RNA–Protein interactions for RNA: ENST00000379538.7

SNCAIP-203, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 2,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-203ENST00000379538 TPM2P07951 284 aa17.15■□□□□ 0.34
SNCAIP-203ENST00000379538 AAMPQ13685 434 aa17.15■□□□□ 0.34
SNCAIP-203ENST00000379538 PXDNQ92626 1479 aa17.15■□□□□ 0.34
SNCAIP-203ENST00000379538 KIAA0232Q92628 1395 aa17.14■□□□□ 0.34
SNCAIP-203ENST00000379538 ATF7IPQ6VMQ6 1270 aa17.14■□□□□ 0.33
SNCAIP-203ENST00000379538 ZSCAN30Q86W11 494 aa17.14■□□□□ 0.33
SNCAIP-203ENST00000379538 PKP1Q13835 747 aa17.14■□□□□ 0.33
SNCAIP-203ENST00000379538 SNX21Q969T3 373 aa17.14■□□□□ 0.33
SNCAIP-203ENST00000379538 MBIPQ9NS73 344 aa17.13■□□□□ 0.33
SNCAIP-203ENST00000379538 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
SNCAIP-203ENST00000379538 NLRP2Q9NX02 1062 aa17.13■□□□□ 0.33
SNCAIP-203ENST00000379538 TNS3Q68CZ2 1445 aa17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 ZBTB40Q9NUA8 1239 aa17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 DDX19BQ9UMR2 479 aa17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 RGPD2P0DJD1 1756 aa17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 MSNP26038 577 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 CAVIN1Q6NZI2 390 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 ISY1Q9ULR0 285 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-203ENST00000379538 SOS2Q07890 1332 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 NUCB1Q02818 461 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 CCDC173Q0VFZ6 552 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 MCTP1Q6DN14 999 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 CHD1LQ86WJ1 897 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 OFD1O75665 1012 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 PPP1R9BQ96SB3 815 aa17.11■□□□□ 0.33
SNCAIP-203ENST00000379538 ARHGEF10O15013 1369 aa17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 DLG5Q8TDM6 1919 aa17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 BAG4O95429 457 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 TBC1D9Q6ZT07 1266 aa17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 C8orf58Q8NAV2 365 aa17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 NHSL1Q5SYE7 1610 aa17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 RBM27Q9P2N5 1060 aaKnown RBP17.1■□□□□ 0.33
SNCAIP-203ENST00000379538 KDRP35968 1356 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 RGPD5Q99666 1765 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 SKOR2Q2VWA4 1001 aaPredicted RBP17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 PRDM11Q9NQV5 511 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 ERBB3P21860 1342 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 ALS2Q96Q42 1657 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 RGPD1P0DJD0 1748 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 RBSNQ9H1K0 784 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 LGR6Q9HBX8 967 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
SNCAIP-203ENST00000379538 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-203ENST00000379538 JARID2Q92833 1246 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-203ENST00000379538 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-203ENST00000379538 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
SNCAIP-203ENST00000379538 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
SNCAIP-203ENST00000379538 SLIT3O75094 1523 aa17.07■□□□□ 0.32
SNCAIP-203ENST00000379538 FOXD4L5Q5VV16 416 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-203ENST00000379538 FOXD4L4Q8WXT5 416 aaPredicted RBP17.07■□□□□ 0.32
SNCAIP-203ENST00000379538 PRIM1P49642 420 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 MPNDQ8N594 471 aa17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 KLHL40Q2TBA0 621 aa17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 RTF1Q92541 710 aaKnown RBP17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 PRDM10Q9NQV6 1147 aa17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 PRDM4Q9UKN5 801 aa17.06■□□□□ 0.32
SNCAIP-203ENST00000379538 ZSCAN23Q3MJ62 389 aa17.05■□□□□ 0.32
SNCAIP-203ENST00000379538 CFAP44Q96MT7 982 aa17.05■□□□□ 0.32
SNCAIP-203ENST00000379538 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
SNCAIP-203ENST00000379538 UQCRHLA0A096LP55 91 aa17.04■□□□□ 0.32
SNCAIP-203ENST00000379538 ADAMTS2O95450 1211 aa17.04■□□□□ 0.32
SNCAIP-203ENST00000379538 UQCRHP07919 91 aa17.04■□□□□ 0.32
SNCAIP-203ENST00000379538 ZNF853P0CG23 659 aa17.04■□□□□ 0.32
SNCAIP-203ENST00000379538 GNAT3A8MTJ3 354 aa17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 BMP2KLQ5H9B9 411 aa17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 AHDC1Q5TGY3 1603 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 GNAI1P63096 354 aa17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 NSFL1CQ9UNZ2 370 aaKnown RBP17.03■□□□□ 0.32
SNCAIP-203ENST00000379538 ZGPATQ8N5A5 531 aaKnown RBP17.02■□□□□ 0.32
SNCAIP-203ENST00000379538 IFT57Q9NWB7 429 aa17.02■□□□□ 0.32
SNCAIP-203ENST00000379538 KIF24Q5T7B8 1368 aa17.02■□□□□ 0.32
SNCAIP-203ENST00000379538 VAMP4O75379 141 aa17.02■□□□□ 0.31
SNCAIP-203ENST00000379538 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.02■□□□□ 0.31
SNCAIP-203ENST00000379538 RNF214Q8ND24 703 aa17.02■□□□□ 0.31
SNCAIP-203ENST00000379538 UBAP1LF5GYI3 381 aa17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 KCNQ3O43525 872 aa17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 LARP1Q6PKG0 1096 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 SIRT2Q8IXJ6 389 aa17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 TSC1Q92574 1164 aa17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 CALD1Q05682 793 aaKnown RBP17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 TWISTNBQ3B726 338 aaPredicted RBP17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 TSPYL4Q9UJ04 414 aa17.01■□□□□ 0.31
SNCAIP-203ENST00000379538 IL16Q14005 1332 aa17■□□□□ 0.31
SNCAIP-203ENST00000379538 PHRF1Q9P1Y6 1649 aaKnown RBP17■□□□□ 0.31
SNCAIP-203ENST00000379538 LMOD3Q0VAK6 560 aa17■□□□□ 0.31
SNCAIP-203ENST00000379538 TOM1L2Q6ZVM7 507 aa17■□□□□ 0.31
SNCAIP-203ENST00000379538 C16orf71Q8IYS4 520 aaPredicted RBP17■□□□□ 0.31
SNCAIP-203ENST00000379538 GPT2Q8TD30 523 aa17■□□□□ 0.31
SNCAIP-203ENST00000379538 ROBO1Q9Y6N7 1651 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms