RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 PLEKHO1Q53GL0 409 aaPredicted RBP18.54■□□□□ 0.56
PRNP-201ENST00000379440 MST1RQ04912 1400 aa18.54■□□□□ 0.56
PRNP-201ENST00000379440 KCNQ3O43525 872 aa18.54■□□□□ 0.56
PRNP-201ENST00000379440 CCT4P50991 539 aaKnown RBP18.54■□□□□ 0.56
PRNP-201ENST00000379440 BMP2KLQ5H9B9 411 aa18.54■□□□□ 0.56
PRNP-201ENST00000379440 AKAP4Q5JQC9 854 aa18.53■□□□□ 0.56
PRNP-201ENST00000379440 VSIG10Q8N0Z9 540 aa18.53■□□□□ 0.56
PRNP-201ENST00000379440 C22orf23Q9BZE7 217 aa18.53■□□□□ 0.56
PRNP-201ENST00000379440 HDGFL1Q5TGJ6 251 aa18.53■□□□□ 0.56
PRNP-201ENST00000379440 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
PRNP-201ENST00000379440 KIF1AQ12756 1690 aa18.53■□□□□ 0.56
PRNP-201ENST00000379440 APBB1O00213 710 aa18.52■□□□□ 0.55
PRNP-201ENST00000379440 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.55
PRNP-201ENST00000379440 FAM208AQ9UK61 1670 aaKnown RBP18.51■□□□□ 0.55
PRNP-201ENST00000379440 EIF2S2P20042 333 aaKnown RBP18.51■□□□□ 0.55
PRNP-201ENST00000379440 PHAXQ9H814 394 aaKnown RBP18.51■□□□□ 0.55
PRNP-201ENST00000379440 TEFQ10587 303 aa18.51■□□□□ 0.55
PRNP-201ENST00000379440 AMOTQ4VCS5 1084 aa18.51■□□□□ 0.55
PRNP-201ENST00000379440 PXDNQ92626 1479 aa18.51■□□□□ 0.55
PRNP-201ENST00000379440 SMARCA5O60264 1052 aaPredicted RBP18.5■□□□□ 0.55
PRNP-201ENST00000379440 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
PRNP-201ENST00000379440 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
PRNP-201ENST00000379440 CABLES1Q8TDN4 633 aa18.5■□□□□ 0.55
PRNP-201ENST00000379440 MED1Q15648 1581 aaPredicted RBP18.5■□□□□ 0.55
PRNP-201ENST00000379440 SOS1Q07889 1333 aaPredicted RBP18.5■□□□□ 0.55
PRNP-201ENST00000379440 BTBD11A6QL63 1104 aa18.49■□□□□ 0.55
PRNP-201ENST00000379440 PDE4CQ08493 712 aa18.49■□□□□ 0.55
PRNP-201ENST00000379440 BECN1Q14457 450 aa18.49■□□□□ 0.55
PRNP-201ENST00000379440 C1orf141Q5JVX7 400 aa18.49■□□□□ 0.55
PRNP-201ENST00000379440 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
PRNP-201ENST00000379440 RNMTO43148 476 aaKnown RBP18.49■□□□□ 0.55
PRNP-201ENST00000379440 OTUD7AQ8TE49 926 aaPredicted RBP18.49■□□□□ 0.55
PRNP-201ENST00000379440 RGPD5Q99666 1765 aa18.49■□□□□ 0.55
PRNP-201ENST00000379440 ALS2Q96Q42 1657 aa18.48■□□□□ 0.55
PRNP-201ENST00000379440 ERBB3P21860 1342 aa18.48■□□□□ 0.55
PRNP-201ENST00000379440 GSPT1P15170 499 aaKnown RBP18.47■□□□□ 0.55
PRNP-201ENST00000379440 TBC1D2Q9BYX2 928 aa18.47■□□□□ 0.55
PRNP-201ENST00000379440 LMO7Q8WWI1 1683 aa18.47■□□□□ 0.55
PRNP-201ENST00000379440 GNAI2P04899 355 aa18.47■□□□□ 0.55
PRNP-201ENST00000379440 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
PRNP-201ENST00000379440 CADPS2Q86UW7 1296 aa18.46■□□□□ 0.55
PRNP-201ENST00000379440 CHPF2Q9P2E5 772 aa18.46■□□□□ 0.55
PRNP-201ENST00000379440 NFKBIBQ15653 356 aa18.46■□□□□ 0.54
PRNP-201ENST00000379440 TBC1D9Q6ZT07 1266 aa18.46■□□□□ 0.54
PRNP-201ENST00000379440 ANXA1P04083 346 aa18.45■□□□□ 0.54
PRNP-201ENST00000379440 NLRP2Q9NX02 1062 aa18.45■□□□□ 0.54
PRNP-201ENST00000379440 DCCP43146 1447 aa18.45■□□□□ 0.54
PRNP-201ENST00000379440 HMMRO75330 724 aa18.45■□□□□ 0.54
PRNP-201ENST00000379440 KDM3BQ7LBC6 1761 aa18.44■□□□□ 0.54
PRNP-201ENST00000379440 SLKQ9H2G2 1235 aaPredicted RBP18.44■□□□□ 0.54
PRNP-201ENST00000379440 NPHP3Q7Z494 1330 aa18.44■□□□□ 0.54
PRNP-201ENST00000379440 CHRNA2Q15822 529 aa18.44■□□□□ 0.54
PRNP-201ENST00000379440 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 GNAI3P08754 354 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 USP44Q9H0E7 712 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 CACNA1FO60840 1977 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 PNMA6EA0A0J9YXQ4 647 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 TTC22Q5TAA0 569 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 USP35Q9P2H5 1018 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 EXOC6BQ9Y2D4 811 aa18.43■□□□□ 0.54
PRNP-201ENST00000379440 CAMTA1Q9Y6Y1 1673 aa18.42■□□□□ 0.54
PRNP-201ENST00000379440 HOXB7P09629 217 aa18.42■□□□□ 0.54
PRNP-201ENST00000379440 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
PRNP-201ENST00000379440 FGD1P98174 961 aa18.42■□□□□ 0.54
PRNP-201ENST00000379440 PRAMEF22A3QJZ6 481 aa18.41■□□□□ 0.54
PRNP-201ENST00000379440 RBM25P49756 843 aaKnown RBP18.41■□□□□ 0.54
PRNP-201ENST00000379440 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
PRNP-201ENST00000379440 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
PRNP-201ENST00000379440 CDC45O75419 566 aa18.4■□□□□ 0.54
PRNP-201ENST00000379440 CSB-PGBD3P0DP91 1061 aa18.4■□□□□ 0.54
PRNP-201ENST00000379440 ATP8B2P98198 1209 aa18.4■□□□□ 0.54
PRNP-201ENST00000379440 A0A0U1RQG5 324 aaPredicted RBP18.4■□□□□ 0.54
PRNP-201ENST00000379440 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
PRNP-201ENST00000379440 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
PRNP-201ENST00000379440 TNS3Q68CZ2 1445 aa18.4■□□□□ 0.54
PRNP-201ENST00000379440 GIGYF1O75420 1035 aaPredicted RBP18.39■□□□□ 0.54
PRNP-201ENST00000379440 SPATA31A3Q5VYP0 1347 aa18.39■□□□□ 0.53
PRNP-201ENST00000379440 UBTFL1P0CB47 393 aaPredicted RBP18.39■□□□□ 0.53
PRNP-201ENST00000379440 SRCIN1Q9C0H9 1055 aa18.39■□□□□ 0.53
PRNP-201ENST00000379440 PXDNLA1KZ92 1463 aa18.38■□□□□ 0.53
PRNP-201ENST00000379440 FRAT2O75474 233 aaPredicted RBP18.38■□□□□ 0.53
PRNP-201ENST00000379440 TATP17735 454 aaPredicted RBP18.37■□□□□ 0.53
PRNP-201ENST00000379440 PROSER3Q2NL68 480 aa18.37■□□□□ 0.53
PRNP-201ENST00000379440 BRINP3Q76B58 766 aa18.37■□□□□ 0.53
PRNP-201ENST00000379440 SDSP20132 328 aa18.37■□□□□ 0.53
PRNP-201ENST00000379440 DNAAF4Q8WXU2 420 aa18.37■□□□□ 0.53
PRNP-201ENST00000379440 ANTXR1Q9H6X2 564 aa18.37■□□□□ 0.53
PRNP-201ENST00000379440 OVOS2A0A0G2JMS6 1433 aa18.37■□□□□ 0.53
PRNP-201ENST00000379440 COL18A1P39060 1754 aa18.36■□□□□ 0.53
PRNP-201ENST00000379440 SLC39A6Q13433 755 aa18.36■□□□□ 0.53
PRNP-201ENST00000379440 BEND3Q5T5X7 828 aa18.36■□□□□ 0.53
PRNP-201ENST00000379440 DBF4Q9UBU7 674 aaPredicted RBP18.36■□□□□ 0.53
PRNP-201ENST00000379440 NBPF7P0C2Y1 421 aaPredicted RBP18.36■□□□□ 0.53
PRNP-201ENST00000379440 MEGF6O75095 1541 aa18.36■□□□□ 0.53
PRNP-201ENST00000379440 KIF2CQ99661 725 aa18.36■□□□□ 0.53
PRNP-201ENST00000379440 HEG1Q9ULI3 1381 aa18.36■□□□□ 0.53
PRNP-201ENST00000379440 XIRP1Q702N8 1843 aaKnown RBP18.35■□□□□ 0.53
PRNP-201ENST00000379440 ADCY9O60503 1353 aa18.35■□□□□ 0.53
PRNP-201ENST00000379440 KDM4FA0A1W2PPD8 638 aa18.35■□□□□ 0.53
PRNP-201ENST00000379440 PHKG2P15735 406 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms