RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 GTPBP4Q9BZE4 634 aaKnown RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 PTPRGP23470 1445 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC117Q8IWD4 279 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 ZMYND15Q9H091 742 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 NEK4P51957 841 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 KRT85P78386 507 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 SPC24Q8NBT2 197 aa13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 TTC12Q9H892 705 aaPredicted RBP13.03□□□□□ -0.32
PTCHD1-201ENST00000379361 LMAN1P49257 510 aa13.02□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC12Q8WUD4 166 aaPredicted RBP13.02□□□□□ -0.32
PTCHD1-201ENST00000379361 APAF1O14727 1248 aa13.02□□□□□ -0.32
PTCHD1-201ENST00000379361 CCDC196A0A1B0GTZ2 297 aa13.02□□□□□ -0.33
PTCHD1-201ENST00000379361 POLR3GO15318 223 aaPredicted RBP13.02□□□□□ -0.33
PTCHD1-201ENST00000379361 L3MBTL2Q969R5 705 aa13.02□□□□□ -0.33
PTCHD1-201ENST00000379361 NCBP1Q09161 790 aaKnown RBP13.02□□□□□ -0.33
PTCHD1-201ENST00000379361 PPP1R14CQ8TAE6 165 aa13.02□□□□□ -0.33
PTCHD1-201ENST00000379361 AACSQ86V21 672 aa13.02□□□□□ -0.33
PTCHD1-201ENST00000379361 KIF2AO00139 706 aaPredicted RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 KIF20AO95235 890 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 HMGB1P09429 215 aaKnown RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 CACNA2D4Q7Z3S7 1137 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 GBP3Q9H0R5 595 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 ARL1P40616 181 aaPredicted RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 OTUD6BQ8N6M0 293 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 SPECC1LQ69YQ0 1117 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 B4DLN1 442 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 USO1O60763 962 aaKnown RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 MRPL12P52815 198 aaKnown RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 SPATA32Q96LK8 384 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 MYO1BO43795 1136 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 CEP135Q66GS9 1140 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 HMGB1P1B2RPK0 211 aaPredicted RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 NAA15Q9BXJ9 866 aaKnown RBP13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 SH3BP5O60239 455 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 CCDC96Q2M329 555 aa13.01□□□□□ -0.33
PTCHD1-201ENST00000379361 UPF3BQ9BZI7 483 aaKnown RBP13□□□□□ -0.33
PTCHD1-201ENST00000379361 ZNF354CQ86Y25 554 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 STK3Q13188 491 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 DAAM2Q86T65 1068 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 FAM177A1Q8N128 213 aaPredicted RBP13□□□□□ -0.33
PTCHD1-201ENST00000379361 VTI1AQ96AJ9 217 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13□□□□□ -0.33
PTCHD1-201ENST00000379361 SAMM50Q9Y512 469 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 LARP1BQ659C4 914 aaKnown RBP13□□□□□ -0.33
PTCHD1-201ENST00000379361 PLVAPQ9BX97 442 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 MKNK2Q9HBH9 465 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 CBX1P83916 185 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 PRPF31Q8WWY3 499 aaKnown RBP13□□□□□ -0.33
PTCHD1-201ENST00000379361 CEP126Q9P2H0 1117 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 MYL6BP14649 208 aa13□□□□□ -0.33
PTCHD1-201ENST00000379361 CCDC172P0C7W6 258 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 KIF5BP33176 963 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 KIF5CO60282 957 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 PROSER2Q86WR7 435 aaPredicted RBP12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 SIL1Q9H173 461 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 DHX37Q8IY37 1157 aaKnown RBP12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 SYCP3Q8IZU3 236 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 MYH9P35579 1960 aaKnown RBP12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 PRC1O43663 620 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 BICD1Q96G01 975 aa12.99□□□□□ -0.33
PTCHD1-201ENST00000379361 RFX1P22670 979 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 ZNF444Q8N0Y2 327 aaPredicted RBP12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 ZSCAN31Q96LW9 406 aaPredicted RBP12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 PRDM11Q9NQV5 511 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 POGZQ7Z3K3 1410 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 GAS8O95995 478 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 ZNF530Q6P9A1 599 aaPredicted RBP12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 USP37Q86T82 979 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 SNX16P57768 344 aa12.98□□□□□ -0.33
PTCHD1-201ENST00000379361 CASQ1P31415 396 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 CCDC178Q5BJE1 867 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 GMNNO75496 209 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 BAG4O95429 457 aaKnown RBP12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 IFIT1P09914 478 aaKnown RBP12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 FHOD3Q2V2M9 1422 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 PPP6R1Q9UPN7 881 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 TBC1D5Q92609 795 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 KAT6AQ92794 2004 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 IFI16Q16666 785 aaKnown RBP12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 CFAP100Q494V2 611 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 UBXN4Q92575 508 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 CCDC14Q49A88 953 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 CCDC174Q6PII3 467 aa12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 PUF60Q9UHX1 559 aaKnown RBP12.97□□□□□ -0.33
PTCHD1-201ENST00000379361 METTL24Q5JXM2 366 aa12.96□□□□□ -0.33
PTCHD1-201ENST00000379361 FAM114A1Q8IWE2 563 aa12.96□□□□□ -0.33
PTCHD1-201ENST00000379361 CATIPQ7Z7H3 387 aa12.96□□□□□ -0.33
PTCHD1-201ENST00000379361 EXOC6Q8TAG9 804 aa12.96□□□□□ -0.33
PTCHD1-201ENST00000379361 KIF5AQ12840 1032 aa12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 CTCFLQ8NI51 663 aaPredicted RBP12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 PAFAH1B1P43034 410 aa12.96□□□□□ -0.34
PTCHD1-201ENST00000379361 BTBD11A6QL63 1104 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms