RNA–Protein interactions for RNA: ENST00000379600.7

NHLRC3-202, Transcript of NHL repeat containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC3, Length 3,549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-202ENST00000379600 MCM5P33992 734 aa11.41□□□□□ -0.58
NHLRC3-202ENST00000379600 UNC5CLQ8IV45 518 aa11.41□□□□□ -0.58
NHLRC3-202ENST00000379600 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.41□□□□□ -0.58
NHLRC3-202ENST00000379600 FAM208AQ9UK61 1670 aaKnown RBP11.41□□□□□ -0.58
NHLRC3-202ENST00000379600 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
NHLRC3-202ENST00000379600 SPATA31D1Q6ZQQ2 1576 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 FOXO3O43524 673 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 MBD3O95983 291 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 CHMLP26374 656 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 NOL8Q76FK4 1167 aaKnown RBP11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 TXNDC2Q86VQ3 553 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 GDPD2Q9HCC8 539 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 PNMA6EA0A0J9YXQ4 647 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 OVOS2A0A0J9YW53 1432 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 OVOS2Q6IE36 1432 aa11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 N4BP2Q86UW6 1770 aaPredicted RBP11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.4□□□□□ -0.58
NHLRC3-202ENST00000379600 HSP90AB2PQ58FF8 381 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 SLC4A10Q6U841 1118 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 INTS4Q96HW7 963 aaKnown RBP11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 RPAP1Q9BWH6 1393 aaPredicted RBP11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 TOPAZ1Q8N9V7 1692 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 JARID2Q92833 1246 aaPredicted RBP11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 TSPY26PQ9H489 355 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 STAG3Q9UJ98 1225 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 CCDC61Q9Y6R9 512 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 FOXD4L6Q3SYB3 417 aaPredicted RBP11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 FOXD4L3Q6VB84 417 aaPredicted RBP11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 FMN2Q9NZ56 1722 aa11.39□□□□□ -0.59
NHLRC3-202ENST00000379600 HMMRO75330 724 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 MX1P20591 662 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 MCM2P49736 904 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 USP48Q86UV5 1035 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 PRDM4Q9UKN5 801 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 CSPP1Q1MSJ5 1256 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 SASS6Q6UVJ0 657 aa11.38□□□□□ -0.59
NHLRC3-202ENST00000379600 LRRC37A3O60309 1634 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 TECPR2O15040 1411 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 CCT4P50991 539 aaKnown RBP11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 ANAPC15P60006 121 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 ANO2Q9NQ90 1003 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 SSH2Q76I76 1423 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 DYNC1I1O14576 645 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 HAP1P54257 671 aaPredicted RBP11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 MPNDQ8N594 471 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 LRRCC1Q9C099 1032 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 STAP2Q9UGK3 403 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 MAP3K19Q56UN5 1328 aa11.37□□□□□ -0.59
NHLRC3-202ENST00000379600 GNAI2P04899 355 aa11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 MTHFSDQ2M296 383 aaKnown RBP11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 ZNF830Q96NB3 372 aaPredicted RBP11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 RILPL2Q969X0 211 aa11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 SRCIN1Q9C0H9 1055 aa11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 TTC21BQ7Z4L5 1316 aa11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 CEP170BQ9Y4F5 1589 aaPredicted RBP11.36□□□□□ -0.59
NHLRC3-202ENST00000379600 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
NHLRC3-202ENST00000379600 ARHGEF10O15013 1369 aa11.35□□□□□ -0.59
NHLRC3-202ENST00000379600 HSPA4P34932 840 aa11.35□□□□□ -0.59
NHLRC3-202ENST00000379600 TMEM87AQ8NBN3 555 aa11.35□□□□□ -0.59
NHLRC3-202ENST00000379600 MAP7D2Q96T17 732 aa11.35□□□□□ -0.59
NHLRC3-202ENST00000379600 C17orf53Q8N3J3 647 aaPredicted RBP11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 TSPYL4Q9UJ04 414 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 CRYBG1Q9Y4K1 1723 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 USP31Q70CQ4 1352 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 TRIM6-TRIM34B2RNG4 842 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 TSC1Q92574 1164 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 CNPY2Q9Y2B0 182 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 ZBTB7CA1YPR0 619 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 KIAA2012Q0VF49 1180 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 ZNF710Q8N1W2 664 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 USP25Q9UHP3 1055 aa11.34□□□□□ -0.59
NHLRC3-202ENST00000379600 TTC14Q96N46 770 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 ARID3AQ99856 593 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 LRRFIP2Q9Y608 721 aaKnown RBP11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 AP5Z1O43299 807 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 MCCP23508 829 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 FLIIQ13045 1269 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 USP6P35125 1406 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 ACEP12821 1306 aa11.33□□□□□ -0.6
NHLRC3-202ENST00000379600 MYRIPQ8NFW9 859 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 KDRP35968 1356 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 WDR33Q9C0J8 1336 aaKnown RBP11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 DTNBO60941 627 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 PIBF1Q8WXW3 757 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 LARP6Q9BRS8 491 aaKnown RBP11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 TTC12Q9H892 705 aaPredicted RBP11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 IL1RAPL2Q9NP60 686 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 CACNA1FO60840 1977 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 MAP4K4O95819 1239 aaPredicted RBP11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 RASEFQ8IZ41 740 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 PI4K2BQ8TCG2 481 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 SYAP1Q96A49 352 aaPredicted RBP11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 SIRT1Q96EB6 747 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 FUCA2Q9BTY2 467 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 USP44Q9H0E7 712 aa11.32□□□□□ -0.6
NHLRC3-202ENST00000379600 AGLP35573 1532 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms