RNA–Protein interactions for RNA: ENST00000376285.5

PCCA-202, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCCA, Length 2,494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-202ENST00000376285 BABAM1Q9NWV8 329 aa22.85■■□□□ 1.25
PCCA-202ENST00000376285 TAF7Q15545 349 aaPredicted RBP22.84■■□□□ 1.25
PCCA-202ENST00000376285 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
PCCA-202ENST00000376285 SLC4A2P04920 1241 aa22.84■■□□□ 1.25
PCCA-202ENST00000376285 RBM25P49756 843 aaKnown RBP22.84■■□□□ 1.25
PCCA-202ENST00000376285 DCTPP1Q9H773 170 aa22.84■■□□□ 1.25
PCCA-202ENST00000376285 COL18A1P39060 1754 aa22.84■■□□□ 1.25
PCCA-202ENST00000376285 PXDNQ92626 1479 aa22.84■■□□□ 1.25
PCCA-202ENST00000376285 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.83■■□□□ 1.25
PCCA-202ENST00000376285 BRPF3Q9ULD4 1205 aa22.83■■□□□ 1.25
PCCA-202ENST00000376285 ANKRD44Q8N8A2 993 aa22.82■■□□□ 1.24
PCCA-202ENST00000376285 TNS3Q68CZ2 1445 aa22.82■■□□□ 1.24
PCCA-202ENST00000376285 ZC3H6P61129 1189 aaKnown RBP22.81■■□□□ 1.24
PCCA-202ENST00000376285 ERBB3P21860 1342 aa22.8■■□□□ 1.24
PCCA-202ENST00000376285 PLEKHO1Q53GL0 409 aaPredicted RBP22.8■■□□□ 1.24
PCCA-202ENST00000376285 CEP85Q6P2H3 762 aa22.8■■□□□ 1.24
PCCA-202ENST00000376285 RPAP2Q8IXW5 612 aaPredicted RBP22.8■■□□□ 1.24
PCCA-202ENST00000376285 AKAP4Q5JQC9 854 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 MEIS3Q99687 375 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 LGR6Q9HBX8 967 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 SOS1Q07889 1333 aaPredicted RBP22.79■■□□□ 1.24
PCCA-202ENST00000376285 AMOTQ4VCS5 1084 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 ZNF530Q6P9A1 599 aaPredicted RBP22.79■■□□□ 1.24
PCCA-202ENST00000376285 TBC1D9Q6ZT07 1266 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 G2E3Q7L622 706 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 SPRYD3Q8NCJ5 442 aa22.79■■□□□ 1.24
PCCA-202ENST00000376285 PLEKHM2Q8IWE5 1019 aa22.78■■□□□ 1.24
PCCA-202ENST00000376285 N4BP2Q86UW6 1770 aaPredicted RBP22.77■■□□□ 1.24
PCCA-202ENST00000376285 SIPA1L3O60292 1781 aaPredicted RBP22.76■■□□□ 1.23
PCCA-202ENST00000376285 STK31Q9BXU1 1019 aa22.76■■□□□ 1.23
PCCA-202ENST00000376285 GSPT1P15170 499 aaKnown RBP22.76■■□□□ 1.23
PCCA-202ENST00000376285 CCDC30Q5VVM6 783 aa22.76■■□□□ 1.23
PCCA-202ENST00000376285 SPATA31A3Q5VYP0 1347 aa22.75■■□□□ 1.23
PCCA-202ENST00000376285 ADAMTS7Q9UKP4 1686 aa22.75■■□□□ 1.23
PCCA-202ENST00000376285 ABCC6O95255 1503 aa22.75■■□□□ 1.23
PCCA-202ENST00000376285 F6X3S4 739 aa22.74■■□□□ 1.23
PCCA-202ENST00000376285 BRINP3Q76B58 766 aa22.74■■□□□ 1.23
PCCA-202ENST00000376285 HSCBQ8IWL3 235 aa22.74■■□□□ 1.23
PCCA-202ENST00000376285 C16orf71Q8IYS4 520 aaPredicted RBP22.74■■□□□ 1.23
PCCA-202ENST00000376285 CABLES1Q8TDN4 633 aa22.74■■□□□ 1.23
PCCA-202ENST00000376285 ZNF335Q9H4Z2 1342 aaPredicted RBP22.74■■□□□ 1.23
PCCA-202ENST00000376285 OVOS2A0A0G2JMS6 1433 aa22.74■■□□□ 1.23
PCCA-202ENST00000376285 KIF2CQ99661 725 aa22.73■■□□□ 1.23
PCCA-202ENST00000376285 MPRIPQ6WCQ1 1025 aa22.73■■□□□ 1.23
PCCA-202ENST00000376285 C1orf141Q5JVX7 400 aa22.72■■□□□ 1.23
PCCA-202ENST00000376285 SNX21Q969T3 373 aa22.72■■□□□ 1.23
PCCA-202ENST00000376285 CDC45O75419 566 aa22.72■■□□□ 1.23
PCCA-202ENST00000376285 SLC4A10Q6U841 1118 aa22.72■■□□□ 1.23
PCCA-202ENST00000376285 NECTIN2Q92692 538 aa22.72■■□□□ 1.23
PCCA-202ENST00000376285 RNMTO43148 476 aaKnown RBP22.71■■□□□ 1.23
PCCA-202ENST00000376285 FLIIQ13045 1269 aa22.71■■□□□ 1.23
PCCA-202ENST00000376285 CCT4P50991 539 aaKnown RBP22.71■■□□□ 1.23
PCCA-202ENST00000376285 TEFQ10587 303 aa22.71■■□□□ 1.23
PCCA-202ENST00000376285 TTC22Q5TAA0 569 aa22.71■■□□□ 1.23
PCCA-202ENST00000376285 EIF4A1P60842 406 aaKnown RBP22.7■■□□□ 1.22
PCCA-202ENST00000376285 OTUD7AQ8TE49 926 aaPredicted RBP22.7■■□□□ 1.22
PCCA-202ENST00000376285 SCN11AQ9UI33 1791 aa22.7■■□□□ 1.22
PCCA-202ENST00000376285 CHMP5Q9NZZ3 219 aa22.69■■□□□ 1.22
PCCA-202ENST00000376285 HDGFL1Q5TGJ6 251 aa22.68■■□□□ 1.22
PCCA-202ENST00000376285 BTBD11A6QL63 1104 aa22.68■■□□□ 1.22
PCCA-202ENST00000376285 SMARCA5O60264 1052 aaPredicted RBP22.68■■□□□ 1.22
PCCA-202ENST00000376285 FKBP5Q13451 457 aaPredicted RBP22.68■■□□□ 1.22
PCCA-202ENST00000376285 CPDO75976 1380 aa22.68■■□□□ 1.22
PCCA-202ENST00000376285 KCNQ3O43525 872 aa22.67■■□□□ 1.22
PCCA-202ENST00000376285 NLRP2Q9NX02 1062 aa22.67■■□□□ 1.22
PCCA-202ENST00000376285 APBB1O00213 710 aa22.67■■□□□ 1.22
PCCA-202ENST00000376285 HOXB7P09629 217 aa22.67■■□□□ 1.22
PCCA-202ENST00000376285 CHRNA2Q15822 529 aa22.67■■□□□ 1.22
PCCA-202ENST00000376285 MEGF6O75095 1541 aa22.66■■□□□ 1.22
PCCA-202ENST00000376285 PXDNLA1KZ92 1463 aa22.66■■□□□ 1.22
PCCA-202ENST00000376285 SLAIN2Q9P270 581 aa22.66■■□□□ 1.22
PCCA-202ENST00000376285 ABCA3Q99758 1704 aa22.66■■□□□ 1.22
PCCA-202ENST00000376285 HMMRO75330 724 aa22.65■■□□□ 1.22
PCCA-202ENST00000376285 DDIT3P35638 169 aa22.65■■□□□ 1.22
PCCA-202ENST00000376285 RAPGEF4Q8WZA2 1011 aa22.65■■□□□ 1.22
PCCA-202ENST00000376285 PKD1L3Q7Z443 1732 aa22.65■■□□□ 1.22
PCCA-202ENST00000376285 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.21
PCCA-202ENST00000376285 CD2BP2O95400 341 aaKnown RBP22.63■■□□□ 1.21
PCCA-202ENST00000376285 GNAI2P04899 355 aa22.63■■□□□ 1.21
PCCA-202ENST00000376285 CSB-PGBD3P0DP91 1061 aa22.63■■□□□ 1.21
PCCA-202ENST00000376285 EIF2S2P20042 333 aaKnown RBP22.62■■□□□ 1.21
PCCA-202ENST00000376285 MCM4P33991 863 aa22.62■■□□□ 1.21
PCCA-202ENST00000376285 RBM42Q9BTD8 480 aaKnown RBP22.62■■□□□ 1.21
PCCA-202ENST00000376285 PHAXQ9H814 394 aaKnown RBP22.62■■□□□ 1.21
PCCA-202ENST00000376285 TATP17735 454 aaPredicted RBP22.62■■□□□ 1.21
PCCA-202ENST00000376285 SDSP20132 328 aa22.62■■□□□ 1.21
PCCA-202ENST00000376285 NHSL1Q5SYE7 1610 aa22.61■■□□□ 1.21
PCCA-202ENST00000376285 PLEKHG2Q9H7P9 1386 aa22.6■■□□□ 1.21
PCCA-202ENST00000376285 KDM6AO15550 1401 aaPredicted RBP22.6■■□□□ 1.21
PCCA-202ENST00000376285 HSP90AB1P08238 724 aaKnown RBP22.6■■□□□ 1.21
PCCA-202ENST00000376285 HEG1Q9ULI3 1381 aa22.6■■□□□ 1.21
PCCA-202ENST00000376285 CHMP4AQ9BY43 222 aa22.59■■□□□ 1.21
PCCA-202ENST00000376285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.59■■□□□ 1.216e-7■■□□□ 12.1
PCCA-202ENST00000376285 EIF5BO60841 1220 aaKnown RBP22.59■■□□□ 1.21
PCCA-202ENST00000376285 CHPF2Q9P2E5 772 aa22.59■■□□□ 1.21
PCCA-202ENST00000376285 GNAI3P08754 354 aa22.58■■□□□ 1.21
PCCA-202ENST00000376285 SPG7Q9UQ90 795 aa22.58■■□□□ 1.21
PCCA-202ENST00000376285 PHKG2P15735 406 aa22.58■■□□□ 1.21
PCCA-202ENST00000376285 K7ELQ4 463 aaPredicted RBP22.57■■□□□ 1.2
PCCA-202ENST00000376285 USP26Q9BXU7 913 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms