14.41□□□□□ -0.1
PITRM1-202ENST00000380989 NFATC2IPQ8NCF5 419 aa14.4□□□□□ -0.1
PITRM1-202ENST00000380989 CARD10Q9BWT7 1032 aa14.4□□□□□ -0.1
PITRM1-202ENST00000380989 EP400Q96L91 3159 aa14.4□□□□□ -0.1
PITRM1-202ENST00000380989 FTSJ3Q8IY81 847 aaKnown RBP14.4□□□□□ -0.1
PITRM1-202ENST00000380989 CEMIPQ8WUJ3 1361 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 BTBD11A6QL63 1104 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 IL2RBP14784 551 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 TRIM27P14373 513 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 MPNDQ8N594 471 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 CHMP5Q9NZZ3 219 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 SPG7Q9UQ90 795 aa14.39□□□□□ -0.11
PITRM1-202ENST00000380989 KDM6AO15550 1401 aaPredicted RBP14.39□□□□□ -0.11
PITRM1-202ENST00000380989 COL22A1Q8NFW1 1626 aaPredicted RBP14.39□□□□□ -0.11
PITRM1-202ENST00000380989 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
PITRM1-202ENST00000380989 HTATSF1O43719 755 aaKnown RBP14.38□□□□□ -0.11
PITRM1-202ENST00000380989 ZCRB1Q8TBF4 217 aaKnown RBP14.38□□□□□ -0.11
PITRM1-202ENST00000380989 TRIM44Q96DX7 344 aaPredicted RBP14.38□□□□□ -0.11
PITRM1-202ENST00000380989 EIF2S2P20042 333 aaKnown RBP14.38□□□□□ -0.11
PITRM1-202ENST00000380989 IFNL2Q8IZJ0 200 aa14.37□□□□□ -0.11
PITRM1-202ENST00000380989 MRPL50Q8N5N7 158 aaKnown RBP14.37□□□□□ -0.11
PITRM1-202ENST00000380989 JARID2Q92833 1246 aaPredicted RBP14.37□□□□□ -0.11
PITRM1-202ENST00000380989 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
PITRM1-202ENST00000380989 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
PITRM1-202ENST00000380989 ANXA1P04083 346 aa14.37□□□□□ -0.11
PITRM1-202ENST00000380989 TPRNQ4KMQ1 711 aa14.37□□□□□ -0.11
PITRM1-202ENST00000380989 MRE11P49959 708 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 G2E3Q7L622 706 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 OVOS2A0A0G2JMS6 1433 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 SSFA2P28290 1259 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 KIAA1211Q6ZU35 1233 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 HSCBQ8IWL3 235 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 KAT6BQ8WYB5 2073 aa14.36□□□□□ -0.11
PITRM1-202ENST00000380989 NCLP19338 710 aaKnown RBP14.35□□□□□ -0.11
PITRM1-202ENST00000380989 FOXD4L5Q5VV16 416 aaPredicted RBP14.35□□□□□ -0.11
PITRM1-202ENST00000380989 FOXD4L4Q8WXT5 416 aaPredicted RBP14.35□□□□□ -0.11
PITRM1-202ENST00000380989 COL14A1Q05707 1796 aaKnown RBP14.35□□□□□ -0.11
PITRM1-202ENST00000380989 ABCC6O95255 1503 aa14.35□□□□□ -0.11
PITRM1-202ENST00000380989 PLCH1Q4KWH8 1693 aa14.35□□□□□ -0.11
PITRM1-202ENST00000380989 SLC4A2P04920 1241 aa14.35□□□□□ -0.11
PITRM1-202ENST00000380989 PKP1Q13835 747 aa14.35□□□□□ -0.11
PITRM1-202ENST00000380989 RWDD1Q9H446 243 aaPredicted RBP14.35□□□□□ -0.11
PITRM1-202ENST00000380989 LRP6O75581 1613 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms