RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 THEMISQ8N1K5 641 aaPredicted RBP9.08□□□□□ -0.96
CDKL5-201ENST00000379989 MPNDQ8N594 471 aa9.08□□□□□ -0.96
CDKL5-201ENST00000379989 ADAMTS8Q9UP79 889 aa9.08□□□□□ -0.96
CDKL5-201ENST00000379989 A0A1W2PP64 1363 aa9.08□□□□□ -0.96
CDKL5-201ENST00000379989 ICE2Q659A1 982 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 LRSAM1Q6UWE0 723 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 KIF18AQ8NI77 898 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 LMBRD1Q9NUN5 540 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 RBM27Q9P2N5 1060 aaKnown RBP9.07□□□□□ -0.96
CDKL5-201ENST00000379989 PDZRN3Q9UPQ7 1066 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 XRN1Q8IZH2 1706 aaKnown RBP9.07□□□□□ -0.96
CDKL5-201ENST00000379989 ADAMTS13Q76LX8 1427 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 FBXO31Q5XUX0 539 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-201ENST00000379989 KRT222Q8N1A0 295 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 DIAPH3Q9NSV4 1193 aa9.07□□□□□ -0.96
CDKL5-201ENST00000379989 COL3A1P02461 1466 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-201ENST00000379989 CDK12Q9NYV4 1490 aaPredicted RBP9.07□□□□□ -0.96
CDKL5-201ENST00000379989 BCAR3O75815 825 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 RNF214Q8ND24 703 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 ZNF428Q96B54 188 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 PRAM1Q96QH2 718 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 RASSF4Q9H2L5 321 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 KIF24Q5T7B8 1368 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 CCDC172P0C7W6 258 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 SLFN5Q08AF3 891 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 MCTP1Q6DN14 999 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 TMEM132EQ6IEE7 984 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 TTC12Q9H892 705 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-201ENST00000379989 NRKQ7Z2Y5 1582 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 WASLO00401 505 aaPredicted RBP9.06□□□□□ -0.96
CDKL5-201ENST00000379989 CYP2C19P33261 490 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 GYS2P54840 703 aa9.06□□□□□ -0.96
CDKL5-201ENST00000379989 SRPK2P78362 688 aaKnown RBP9.06□□□□□ -0.96
CDKL5-201ENST00000379989 NFATC2IPQ8NCF5 419 aa9.05□□□□□ -0.96
CDKL5-201ENST00000379989 SYCE3A1L190 88 aa9.05□□□□□ -0.96
CDKL5-201ENST00000379989 CD2BP2O95400 341 aaKnown RBP9.05□□□□□ -0.96
CDKL5-201ENST00000379989 GUCY2CP25092 1073 aa9.05□□□□□ -0.96
CDKL5-201ENST00000379989 GPT2Q8TD30 523 aa9.05□□□□□ -0.96
CDKL5-201ENST00000379989 SLC12A5Q9H2X9 1139 aa9.05□□□□□ -0.96
CDKL5-201ENST00000379989 CEP170BQ9Y4F5 1589 aaPredicted RBP9.05□□□□□ -0.96
CDKL5-201ENST00000379989 SETD1BQ9UPS6 1966 aaKnown RBP9.05□□□□□ -0.96
CDKL5-201ENST00000379989 IRF6O14896 467 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 SYCP1Q15431 976 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 CTR9Q6PD62 1173 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 CDK19Q9BWU1 502 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 FAM53CQ9NYF3 392 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 NALCNQ8IZF0 1738 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 CHAF1AQ13111 956 aaPredicted RBP9.04□□□□□ -0.96
CDKL5-201ENST00000379989 CREBRFQ8IUR6 639 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 CEP120Q8N960 986 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 ST7Q9NRC1 585 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 TMEM63CQ9P1W3 806 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 BRMS1Q9HCU9 246 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 CCDC61Q9Y6R9 512 aa9.04□□□□□ -0.96
CDKL5-201ENST00000379989 TTC21AQ8NDW8 1320 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 PLEKHG3A1L390 1219 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 SATB1Q01826 763 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 ZNF446Q9NWS9 450 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 COG6Q9Y2V7 657 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 PDE3AQ14432 1141 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 GPATCH11Q8N954 259 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 SLC26A8Q96RN1 970 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 TOMM22Q9NS69 142 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 NAA30Q147X3 362 aaPredicted RBP9.03□□□□□ -0.96
CDKL5-201ENST00000379989 GAS2L2Q8NHY3 880 aa9.03□□□□□ -0.96
CDKL5-201ENST00000379989 MCCP23508 829 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 POLKQ9UBT6 870 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 PCDHB15Q9Y5E8 787 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 PPIP5K1Q6PFW1 1433 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 FCHSD2O94868 740 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 PMFBP1Q8TBY8 1022 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 PANK1Q8TE04 598 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 KIF16BQ96L93 1317 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 STRCQ7RTU9 1775 aa9.02□□□□□ -0.97
CDKL5-201ENST00000379989 K7ELQ4 463 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-201ENST00000379989 TRIM66O15016 1216 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 CASQ1P31415 396 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 TSGA10IPQ3SY00 556 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 REC8O95072 547 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 TICAM2Q86XR7 235 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 KIF2CQ99661 725 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 METP08581 1390 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 NBPF20Q3BBV1 942 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 C10orf67Q8IYJ2 551 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 KIAA1524Q8TCG1 905 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 STK26Q9P289 416 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 NSFL1CQ9UNZ2 370 aaKnown RBP9.01□□□□□ -0.97
CDKL5-201ENST00000379989 USP31Q70CQ4 1352 aa9.01□□□□□ -0.97
CDKL5-201ENST00000379989 FYB1O15117 783 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 PRPF40AO75400 957 aaKnown RBP9□□□□□ -0.97
CDKL5-201ENST00000379989 HSP90AB3PQ58FF7 597 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 CABP2Q9NPB3 220 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 DONSONQ9NYP3 566 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 ZKSCAN7Q9P0L1 754 aaPredicted RBP9□□□□□ -0.97
CDKL5-201ENST00000379989 RAD50Q92878 1312 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 MYO1CO00159 1063 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 MTHFSP49914 203 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 SYT10Q6XYQ8 523 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 MUM1L1Q5H9M0 696 aa9□□□□□ -0.97
CDKL5-201ENST00000379989 RNF217Q8TC41 542 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms