RNA–Protein interactions for RNA: ENST00000378300.9

TPM2-204, Transcript of tropomyosin 2, humanhuman

TSL 3 BASIC

Gene TPM2, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-204ENST00000378300 SLC52A2Q9HAB3 445 aa18.22■□□□□ 0.51
TPM2-204ENST00000378300 KCNQ3O43525 872 aa18.22■□□□□ 0.51
TPM2-204ENST00000378300 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
TPM2-204ENST00000378300 BTBD11A6QL63 1104 aa18.21■□□□□ 0.51
TPM2-204ENST00000378300 BCAR3O75815 825 aa18.21■□□□□ 0.51
TPM2-204ENST00000378300 NEFLP07196 543 aa18.21■□□□□ 0.51
TPM2-204ENST00000378300 QTRT2Q9H974 415 aaKnown RBP18.21■□□□□ 0.51
TPM2-204ENST00000378300 BCL2L13Q9BXK5 485 aa18.2■□□□□ 0.5
TPM2-204ENST00000378300 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
TPM2-204ENST00000378300 MRC1P22897 1456 aa18.2■□□□□ 0.5
TPM2-204ENST00000378300 VAMP4O75379 141 aa18.19■□□□□ 0.5
TPM2-204ENST00000378300 RARSP54136 660 aaKnown RBP18.19■□□□□ 0.5
TPM2-204ENST00000378300 KDM3BQ7LBC6 1761 aa18.19■□□□□ 0.5
TPM2-204ENST00000378300 RNF123Q5XPI4 1314 aa18.19■□□□□ 0.5
TPM2-204ENST00000378300 A0A0G2JS52 829 aa18.19■□□□□ 0.5
TPM2-204ENST00000378300 IRX6P78412 446 aaPredicted RBP18.19■□□□□ 0.5
TPM2-204ENST00000378300 TWISTNBQ3B726 338 aaPredicted RBP18.19■□□□□ 0.5
TPM2-204ENST00000378300 MARCH10Q8NA82 808 aaPredicted RBP18.19■□□□□ 0.5
TPM2-204ENST00000378300 BABAM1Q9NWV8 329 aa18.19■□□□□ 0.5
TPM2-204ENST00000378300 PLIN1O60240 522 aa18.18■□□□□ 0.5
TPM2-204ENST00000378300 CABP4P57796 275 aa18.18■□□□□ 0.5
TPM2-204ENST00000378300 SLC39A6Q13433 755 aa18.18■□□□□ 0.5
TPM2-204ENST00000378300 THSD7AQ9UPZ6 1657 aa18.17■□□□□ 0.5
TPM2-204ENST00000378300 ERVV-2B6SEH9 535 aa18.17■□□□□ 0.5
TPM2-204ENST00000378300 CT47B1P0C2W7 299 aaPredicted RBP18.17■□□□□ 0.5
TPM2-204ENST00000378300 FKBP8Q14318 412 aa18.17■□□□□ 0.5
TPM2-204ENST00000378300 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
TPM2-204ENST00000378300 EIF4A1P60842 406 aaKnown RBP18.16■□□□□ 0.5
TPM2-204ENST00000378300 TCERG1O14776 1098 aaKnown RBP18.15■□□□□ 0.5
TPM2-204ENST00000378300 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
TPM2-204ENST00000378300 ONECUT3O60422 494 aaPredicted RBP18.14■□□□□ 0.49
TPM2-204ENST00000378300 ZNF790Q6PG37 636 aa18.14■□□□□ 0.49
TPM2-204ENST00000378300 ITGB4P16144 1822 aa18.13■□□□□ 0.49
TPM2-204ENST00000378300 FAM182BQ5T319 152 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 ZNF772Q68DY9 489 aaPredicted RBP18.12■□□□□ 0.49
TPM2-204ENST00000378300 SEPT12Q8IYM1 358 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 PIGBQ92521 554 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 SMC4Q9NTJ3 1288 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 DOT1LQ8TEK3 1739 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 KAT6BQ8WYB5 2073 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 ACSBG1Q96GR2 724 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
TPM2-204ENST00000378300 PRAMEF22A3QJZ6 481 aa18.11■□□□□ 0.49
TPM2-204ENST00000378300 PRIM1P49642 420 aaKnown RBP18.11■□□□□ 0.49
TPM2-204ENST00000378300 FRAT1Q92837 279 aaPredicted RBP18.11■□□□□ 0.49
TPM2-204ENST00000378300 SYTL4Q96C24 671 aaPredicted RBP18.11■□□□□ 0.49
TPM2-204ENST00000378300 RGS17Q9UGC6 210 aaPredicted RBP18.11■□□□□ 0.49
TPM2-204ENST00000378300 HEG1Q9ULI3 1381 aa18.1■□□□□ 0.49
TPM2-204ENST00000378300 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
TPM2-204ENST00000378300 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
TPM2-204ENST00000378300 NECTIN2Q92692 538 aa18.1■□□□□ 0.49
TPM2-204ENST00000378300 ZNF496Q96IT1 587 aaPredicted RBP18.1■□□□□ 0.49
TPM2-204ENST00000378300 ZNF428Q96B54 188 aa18.09■□□□□ 0.49
TPM2-204ENST00000378300 BCL9O00512 1426 aa18.09■□□□□ 0.49
TPM2-204ENST00000378300 GIGYF1O75420 1035 aaPredicted RBP18.09■□□□□ 0.49
TPM2-204ENST00000378300 TTC5Q8N0Z6 440 aa18.09■□□□□ 0.49
TPM2-204ENST00000378300 MRPL50Q8N5N7 158 aaKnown RBP18.09■□□□□ 0.49
TPM2-204ENST00000378300 ASAP1Q9ULH1 1129 aa18.09■□□□□ 0.49
TPM2-204ENST00000378300 TNNQ9UQP3 1299 aa18.09■□□□□ 0.49
TPM2-204ENST00000378300 PAPPAQ13219 1627 aa18.09■□□□□ 0.49
TPM2-204ENST00000378300 KCNQ2O43526 872 aa18.07■□□□□ 0.48
TPM2-204ENST00000378300 RBM6P78332 1123 aaKnown RBP18.07■□□□□ 0.48
TPM2-204ENST00000378300 ANP32EQ9BTT0 268 aa18.07■□□□□ 0.48
TPM2-204ENST00000378300 NOB1Q9ULX3 412 aaKnown RBP18.07■□□□□ 0.48
TPM2-204ENST00000378300 UBR2Q8IWV8 1755 aa18.06■□□□□ 0.48
TPM2-204ENST00000378300 C5P01031 1676 aa18.06■□□□□ 0.48
TPM2-204ENST00000378300 KCPQ6ZWJ8 1503 aa18.06■□□□□ 0.48
TPM2-204ENST00000378300 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
TPM2-204ENST00000378300 EIF2S2P20042 333 aaKnown RBP18.06■□□□□ 0.48
TPM2-204ENST00000378300 ATG3Q9NT62 314 aa18.06■□□□□ 0.48
TPM2-204ENST00000378300 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
TPM2-204ENST00000378300 POTEAQ6S8J7 498 aa18.05■□□□□ 0.48
TPM2-204ENST00000378300 PTF1AQ7RTS3 328 aa18.05■□□□□ 0.48
TPM2-204ENST00000378300 FMNL2Q96PY5 1086 aa18.05■□□□□ 0.48
TPM2-204ENST00000378300 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
TPM2-204ENST00000378300 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
TPM2-204ENST00000378300 HOXB7P09629 217 aa18.04■□□□□ 0.48
TPM2-204ENST00000378300 CANXP27824 592 aaKnown RBP18.04■□□□□ 0.48
TPM2-204ENST00000378300 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.04■□□□□ 0.48
TPM2-204ENST00000378300 SOS1Q07889 1333 aaPredicted RBP18.04■□□□□ 0.48
TPM2-204ENST00000378300 BRPF1P55201 1214 aaPredicted RBP18.04■□□□□ 0.48
TPM2-204ENST00000378300 USP16Q9Y5T5 823 aa18.04■□□□□ 0.48
TPM2-204ENST00000378300 CCDC30Q5VVM6 783 aa18.03■□□□□ 0.48
TPM2-204ENST00000378300 CLUAP1Q96AJ1 413 aa18.03■□□□□ 0.48
TPM2-204ENST00000378300 KIF16BQ96L93 1317 aa18.03■□□□□ 0.48
TPM2-204ENST00000378300 RLBP1P12271 317 aa18.02■□□□□ 0.48
TPM2-204ENST00000378300 TRIM27P14373 513 aa18.02■□□□□ 0.48
TPM2-204ENST00000378300 ZKSCAN2Q63HK3 967 aa18.02■□□□□ 0.48
TPM2-204ENST00000378300 G2E3Q7L622 706 aa18.02■□□□□ 0.48
TPM2-204ENST00000378300 ILDR1Q86SU0 546 aaPredicted RBP18.02■□□□□ 0.48
TPM2-204ENST00000378300 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
TPM2-204ENST00000378300 ANXA1P04083 346 aa18.02■□□□□ 0.47
TPM2-204ENST00000378300 SNRPA1P09661 255 aaKnown RBP18.02■□□□□ 0.47
TPM2-204ENST00000378300 RXRBP28702 533 aa18.02■□□□□ 0.47
TPM2-204ENST00000378300 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.47
TPM2-204ENST00000378300 KRT27Q7Z3Y8 459 aa18.01■□□□□ 0.47
TPM2-204ENST00000378300 STK31Q9BXU1 1019 aa18.01■□□□□ 0.47
TPM2-204ENST00000378300 ERICH6BQ5W0A0 696 aa18■□□□□ 0.47
TPM2-204ENST00000378300 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
TPM2-204ENST00000378300 EXOC6Q8TAG9 804 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms