RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 SBNO1A3KN83 1393 aa16.94■□□□□ 0.3
SF1-205ENST00000377394 FLT4P35916 1363 aa16.94■□□□□ 0.3
SF1-205ENST00000377394 FMN2Q9NZ56 1722 aa16.94■□□□□ 0.3
SF1-205ENST00000377394 HMMRO75330 724 aa16.94■□□□□ 0.3
SF1-205ENST00000377394 CCT4P50991 539 aaKnown RBP16.94■□□□□ 0.3
SF1-205ENST00000377394 CASC1Q6TDU7 716 aa16.94■□□□□ 0.3
SF1-205ENST00000377394 RTF1Q92541 710 aaKnown RBP16.94■□□□□ 0.3
SF1-205ENST00000377394 OSBPL3Q9H4L5 887 aa16.94■□□□□ 0.3
SF1-205ENST00000377394 ZBTB7CA1YPR0 619 aa16.93■□□□□ 0.3
SF1-205ENST00000377394 CYP2E1P05181 493 aaPredicted RBP16.93■□□□□ 0.3
SF1-205ENST00000377394 NCLP19338 710 aaKnown RBP16.93■□□□□ 0.3
SF1-205ENST00000377394 SLC26A8Q96RN1 970 aa16.93■□□□□ 0.3
SF1-205ENST00000377394 NOL7Q9UMY1 257 aaKnown RBP16.93■□□□□ 0.3
SF1-205ENST00000377394 SLC4A10Q6U841 1118 aa16.93■□□□□ 0.3
SF1-205ENST00000377394 JARID2Q92833 1246 aaPredicted RBP16.93■□□□□ 0.3
SF1-205ENST00000377394 RBSNQ9H1K0 784 aa16.93■□□□□ 0.3
SF1-205ENST00000377394 CEP170BQ9Y4F5 1589 aaPredicted RBP16.93■□□□□ 0.3
SF1-205ENST00000377394 IGSF1Q8N6C5 1336 aa16.92■□□□□ 0.3
SF1-205ENST00000377394 FGD1P98174 961 aa16.92■□□□□ 0.3
SF1-205ENST00000377394 EYA1Q99502 592 aa16.92■□□□□ 0.3
SF1-205ENST00000377394 ZNF500O60304 480 aaPredicted RBP16.92■□□□□ 0.3
SF1-205ENST00000377394 PDE1AP54750 535 aa16.91■□□□□ 0.3
SF1-205ENST00000377394 KLHL40Q2TBA0 621 aa16.91■□□□□ 0.3
SF1-205ENST00000377394 CAVIN1Q6NZI2 390 aaKnown RBP16.91■□□□□ 0.3
SF1-205ENST00000377394 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
SF1-205ENST00000377394 GOLGA6L22H0YM25 854 aa16.91■□□□□ 0.3
SF1-205ENST00000377394 REC8O95072 547 aa16.91■□□□□ 0.3
SF1-205ENST00000377394 NUCB2P80303 420 aa16.91■□□□□ 0.3
SF1-205ENST00000377394 ERC2O15083 957 aa16.9■□□□□ 0.3
SF1-205ENST00000377394 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
SF1-205ENST00000377394 SALL3Q9BXA9 1300 aa16.9■□□□□ 0.3
SF1-205ENST00000377394 GNAI2P04899 355 aa16.9■□□□□ 0.3
SF1-205ENST00000377394 AK9Q5TCS8 1911 aa16.89■□□□□ 0.29
SF1-205ENST00000377394 DYNC1I1O14576 645 aa16.89■□□□□ 0.29
SF1-205ENST00000377394 ST18O60284 1047 aa16.89■□□□□ 0.29
SF1-205ENST00000377394 PKP1Q13835 747 aa16.89■□□□□ 0.29
SF1-205ENST00000377394 AMPHP49418 695 aa16.88■□□□□ 0.29
SF1-205ENST00000377394 ZSCAN23Q3MJ62 389 aa16.88■□□□□ 0.29
SF1-205ENST00000377394 MCTP1Q6DN14 999 aa16.88■□□□□ 0.29
SF1-205ENST00000377394 CWC22Q9HCG8 908 aaKnown RBP16.88■□□□□ 0.29
SF1-205ENST00000377394 LRRC37A3O60309 1634 aa16.88■□□□□ 0.29
SF1-205ENST00000377394 IBTKQ9P2D0 1353 aaPredicted RBP16.88■□□□□ 0.29
SF1-205ENST00000377394 HTATSF1O43719 755 aaKnown RBP16.88■□□□□ 0.29
SF1-205ENST00000377394 TSC1Q92574 1164 aa16.88■□□□□ 0.29
SF1-205ENST00000377394 EXOC6BQ9Y2D4 811 aa16.88■□□□□ 0.29
SF1-205ENST00000377394 PRIM1P49642 420 aaKnown RBP16.87■□□□□ 0.29
SF1-205ENST00000377394 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
SF1-205ENST00000377394 PDLIM2Q96JY6 352 aa16.87■□□□□ 0.29
SF1-205ENST00000377394 PIK3C2AO00443 1686 aa16.87■□□□□ 0.29
SF1-205ENST00000377394 FLIIQ13045 1269 aa16.87■□□□□ 0.29
SF1-205ENST00000377394 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
SF1-205ENST00000377394 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
SF1-205ENST00000377394 ZKSCAN5Q9Y2L8 839 aa16.87■□□□□ 0.29
SF1-205ENST00000377394 DIP2AQ14689 1571 aa16.86■□□□□ 0.29
SF1-205ENST00000377394 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
SF1-205ENST00000377394 ZNF445P59923 1031 aa16.86■□□□□ 0.29
SF1-205ENST00000377394 HS1BP3Q53T59 392 aa16.86■□□□□ 0.29
SF1-205ENST00000377394 LMBRD1Q9NUN5 540 aa16.86■□□□□ 0.29
SF1-205ENST00000377394 RBM27Q9P2N5 1060 aaKnown RBP16.86■□□□□ 0.29
SF1-205ENST00000377394 CEBPAP49715 358 aaPredicted RBP16.86■□□□□ 0.29
SF1-205ENST00000377394 DMTNQ08495 405 aa16.86■□□□□ 0.29
SF1-205ENST00000377394 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
SF1-205ENST00000377394 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 CCDC30Q5VVM6 783 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 TSHZ3Q63HK5 1081 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 ZDHHC9Q9Y397 364 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
SF1-205ENST00000377394 XRN1Q8IZH2 1706 aaKnown RBP16.85■□□□□ 0.29
SF1-205ENST00000377394 RGPD8O14715 1765 aaPredicted RBP16.85■□□□□ 0.29
SF1-205ENST00000377394 ATP8B2P98198 1209 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 TUBGCP6Q96RT7 1819 aa16.85■□□□□ 0.29
SF1-205ENST00000377394 NWD1Q149M9 1564 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 ARHGAP23Q9P227 1491 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 GNAT3A8MTJ3 354 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 GNAI3P08754 354 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 LRRCC1Q9C099 1032 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 SLIT1O75093 1534 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 FKBP5Q13451 457 aaPredicted RBP16.84■□□□□ 0.29
SF1-205ENST00000377394 SASS6Q6UVJ0 657 aa16.84■□□□□ 0.29
SF1-205ENST00000377394 CCDC94Q9BW85 323 aaPredicted RBP16.84■□□□□ 0.29
SF1-205ENST00000377394 ESYT1Q9BSJ8 1104 aa16.83■□□□□ 0.29
SF1-205ENST00000377394 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
SF1-205ENST00000377394 IL17REQ8NFR9 667 aa16.83■□□□□ 0.28
SF1-205ENST00000377394 CHAMP1Q96JM3 812 aa16.83■□□□□ 0.28
SF1-205ENST00000377394 MX1P20591 662 aa16.83■□□□□ 0.28
SF1-205ENST00000377394 HOXC9P31274 260 aa16.83■□□□□ 0.28
SF1-205ENST00000377394 NLRP6P59044 892 aa16.83■□□□□ 0.28
SF1-205ENST00000377394 NECTIN2Q92692 538 aa16.82■□□□□ 0.28
SF1-205ENST00000377394 STAP2Q9UGK3 403 aa16.82■□□□□ 0.28
SF1-205ENST00000377394 SOS1Q07889 1333 aaPredicted RBP16.81■□□□□ 0.28
SF1-205ENST00000377394 MARF1Q9Y4F3 1742 aaKnown RBP16.81■□□□□ 0.28
SF1-205ENST00000377394 CBX1P83916 185 aa16.81■□□□□ 0.28
SF1-205ENST00000377394 CSPP1Q1MSJ5 1256 aa16.81■□□□□ 0.28
SF1-205ENST00000377394 LRRFIP2Q9Y608 721 aaKnown RBP16.81■□□□□ 0.28
SF1-205ENST00000377394 MAP3K5Q99683 1374 aa16.81■□□□□ 0.28
SF1-205ENST00000377394 FAM177BA6PVY3 158 aa16.8■□□□□ 0.28
SF1-205ENST00000377394 CHMLP26374 656 aa16.8■□□□□ 0.28
SF1-205ENST00000377394 NEK4P51957 841 aa16.8■□□□□ 0.28
SF1-205ENST00000377394 MPNDQ8N594 471 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms