RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 JMYQ8N9B5 988 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 BOLA2Q9H3K6 86 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 PDIA4P13667 645 aaKnown RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 SDSP20132 328 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 FBLN1P23142 703 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ZNF165P49910 485 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 RLBP1P12271 317 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ANO6Q4KMQ2 910 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 BBXQ8WY36 941 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 TSPYL1Q9H0U9 437 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC141Q6ZP82 1450 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ERLIN1O75477 346 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 NOL10Q9BSC4 688 aaKnown RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ZNF692Q9BU19 519 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 RALGAPBQ86X10 1494 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ZGPATQ8N5A5 531 aaKnown RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 SPINK5Q9NQ38 1064 aaPredicted RBP4.92□□□□□ -1.62
BRCA2-201ENST00000380152 GOLGA6L10A6NI86 522 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 OFD1O75665 1012 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 CEP57L1Q8IYX8 460 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 KIF1BPQ96EK5 621 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 ANO10Q9NW15 660 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 PLB1Q6P1J6 1458 aa4.92□□□□□ -1.62
BRCA2-201ENST00000380152 GPATCH11Q8N954 259 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 PLEKHH1Q9ULM0 1364 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 KIAA0754O94854 1291 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 ZFP91Q96JP5 570 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 DHX8Q14562 1220 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 SCAND2PQ9GZW5 306 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 DACH1Q9UI36 760 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 LIMCH1Q9UPQ0 1083 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 GTF2F1P35269 517 aaKnown RBP eCLIP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 SNX21Q969T3 373 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 TMX4Q9H1E5 349 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 MAGEC2Q9UBF1 373 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 PPP6R1Q9UPN7 881 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 CNPY2Q9Y2B0 182 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 POLR3DP05423 398 aaPredicted RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 RAPGEF4Q8WZA2 1011 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 PLCD4Q9BRC7 762 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 ZMYM4Q5VZL5 1548 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 PRPF40BQ6NWY9 871 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 TIGD1Q96MW7 591 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 GNAT3A8MTJ3 354 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 ZSCAN12O43309 604 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 CBFA2T2O43439 604 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 GLRX3O76003 335 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 SART3Q15020 963 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC158Q5M9N0 1113 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 SNW1Q13573 536 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 CRACR2AQ9BSW2 395 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 ZNHIT6Q9NWK9 470 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 RAPGEF6Q8TEU7 1601 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 PARD3Q8TEW0 1356 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 CCT2P78371 535 aaKnown RBP4.91□□□□□ -1.62
BRCA2-201ENST00000380152 WAPLQ7Z5K2 1190 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 TXLNAP40222 546 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 HSP90AB2PQ58FF8 381 aa4.91□□□□□ -1.62
BRCA2-201ENST00000380152 FAM83GA6ND36 823 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 KDM5AP29375 1690 aaKnown RBP4.9□□□□□ -1.62
BRCA2-201ENST00000380152 ARHGAP29Q52LW3 1261 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 TTC22Q5TAA0 569 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC69A6NI79 296 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 EPB41L2O43491 1005 aaKnown RBP4.9□□□□□ -1.62
BRCA2-201ENST00000380152 KLHL10Q6JEL2 608 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 BIN1O00499 593 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 DNM1Q05193 864 aaKnown RBP4.9□□□□□ -1.62
BRCA2-201ENST00000380152 ZFYVE27Q5T4F4 411 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC191Q8NCU4 936 aa4.9□□□□□ -1.62
BRCA2-201ENST00000380152 CCDC94Q9BW85 323 aaPredicted RBP4.9□□□□□ -1.62
BRCA2-201ENST00000380152 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.9□□□□□ -1.62
BRCA2-201ENST00000380152 V9GYY5 206 aaPredicted RBP4.9□□□□□ -1.62
BRCA2-201ENST00000380152 PPFIA3O75145 1194 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 TTC39AQ5SRH9 613 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 KIF5CO60282 957 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 ZSCAN22P10073 491 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 TOP1P11387 765 aaKnown RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 CT47A1Q5JQC4 288 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 ZSCAN31Q96LW9 406 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 MEIS3Q99687 375 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 EIF2AK4Q9P2K8 1649 aaKnown RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 DHX29Q7Z478 1369 aaKnown RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 LMAN1P49257 510 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 PTPRCP08575 1304 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 MAGI1Q96QZ7 1491 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 U2AF2P26368 475 aaKnown RBP eCLIP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 KRT32Q14532 448 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC8Q9H0W5 538 aaPredicted RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 CNNM1Q9NRU3 951 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 SCAF11Q99590 1463 aaKnown RBP4.9□□□□□ -1.63
BRCA2-201ENST00000380152 ZSWIM4Q9H7M6 989 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 KDM2BQ8NHM5 1336 aa4.9□□□□□ -1.63
BRCA2-201ENST00000380152 CCDC82Q8N4S0 544 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 HS1BP3Q53T59 392 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 HSP90AA4PQ58FG1 418 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 CNNM3Q8NE01 707 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 TBC1D2BQ9UPU7 963 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 ADGRF5Q8IZF2 1346 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 ABCC11Q96J66 1382 aa4.89□□□□□ -1.63
BRCA2-201ENST00000380152 KIF4BQ2VIQ3 1234 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms