RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 CACNA2D4Q7Z3S7 1137 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 JAKMIP1Q96N16 626 aaKnown RBP13.19□□□□□ -0.3
ITM2B-202ENST00000378565 NUTM2FA1L443 756 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 VGFO15240 615 aaPredicted RBP13.19□□□□□ -0.3
ITM2B-202ENST00000378565 MVPQ14764 893 aaKnown RBP13.19□□□□□ -0.3
ITM2B-202ENST00000378565 CCDC121Q6ZUS5 278 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 HMOX1P09601 288 aa13.19□□□□□ -0.3
ITM2B-202ENST00000378565 DDX12PQ92771 950 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 A0A1B0GUA9 196 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 MICALL1Q8N3F8 863 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 KIF3CO14782 793 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 TUBB4BP68371 445 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 JADE2Q9NQC1 790 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 MSH5O43196 834 aa13.18□□□□□ -0.3
ITM2B-202ENST00000378565 CCDC97Q96F63 343 aaPredicted RBP13.18□□□□□ -0.3
ITM2B-202ENST00000378565 SH2B1Q9NRF2 756 aaPredicted RBP13.17□□□□□ -0.3
ITM2B-202ENST00000378565 CKAP4Q07065 602 aaKnown RBP13.17□□□□□ -0.3
ITM2B-202ENST00000378565 TTC39AQ5SRH9 613 aa13.17□□□□□ -0.3
ITM2B-202ENST00000378565 TNPO1Q92973 898 aaKnown RBP13.17□□□□□ -0.3
ITM2B-202ENST00000378565 CDCA7LQ96GN5 454 aa13.17□□□□□ -0.3
ITM2B-202ENST00000378565 RAPGEF2Q9Y4G8 1499 aa13.17□□□□□ -0.3
ITM2B-202ENST00000378565 AIMP1Q12904 312 aaKnown RBP13.17□□□□□ -0.3
ITM2B-202ENST00000378565 KLHL10Q6JEL2 608 aa13.17□□□□□ -0.3
ITM2B-202ENST00000378565 NAA25Q14CX7 972 aa13.17□□□□□ -0.3
ITM2B-202ENST00000378565 STMN4Q9H169 189 aaPredicted RBP13.17□□□□□ -0.3
ITM2B-202ENST00000378565 KIF5BP33176 963 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 CCDC158Q5M9N0 1113 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 CTNNBL1Q8WYA6 563 aaPredicted RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 GNL3LQ9NVN8 582 aaKnown RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 WASHC2AQ641Q2 1341 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 ZFYP08048 801 aaPredicted RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 FERP16591 822 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 MCM6Q14566 821 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 TMC6Q7Z403 805 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 SREK1Q8WXA9 508 aaKnown RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 CTNNA3Q9UI47 895 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 IKBKGQ9Y6K9 419 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 NOL3O60936 208 aaKnown RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 LARP1Q6PKG0 1096 aaKnown RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 SMAP1Q8IYB5 467 aaPredicted RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 KIF4AO95239 1232 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 EVA1CP58658 441 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 OTUD6BQ8N6M0 293 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 TSG101Q99816 390 aa13.16□□□□□ -0.3
ITM2B-202ENST00000378565 HNRNPMP52272 730 aaKnown RBP eCLIP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 CCDC12Q8WUD4 166 aaPredicted RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 SRRTQ9BXP5 876 aaKnown RBP13.16□□□□□ -0.3
ITM2B-202ENST00000378565 OPA1O60313 960 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 SSBP05455 408 aaKnown RBP eCLIP13.15□□□□□ -0.3
ITM2B-202ENST00000378565 DDX19AQ9NUU7 478 aaKnown RBP13.15□□□□□ -0.3
ITM2B-202ENST00000378565 UVSSAQ2YD98 709 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 CCDC155Q8N6L0 562 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 MIPOL1Q8TD10 442 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 DNA2P51530 1060 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 TCP11L2Q8N4U5 519 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 NUP133Q8WUM0 1156 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 TTC14Q96N46 770 aa13.15□□□□□ -0.3
ITM2B-202ENST00000378565 A0A1W2PRG0 241 aa13.15□□□□□ -0.31
ITM2B-202ENST00000378565 MACROD2A1Z1Q3 448 aa13.15□□□□□ -0.31
ITM2B-202ENST00000378565 KIF20AO95235 890 aa13.15□□□□□ -0.31
ITM2B-202ENST00000378565 LIG1P18858 919 aa13.15□□□□□ -0.31
ITM2B-202ENST00000378565 CWC27Q6UX04 472 aaKnown RBP13.14□□□□□ -0.31
ITM2B-202ENST00000378565 PHAXQ9H814 394 aaKnown RBP13.14□□□□□ -0.31
ITM2B-202ENST00000378565 HOMER2Q9NSB8 354 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 PPP1R14CQ8TAE6 165 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 UBAC1Q9BSL1 405 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 ATP2C2O75185 946 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 GNG11P61952 73 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 PLCD3Q8N3E9 789 aa13.14□□□□□ -0.31
ITM2B-202ENST00000378565 CKAP2LQ8IYA6 745 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 GRIPAP1Q4V328 841 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 DNAJC21Q5F1R6 531 aaKnown RBP13.13□□□□□ -0.31
ITM2B-202ENST00000378565 PAIP2Q9BPZ3 127 aaKnown RBP13.13□□□□□ -0.31
ITM2B-202ENST00000378565 TUBB4AP04350 444 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 C10orf67Q8IYJ2 551 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 CTAGE9A4FU28 777 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 DNAI2Q9GZS0 605 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
ITM2B-202ENST00000378565 ZWINTO95229 277 aa13.13□□□□□ -0.31
ITM2B-202ENST00000378565 MATR3P43243 847 aaKnown RBP eCLIP13.12□□□□□ -0.31
ITM2B-202ENST00000378565 MXRA7P84157 204 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 STIM2Q9P246 746 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 SERPINA10Q9UK55 444 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 UBE2HP62256 183 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 HS1BP3Q53T59 392 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 ATRIPQ8WXE1 791 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 SYTL4Q96C24 671 aaPredicted RBP13.12□□□□□ -0.31
ITM2B-202ENST00000378565 TMX1Q9H3N1 280 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
ITM2B-202ENST00000378565 KLHL40Q2TBA0 621 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 CCDC114Q96M63 670 aa13.12□□□□□ -0.31
ITM2B-202ENST00000378565 SMC6Q96SB8 1091 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms