RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 NUTM2FA1L443 756 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 REC8O95072 547 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 NUCB2P80303 420 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 KLHL40Q2TBA0 621 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 EID1Q9Y6B2 187 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 ERC2O15083 957 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 GNAI2P04899 355 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 FOXD4L1Q9NU39 408 aa13.14□□□□□ -0.31
ABCF1-202ENST00000376545 F6X3S4 739 aa13.13□□□□□ -0.31
ABCF1-202ENST00000376545 FER1L4A9Z1Z3 1794 aa13.13□□□□□ -0.31
ABCF1-202ENST00000376545 CLCN1P35523 988 aa13.13□□□□□ -0.31
ABCF1-202ENST00000376545 LTN1O94822 1766 aa13.13□□□□□ -0.31
ABCF1-202ENST00000376545 KDM3BQ7LBC6 1761 aa13.13□□□□□ -0.31
ABCF1-202ENST00000376545 PHRF1Q9P1Y6 1649 aaKnown RBP13.13□□□□□ -0.31
ABCF1-202ENST00000376545 GNAT3A8MTJ3 354 aa13.12□□□□□ -0.31
ABCF1-202ENST00000376545 HOXC9P31274 260 aa13.12□□□□□ -0.31
ABCF1-202ENST00000376545 ATP8B2P98198 1209 aa13.12□□□□□ -0.31
ABCF1-202ENST00000376545 FLIIQ13045 1269 aa13.12□□□□□ -0.31
ABCF1-202ENST00000376545 CCDC30Q5VVM6 783 aa13.12□□□□□ -0.31
ABCF1-202ENST00000376545 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
ABCF1-202ENST00000376545 GNAI3P08754 354 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 GOLGA6L22H0YM25 854 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 ST18O60284 1047 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 AMPHP49418 695 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
ABCF1-202ENST00000376545 IL17REQ8NFR9 667 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
ABCF1-202ENST00000376545 CRYBG1Q9Y4K1 1723 aa13.1□□□□□ -0.31
ABCF1-202ENST00000376545 ADAMTSL3P82987 1691 aa13.1□□□□□ -0.31
ABCF1-202ENST00000376545 AOX1Q06278 1338 aa13.1□□□□□ -0.31
ABCF1-202ENST00000376545 SLC4A10Q6U841 1118 aa13.1□□□□□ -0.31
ABCF1-202ENST00000376545 LMBRD1Q9NUN5 540 aa13.1□□□□□ -0.31
ABCF1-202ENST00000376545 CEMIPQ8WUJ3 1361 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 LMO7Q8WWI1 1683 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 EPB41L2O43491 1005 aaKnown RBP13.09□□□□□ -0.31
ABCF1-202ENST00000376545 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
ABCF1-202ENST00000376545 ZNF445P59923 1031 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 LRRCC1Q9C099 1032 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 SOX12O15370 315 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 ESYT1Q9BSJ8 1104 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 CHD2O14647 1828 aaKnown RBP13.09□□□□□ -0.31
ABCF1-202ENST00000376545 NFAT5O94916 1531 aa13.09□□□□□ -0.31
ABCF1-202ENST00000376545 ARXQ96QS3 562 aa13.08□□□□□ -0.31
ABCF1-202ENST00000376545 APBB1O00213 710 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 ANAPC15P60006 121 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
ABCF1-202ENST00000376545 PPP1R9BQ96SB3 815 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 SRCIN1Q9C0H9 1055 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 MX1P20591 662 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 PKP1Q13835 747 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 USP44Q9H0E7 712 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 EXOC6BQ9Y2D4 811 aa13.08□□□□□ -0.32
ABCF1-202ENST00000376545 NLRP6P59044 892 aa13.07□□□□□ -0.32
ABCF1-202ENST00000376545 CUL4AQ13619 759 aa13.07□□□□□ -0.32
ABCF1-202ENST00000376545 THEMISQ8N1K5 641 aaPredicted RBP13.07□□□□□ -0.32
ABCF1-202ENST00000376545 MCM2P49736 904 aa13.07□□□□□ -0.32
ABCF1-202ENST00000376545 ZGPATQ8N5A5 531 aaKnown RBP13.07□□□□□ -0.32
ABCF1-202ENST00000376545 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
ABCF1-202ENST00000376545 CHMLP26374 656 aa13.06□□□□□ -0.32
ABCF1-202ENST00000376545 FKBP5Q13451 457 aaPredicted RBP13.06□□□□□ -0.32
ABCF1-202ENST00000376545 DDX49Q9Y6V7 483 aaKnown RBP13.06□□□□□ -0.32
ABCF1-202ENST00000376545 POLA2Q14181 598 aa13.06□□□□□ -0.32
ABCF1-202ENST00000376545 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
ABCF1-202ENST00000376545 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
ABCF1-202ENST00000376545 ERBB4Q15303 1308 aa13.05□□□□□ -0.32
ABCF1-202ENST00000376545 LRRFIP2Q9Y608 721 aaKnown RBP13.05□□□□□ -0.32
ABCF1-202ENST00000376545 RGPD2P0DJD1 1756 aa13.04□□□□□ -0.32
ABCF1-202ENST00000376545 ESPNB1AK53 854 aa13.04□□□□□ -0.32
ABCF1-202ENST00000376545 HOXB7P09629 217 aa13.04□□□□□ -0.32
ABCF1-202ENST00000376545 CCDC173Q0VFZ6 552 aa13.04□□□□□ -0.32
ABCF1-202ENST00000376545 INTS4Q96HW7 963 aaKnown RBP13.04□□□□□ -0.32
ABCF1-202ENST00000376545 TMX3Q96JJ7 454 aa13.04□□□□□ -0.32
ABCF1-202ENST00000376545 NCAPD2Q15021 1401 aa13.04□□□□□ -0.32
ABCF1-202ENST00000376545 RAB11FIP3O75154 756 aa13.03□□□□□ -0.32
ABCF1-202ENST00000376545 KCNA6P17658 529 aa13.03□□□□□ -0.32
ABCF1-202ENST00000376545 ZSCAN23Q3MJ62 389 aa13.03□□□□□ -0.32
ABCF1-202ENST00000376545 CAMTA1Q9Y6Y1 1673 aa13.03□□□□□ -0.32
ABCF1-202ENST00000376545 TSHZ3Q63HK5 1081 aa13.03□□□□□ -0.32
ABCF1-202ENST00000376545 PALD1Q9ULE6 856 aa13.03□□□□□ -0.32
ABCF1-202ENST00000376545 VSIG10Q8N0Z9 540 aa13.02□□□□□ -0.32
ABCF1-202ENST00000376545 GPT2Q8TD30 523 aa13.02□□□□□ -0.32
ABCF1-202ENST00000376545 IP6K1Q92551 441 aa13.02□□□□□ -0.32
ABCF1-202ENST00000376545 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.32
ABCF1-202ENST00000376545 SIPA1L3O60292 1781 aaPredicted RBP13.02□□□□□ -0.32
ABCF1-202ENST00000376545 BRD1O95696 1058 aa13.02□□□□□ -0.33
ABCF1-202ENST00000376545 NEK4P51957 841 aa13.02□□□□□ -0.33
ABCF1-202ENST00000376545 NASPP49321 788 aaPredicted RBP13.02□□□□□ -0.33
ABCF1-202ENST00000376545 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
ABCF1-202ENST00000376545 UNC5CLQ8IV45 518 aa13.02□□□□□ -0.33
ABCF1-202ENST00000376545 ABTB2Q8N961 1025 aa13.02□□□□□ -0.33
ABCF1-202ENST00000376545 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
ABCF1-202ENST00000376545 UBTFL1P0CB47 393 aaPredicted RBP13.01□□□□□ -0.33
ABCF1-202ENST00000376545 MCCP23508 829 aa13.01□□□□□ -0.33
ABCF1-202ENST00000376545 PI4K2BQ8TCG2 481 aa13.01□□□□□ -0.33
ABCF1-202ENST00000376545 PHAXQ9H814 394 aaKnown RBP13.01□□□□□ -0.33
ABCF1-202ENST00000376545 LMTK3Q96Q04 1460 aa13.01□□□□□ -0.33
ABCF1-202ENST00000376545 PLPPR3Q6T4P5 718 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms