RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 SMARCC1Q92922 1105 aaPredicted RBP22.93■■□□□ 1.26
RER1-202ENST00000378512 ZNF831Q5JPB2 1677 aa22.92■■□□□ 1.26
RER1-202ENST00000378512 HSP90AB1P08238 724 aaKnown RBP22.92■■□□□ 1.26
RER1-202ENST00000378512 DCAF5Q96JK2 942 aa22.92■■□□□ 1.26
RER1-202ENST00000378512 TMOD3Q9NYL9 352 aa22.92■■□□□ 1.26
RER1-202ENST00000378512 ZNF530Q6P9A1 599 aaPredicted RBP22.91■■□□□ 1.26
RER1-202ENST00000378512 LINC00116Q8NCU8 138 aa22.91■■□□□ 1.26
RER1-202ENST00000378512 GOLGB1Q14789 3259 aaKnown RBP22.91■■□□□ 1.26
RER1-202ENST00000378512 LOC102724428A0A0B4J2F2 783 aa22.91■■□□□ 1.26
RER1-202ENST00000378512 ERVV-2B6SEH9 535 aa22.91■■□□□ 1.26
RER1-202ENST00000378512 HMOX1P09601 288 aa22.91■■□□□ 1.26
RER1-202ENST00000378512 SIK1P57059 783 aa22.91■■□□□ 1.26
RER1-202ENST00000378512 ITPK1Q13572 414 aa22.91■■□□□ 1.26
RER1-202ENST00000378512 UBR3Q6ZT12 1888 aa22.9■■□□□ 1.26
RER1-202ENST00000378512 PHF14O94880 888 aa22.9■■□□□ 1.26
RER1-202ENST00000378512 ATG3Q9NT62 314 aa22.9■■□□□ 1.26
RER1-202ENST00000378512 AK7Q96M32 723 aa22.89■■□□□ 1.25
RER1-202ENST00000378512 GPR162Q16538 588 aa22.88■■□□□ 1.25
RER1-202ENST00000378512 PELP1Q8IZL8 1130 aaKnown RBP22.88■■□□□ 1.25
RER1-202ENST00000378512 CFAP53Q96M91 514 aa22.87■■□□□ 1.25
RER1-202ENST00000378512 AKAP4Q5JQC9 854 aa22.86■■□□□ 1.25
RER1-202ENST00000378512 C1orf141Q5JVX7 400 aa22.86■■□□□ 1.25
RER1-202ENST00000378512 MRC1P22897 1456 aa22.85■■□□□ 1.25
RER1-202ENST00000378512 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.85■■□□□ 1.25
RER1-202ENST00000378512 ZNF784Q8NCA9 323 aaPredicted RBP22.85■■□□□ 1.25
RER1-202ENST00000378512 SLC4A9Q96Q91 983 aa22.85■■□□□ 1.25
RER1-202ENST00000378512 HMGB2P26583 209 aaKnown RBP22.84■■□□□ 1.25
RER1-202ENST00000378512 ATP6V1AP38606 617 aa22.84■■□□□ 1.25
RER1-202ENST00000378512 DDX10Q13206 875 aaKnown RBP22.84■■□□□ 1.25
RER1-202ENST00000378512 CICQ96RK0 1608 aaPredicted RBP22.84■■□□□ 1.25
RER1-202ENST00000378512 MTHFSDQ2M296 383 aaKnown RBP22.83■■□□□ 1.25
RER1-202ENST00000378512 FLAD1Q8NFF5 587 aa22.83■■□□□ 1.25
RER1-202ENST00000378512 CHD4Q14839 1912 aa22.83■■□□□ 1.25
RER1-202ENST00000378512 U2SURPO15042 1029 aaKnown RBP22.82■■□□□ 1.24
RER1-202ENST00000378512 YBX3P16989 372 aaKnown RBP eCLIP22.82■■□□□ 1.244e-8■■□□□ 13.5
RER1-202ENST00000378512 RSPH6AQ9H0K4 717 aa22.82■■□□□ 1.24
RER1-202ENST00000378512 GNPATO15228 680 aa22.82■■□□□ 1.24
RER1-202ENST00000378512 COL5A3P25940 1745 aaPredicted RBP22.82■■□□□ 1.24
RER1-202ENST00000378512 SIPA1L3O60292 1781 aaPredicted RBP22.8■■□□□ 1.24
RER1-202ENST00000378512 RALBP1Q15311 655 aa22.8■■□□□ 1.24
RER1-202ENST00000378512 RBM42Q9BTD8 480 aaKnown RBP22.8■■□□□ 1.24
RER1-202ENST00000378512 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
RER1-202ENST00000378512 SSFA2P28290 1259 aa22.79■■□□□ 1.24
RER1-202ENST00000378512 CABP4P57796 275 aa22.79■■□□□ 1.24
RER1-202ENST00000378512 NFATC2IPQ8NCF5 419 aa22.78■■□□□ 1.24
RER1-202ENST00000378512 LGR6Q9HBX8 967 aa22.78■■□□□ 1.24
RER1-202ENST00000378512 RNMTO43148 476 aaKnown RBP22.77■■□□□ 1.24
RER1-202ENST00000378512 FCHSD2O94868 740 aa22.77■■□□□ 1.24
RER1-202ENST00000378512 UBR2Q8IWV8 1755 aa22.76■■□□□ 1.23
RER1-202ENST00000378512 PHACTR3Q96KR7 559 aa22.76■■□□□ 1.23
RER1-202ENST00000378512 SLC52A2Q9HAB3 445 aa22.76■■□□□ 1.23
RER1-202ENST00000378512 PRKAR2BP31323 418 aa22.75■■□□□ 1.23
RER1-202ENST00000378512 GAS2L2Q8NHY3 880 aa22.75■■□□□ 1.23
RER1-202ENST00000378512 WWC3Q9ULE0 1092 aa22.75■■□□□ 1.23
RER1-202ENST00000378512 TJP1Q07157 1748 aa22.75■■□□□ 1.23
RER1-202ENST00000378512 CD2APQ9Y5K6 639 aa22.74■■□□□ 1.23
RER1-202ENST00000378512 PTCD1O75127 700 aaKnown RBP22.74■■□□□ 1.23
RER1-202ENST00000378512 U2AF1L5P0DN76 240 aaPredicted RBP22.74■■□□□ 1.23
RER1-202ENST00000378512 U2AF1Q01081 240 aaKnown RBP eCLIP22.74■■□□□ 1.23
RER1-202ENST00000378512 MYH14Q7Z406 1995 aaKnown RBP22.73■■□□□ 1.23
RER1-202ENST00000378512 CEMIPQ8WUJ3 1361 aa22.72■■□□□ 1.23
RER1-202ENST00000378512 DLG5Q8TDM6 1919 aa22.72■■□□□ 1.23
RER1-202ENST00000378512 KCPQ6ZWJ8 1503 aa22.71■■□□□ 1.23
RER1-202ENST00000378512 GNAT3A8MTJ3 354 aa22.71■■□□□ 1.23
RER1-202ENST00000378512 MYBBP1AQ9BQG0 1328 aaKnown RBP22.7■■□□□ 1.23
RER1-202ENST00000378512 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
RER1-202ENST00000378512 ARHGEF1Q92888 912 aaKnown RBP22.7■■□□□ 1.22
RER1-202ENST00000378512 RTCBQ9Y3I0 505 aaKnown RBP22.7■■□□□ 1.22
RER1-202ENST00000378512 MMP10P09238 476 aa22.69■■□□□ 1.22
RER1-202ENST00000378512 CNTNAP4Q9C0A0 1308 aa22.69■■□□□ 1.22
RER1-202ENST00000378512 TRAPPC3LQ5T215 181 aa22.68■■□□□ 1.22
RER1-202ENST00000378512 C4AP0C0L4 1744 aa22.68■■□□□ 1.22
RER1-202ENST00000378512 RC3H1Q5TC82 1133 aaKnown RBP22.67■■□□□ 1.22
RER1-202ENST00000378512 PLEKHF1Q96S99 279 aa22.67■■□□□ 1.22
RER1-202ENST00000378512 PRKRIP1Q9H875 184 aaPredicted RBP22.67■■□□□ 1.22
RER1-202ENST00000378512 GRIN3BO60391 1043 aa22.66■■□□□ 1.22
RER1-202ENST00000378512 RPS6KA4O75676 772 aa22.65■■□□□ 1.22
RER1-202ENST00000378512 GYS1P13807 737 aa22.65■■□□□ 1.22
RER1-202ENST00000378512 CRKLP46109 303 aaKnown RBP22.65■■□□□ 1.22
RER1-202ENST00000378512 KIAA1551Q9HCM1 1747 aa22.64■■□□□ 1.22
RER1-202ENST00000378512 SLC39A6Q13433 755 aa22.64■■□□□ 1.21
RER1-202ENST00000378512 SRP68Q9UHB9 627 aaKnown RBP22.64■■□□□ 1.21
RER1-202ENST00000378512 HTATSF1O43719 755 aaKnown RBP22.63■■□□□ 1.21
RER1-202ENST00000378512 RFC4P35249 363 aa22.62■■□□□ 1.21
RER1-202ENST00000378512 DNAJC10Q8IXB1 793 aa22.62■■□□□ 1.21
RER1-202ENST00000378512 PXDNLA1KZ92 1463 aa22.61■■□□□ 1.21
RER1-202ENST00000378512 N4BP2Q86UW6 1770 aaPredicted RBP22.61■■□□□ 1.21
RER1-202ENST00000378512 ZNF316A6NFI3 1004 aaPredicted RBP22.61■■□□□ 1.21
RER1-202ENST00000378512 ADRA2BP18089 450 aa22.61■■□□□ 1.21
RER1-202ENST00000378512 TEFQ10587 303 aa22.61■■□□□ 1.21
RER1-202ENST00000378512 INTS5Q6P9B9 1019 aaKnown RBP22.61■■□□□ 1.21
RER1-202ENST00000378512 VSIG10Q8N0Z9 540 aa22.61■■□□□ 1.21
RER1-202ENST00000378512 KIF13BQ9NQT8 1826 aa22.61■■□□□ 1.21
RER1-202ENST00000378512 NLGN1Q8N2Q7 840 aa22.6■■□□□ 1.21
RER1-202ENST00000378512 PNNQ9H307 717 aaKnown RBP22.59■■□□□ 1.21
RER1-202ENST00000378512 C10orf71Q711Q0 1435 aa22.59■■□□□ 1.21
RER1-202ENST00000378512 ZNF790Q6PG37 636 aa22.58■■□□□ 1.21
RER1-202ENST00000378512 ATP10DQ9P241 1426 aa22.58■■□□□ 1.2
RER1-202ENST00000378512 A0A0G2JLW4 131 aa22.57■■□□□ 1.2
RER1-202ENST00000378512 C1QTNF8P60827 252 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms