RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 DNAAF4Q8WXU2 420 aa16.74■□□□□ 0.27
DDR1-225ENST00000376568 TFCP2L1Q9NZI6 479 aa16.74■□□□□ 0.27
DDR1-225ENST00000376568 ZFYVE9O95405 1425 aa16.74■□□□□ 0.27
DDR1-225ENST00000376568 ARHGEF10O15013 1369 aa16.73■□□□□ 0.27
DDR1-225ENST00000376568 KCNQ2O43526 872 aa16.73■□□□□ 0.27
DDR1-225ENST00000376568 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
DDR1-225ENST00000376568 LMTK2Q8IWU2 1503 aa16.73■□□□□ 0.27
DDR1-225ENST00000376568 FAM135BQ49AJ0 1406 aa16.72■□□□□ 0.27
DDR1-225ENST00000376568 ANKRD13DQ6ZTN6 518 aa16.72■□□□□ 0.27
DDR1-225ENST00000376568 KIAA1211Q6ZU35 1233 aa16.72■□□□□ 0.27
DDR1-225ENST00000376568 GNPATO15228 680 aa16.72■□□□□ 0.27
DDR1-225ENST00000376568 FOXD4L5Q5VV16 416 aaPredicted RBP16.72■□□□□ 0.27
DDR1-225ENST00000376568 CENPQQ7L2Z9 268 aaPredicted RBP16.72■□□□□ 0.27
DDR1-225ENST00000376568 FOXD4L4Q8WXT5 416 aaPredicted RBP16.72■□□□□ 0.27
DDR1-225ENST00000376568 IQSEC3Q9UPP2 1182 aaPredicted RBP16.72■□□□□ 0.27
DDR1-225ENST00000376568 GNAI3P08754 354 aa16.71■□□□□ 0.27
DDR1-225ENST00000376568 MSL1Q68DK7 614 aa16.71■□□□□ 0.27
DDR1-225ENST00000376568 TULP1O00294 542 aaPredicted RBP16.71■□□□□ 0.27
DDR1-225ENST00000376568 MAP3K5Q99683 1374 aa16.71■□□□□ 0.27
DDR1-225ENST00000376568 APBA3O96018 575 aa16.71■□□□□ 0.27
DDR1-225ENST00000376568 APPP05067 770 aa16.71■□□□□ 0.27
DDR1-225ENST00000376568 FOXD4L6Q3SYB3 417 aaPredicted RBP16.71■□□□□ 0.27
DDR1-225ENST00000376568 FOXD4L3Q6VB84 417 aaPredicted RBP16.71■□□□□ 0.27
DDR1-225ENST00000376568 RAD21O60216 631 aa16.71■□□□□ 0.26
DDR1-225ENST00000376568 KLHDC4Q8TBB5 520 aa16.71■□□□□ 0.26
DDR1-225ENST00000376568 C1orf167Q5SNV9 1468 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 RFC4P35249 363 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 AFF2P51816 1311 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 PHKG2P15735 406 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
DDR1-225ENST00000376568 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
DDR1-225ENST00000376568 PA2G4Q9UQ80 394 aaKnown RBP16.7■□□□□ 0.26
DDR1-225ENST00000376568 PROSER3Q2NL68 480 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 HELBQ8NG08 1087 aaPredicted RBP16.7■□□□□ 0.26
DDR1-225ENST00000376568 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 MTMR7Q9Y216 660 aa16.7■□□□□ 0.26
DDR1-225ENST00000376568 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 CEP170BQ9Y4F5 1589 aaPredicted RBP16.69■□□□□ 0.26
DDR1-225ENST00000376568 CYP27B1O15528 508 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 KDM4AO75164 1064 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 CCDC27Q2M243 656 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 FAM89AQ96GI7 184 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 MROH1Q8NDA8 1641 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 ZMYM4Q5VZL5 1548 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 CCNL1Q9UK58 526 aaPredicted RBP16.69■□□□□ 0.26
DDR1-225ENST00000376568 KIF13AQ9H1H9 1805 aa16.69■□□□□ 0.26
DDR1-225ENST00000376568 PCDHB15Q9Y5E8 787 aa16.68■□□□□ 0.26
DDR1-225ENST00000376568 PIK3R4Q99570 1358 aa16.68■□□□□ 0.26
DDR1-225ENST00000376568 IGHDP01880 384 aa16.68■□□□□ 0.26
DDR1-225ENST00000376568 PDE3AQ14432 1141 aa16.68■□□□□ 0.26
DDR1-225ENST00000376568 PDE4AP27815 886 aa16.68■□□□□ 0.26
DDR1-225ENST00000376568 FKBP4Q02790 459 aaKnown RBP eCLIP16.68■□□□□ 0.26
DDR1-225ENST00000376568 SEPT12Q8IYM1 358 aa16.68■□□□□ 0.26
DDR1-225ENST00000376568 TRPM1Q7Z4N2 1603 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 PCDH11XQ9BZA7 1347 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 PCDH11YQ9BZA8 1340 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 TSHZ2Q9NRE2 1034 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 HDAC5Q9UQL6 1122 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 JAG2Q9Y219 1238 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 CLASRPQ8N2M8 674 aaKnown RBP16.67■□□□□ 0.26
DDR1-225ENST00000376568 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDR1-225ENST00000376568 CCT4P50991 539 aaKnown RBP16.67■□□□□ 0.26
DDR1-225ENST00000376568 TULP4Q9NRJ4 1543 aa16.67■□□□□ 0.26
DDR1-225ENST00000376568 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
DDR1-225ENST00000376568 PLEKHF1Q96S99 279 aa16.66■□□□□ 0.26
DDR1-225ENST00000376568 NKTRP30414 1462 aaKnown RBP16.66■□□□□ 0.26
DDR1-225ENST00000376568 HCLS1P14317 486 aaPredicted RBP16.66■□□□□ 0.26
DDR1-225ENST00000376568 DZIP3Q86Y13 1208 aaKnown RBP16.66■□□□□ 0.26
DDR1-225ENST00000376568 GPATCH3Q96I76 525 aa16.66■□□□□ 0.26
DDR1-225ENST00000376568 FER1L4A9Z1Z3 1794 aa16.66■□□□□ 0.26
DDR1-225ENST00000376568 INSRP06213 1382 aa16.65■□□□□ 0.26
DDR1-225ENST00000376568 WDR17Q8IZU2 1322 aa16.65■□□□□ 0.26
DDR1-225ENST00000376568 TTLL7Q6ZT98 887 aa16.65■□□□□ 0.26
DDR1-225ENST00000376568 AACSQ86V21 672 aa16.65■□□□□ 0.26
DDR1-225ENST00000376568 KDM5AP29375 1690 aaKnown RBP16.64■□□□□ 0.25
DDR1-225ENST00000376568 CHAF1AQ13111 956 aaPredicted RBP16.64■□□□□ 0.25
DDR1-225ENST00000376568 MRPL50Q8N5N7 158 aaKnown RBP16.64■□□□□ 0.25
DDR1-225ENST00000376568 MROH2AA6NES4 1674 aa16.64■□□□□ 0.25
DDR1-225ENST00000376568 CHL1O00533 1208 aa16.64■□□□□ 0.25
DDR1-225ENST00000376568 NCLP19338 710 aaKnown RBP16.64■□□□□ 0.25
DDR1-225ENST00000376568 C16orf71Q8IYS4 520 aaPredicted RBP16.64■□□□□ 0.25
DDR1-225ENST00000376568 DIAPH3Q9NSV4 1193 aa16.64■□□□□ 0.25
DDR1-225ENST00000376568 PPP1R42Q7Z4L9 355 aa16.63■□□□□ 0.25
DDR1-225ENST00000376568 ZNF622Q969S3 477 aaKnown RBP eCLIP16.63■□□□□ 0.25
DDR1-225ENST00000376568 CPS1P31327 1500 aa16.63■□□□□ 0.25
DDR1-225ENST00000376568 HYPKQ9NX55 129 aa16.63■□□□□ 0.25
DDR1-225ENST00000376568 ABCF2Q9UG63 623 aa16.63■□□□□ 0.25
DDR1-225ENST00000376568 SLC4A8Q2Y0W8 1093 aa16.62■□□□□ 0.25
DDR1-225ENST00000376568 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
DDR1-225ENST00000376568 NBPF5PQ86XG9 351 aaPredicted RBP16.62■□□□□ 0.25
DDR1-225ENST00000376568 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
DDR1-225ENST00000376568 BOLA2Q9H3K6 86 aa16.62■□□□□ 0.25
DDR1-225ENST00000376568 USP19O94966 1318 aa16.62■□□□□ 0.25
DDR1-225ENST00000376568 CARD10Q9BWT7 1032 aa16.62■□□□□ 0.25
DDR1-225ENST00000376568 EIF4A1P60842 406 aaKnown RBP16.61■□□□□ 0.25
DDR1-225ENST00000376568 PIGBQ92521 554 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms