RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 RAB11FIP4Q86YS3 637 aa14.18□□□□□ -0.14
DDR1-227ENST00000376570 RPAP2Q8IXW5 612 aaPredicted RBP14.18□□□□□ -0.14
DDR1-227ENST00000376570 TTC22Q5TAA0 569 aa14.18□□□□□ -0.14
DDR1-227ENST00000376570 PPRC1Q5VV67 1664 aaKnown RBP14.18□□□□□ -0.14
DDR1-227ENST00000376570 SPHKAPQ2M3C7 1700 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 CABP4P57796 275 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 MAP3K4Q9Y6R4 1608 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 SBNO2Q9Y2G9 1366 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 SHROOM2Q13796 1616 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 BMP2KLQ5H9B9 411 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 SNRKQ9NRH2 765 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 ANKRD44Q8N8A2 993 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 DNAAF4Q8WXU2 420 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 KIF1BO60333 1816 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 NINLQ9Y2I6 1382 aa14.17□□□□□ -0.14
DDR1-227ENST00000376570 MLH3Q9UHC1 1453 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 CHL1O00533 1208 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 TATP17735 454 aaPredicted RBP14.16□□□□□ -0.14
DDR1-227ENST00000376570 PROSER3Q2NL68 480 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 FAM43AQ8N2R8 423 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 TMEM2Q9UHN6 1383 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 DDX11L8A8MPP1 907 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 TULP1O00294 542 aaPredicted RBP14.16□□□□□ -0.14
DDR1-227ENST00000376570 GPTP24298 496 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 PDE1AP54750 535 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 UBE3BQ7Z3V4 1068 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 EDC3Q96F86 508 aaKnown RBP14.16□□□□□ -0.14
DDR1-227ENST00000376570 LRRC2Q9BYS8 371 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 IL16Q14005 1332 aa14.16□□□□□ -0.14
DDR1-227ENST00000376570 PRPF40BQ6NWY9 871 aaKnown RBP14.16□□□□□ -0.14
DDR1-227ENST00000376570 ADAMTS2O95450 1211 aa14.15□□□□□ -0.14
DDR1-227ENST00000376570 TET3O43151 1660 aa14.15□□□□□ -0.14
DDR1-227ENST00000376570 MSNP26038 577 aaKnown RBP14.15□□□□□ -0.14
DDR1-227ENST00000376570 HSP90AB3PQ58FF7 597 aa14.15□□□□□ -0.14
DDR1-227ENST00000376570 RRAGDQ9NQL2 400 aaPredicted RBP14.15□□□□□ -0.14
DDR1-227ENST00000376570 UNC5CLQ8IV45 518 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 GPATCH3Q96I76 525 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 PIP4K2BP78356 416 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 COPS6Q7L5N1 327 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 TULP4Q9NRJ4 1543 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 APPP05067 770 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 AAMPQ13685 434 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 DDX11Q96FC9 970 aa14.14□□□□□ -0.15
DDR1-227ENST00000376570 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
DDR1-227ENST00000376570 DDX58O95786 925 aaKnown RBP14.13□□□□□ -0.15
DDR1-227ENST00000376570 NECAB1Q8N987 351 aa14.13□□□□□ -0.15
DDR1-227ENST00000376570 DCTPP1Q9H773 170 aa14.13□□□□□ -0.15
DDR1-227ENST00000376570 MYOM2P54296 1465 aa14.13□□□□□ -0.15
DDR1-227ENST00000376570 RBM10P98175 930 aaKnown RBP14.13□□□□□ -0.15
DDR1-227ENST00000376570 FKBP4Q02790 459 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDR1-227ENST00000376570 WASHC4Q2M389 1173 aa14.13□□□□□ -0.15
DDR1-227ENST00000376570 CCDC83Q8IWF9 413 aa14.13□□□□□ -0.15
DDR1-227ENST00000376570 XAGE3Q8WTP9 111 aa14.13□□□□□ -0.15
DDR1-227ENST00000376570 CASTP20810 708 aaKnown RBP14.12□□□□□ -0.15
DDR1-227ENST00000376570 XRCC6P12956 609 aaKnown RBP eCLIP14.12□□□□□ -0.15
DDR1-227ENST00000376570 RABEP1Q15276 862 aa14.12□□□□□ -0.15
DDR1-227ENST00000376570 HECW2Q9P2P5 1572 aa14.12□□□□□ -0.15
DDR1-227ENST00000376570 KIDINS220Q9ULH0 1771 aa14.12□□□□□ -0.15
DDR1-227ENST00000376570 SMC3Q9UQE7 1217 aa14.12□□□□□ -0.15
DDR1-227ENST00000376570 MTMR7Q9Y216 660 aa14.11□□□□□ -0.15
DDR1-227ENST00000376570 EDC4Q6P2E9 1401 aaKnown RBP14.11□□□□□ -0.15
DDR1-227ENST00000376570 SYCE3A1L190 88 aa14.11□□□□□ -0.15
DDR1-227ENST00000376570 DRC7Q8IY82 874 aa14.11□□□□□ -0.15
DDR1-227ENST00000376570 FAM13BQ9NYF5 915 aa14.11□□□□□ -0.15
DDR1-227ENST00000376570 FLT4P35916 1363 aa14.11□□□□□ -0.15
DDR1-227ENST00000376570 RHPN1Q8TCX5 695 aa14.11□□□□□ -0.15
DDR1-227ENST00000376570 CNTROBQ8N137 903 aa14.1□□□□□ -0.15
DDR1-227ENST00000376570 PALD1Q9ULE6 856 aa14.1□□□□□ -0.15
DDR1-227ENST00000376570 GLI2P10070 1586 aa14.1□□□□□ -0.15
DDR1-227ENST00000376570 A0A087WZG4 1122 aa14.1□□□□□ -0.15
DDR1-227ENST00000376570 GTF2E1P29083 439 aaPredicted RBP14.1□□□□□ -0.15
DDR1-227ENST00000376570 GUCY1B3Q02153 619 aa14.1□□□□□ -0.15
DDR1-227ENST00000376570 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
DDR1-227ENST00000376570 NEO1Q92859 1461 aa14.1□□□□□ -0.15
DDR1-227ENST00000376570 DDX46Q7L014 1031 aaKnown RBP14.09□□□□□ -0.15
DDR1-227ENST00000376570 BICDL1Q6ZP65 573 aa14.09□□□□□ -0.15
DDR1-227ENST00000376570 ZKSCAN1P17029 563 aaPredicted RBP14.08□□□□□ -0.15
DDR1-227ENST00000376570 TBX22Q9Y458 520 aa14.08□□□□□ -0.15
DDR1-227ENST00000376570 NASPP49321 788 aaPredicted RBP14.08□□□□□ -0.16
DDR1-227ENST00000376570 FAM173BQ6P4H8 233 aa14.08□□□□□ -0.16
DDR1-227ENST00000376570 CHST3Q7LGC8 479 aa14.08□□□□□ -0.16
DDR1-227ENST00000376570 GRPEL1Q9HAV7 217 aa14.08□□□□□ -0.16
DDR1-227ENST00000376570 AXIN2Q9Y2T1 843 aa14.08□□□□□ -0.16
DDR1-227ENST00000376570 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
DDR1-227ENST00000376570 PUS7Q96PZ0 661 aaKnown RBP14.08□□□□□ -0.16
DDR1-227ENST00000376570 USP44Q9H0E7 712 aa14.07□□□□□ -0.16
DDR1-227ENST00000376570 TFIP11Q9UBB9 837 aaKnown RBP14.07□□□□□ -0.16
DDR1-227ENST00000376570 A2ML1A8K2U0 1454 aa14.07□□□□□ -0.16
DDR1-227ENST00000376570 ATP2B1P20020 1258 aa14.07□□□□□ -0.16
DDR1-227ENST00000376570 DBF4Q9UBU7 674 aaPredicted RBP14.07□□□□□ -0.16
DDR1-227ENST00000376570 USP16Q9Y5T5 823 aa14.07□□□□□ -0.16
DDR1-227ENST00000376570 PLEKHG3A1L390 1219 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 H3BQV1 296 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 HAND2P61296 217 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 IFFO2Q5TF58 517 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 BAG4O95429 457 aaKnown RBP14.06□□□□□ -0.16
DDR1-227ENST00000376570 CAMK4Q16566 473 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 ISY1Q9ULR0 285 aaKnown RBP14.06□□□□□ -0.16
DDR1-227ENST00000376570 MROH2AA6NES4 1674 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms