RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 NFATC2IPQ8NCF5 419 aa29.76■■■□□ 2.36
HLA-C-202ENST00000376237 FANCIQ9NVI1 1328 aa29.76■■■□□ 2.35
HLA-C-202ENST00000376237 MBIPQ9NS73 344 aa29.76■■■□□ 2.35
HLA-C-202ENST00000376237 TSPYL4Q9UJ04 414 aa29.76■■■□□ 2.35
HLA-C-202ENST00000376237 BTBD11A6QL63 1104 aa29.75■■■□□ 2.35
HLA-C-202ENST00000376237 TSR2Q969E8 191 aaKnown RBP29.74■■■□□ 2.35
HLA-C-202ENST00000376237 BCL9O00512 1426 aa29.73■■■□□ 2.35
HLA-C-202ENST00000376237 TMOD3Q9NYL9 352 aa29.72■■■□□ 2.35
HLA-C-202ENST00000376237 KRT27Q7Z3Y8 459 aa29.71■■■□□ 2.35
HLA-C-202ENST00000376237 MIS18AQ9NYP9 233 aa29.71■■■□□ 2.35
HLA-C-202ENST00000376237 VIRMAQ69YN4 1812 aaKnown RBP29.71■■■□□ 2.35
HLA-C-202ENST00000376237 SIPA1L3O60292 1781 aaPredicted RBP29.68■■■□□ 2.34
HLA-C-202ENST00000376237 CT47B1P0C2W7 299 aaPredicted RBP29.67■■■□□ 2.34
HLA-C-202ENST00000376237 PRIM1P49642 420 aaKnown RBP29.67■■■□□ 2.34
HLA-C-202ENST00000376237 EXOSC9Q06265 439 aaKnown RBP29.66■■■□□ 2.34
HLA-C-202ENST00000376237 ZNF790Q6PG37 636 aa29.66■■■□□ 2.34
HLA-C-202ENST00000376237 TOGARAM1Q9Y4F4 1720 aa29.66■■■□□ 2.34
HLA-C-202ENST00000376237 SYTL4Q96C24 671 aaPredicted RBP29.66■■■□□ 2.34
HLA-C-202ENST00000376237 RGS12O14924 1447 aa29.65■■■□□ 2.34
HLA-C-202ENST00000376237 FAM196AQ6ZSG2 479 aa29.65■■■□□ 2.34
HLA-C-202ENST00000376237 TTC5Q8N0Z6 440 aa29.65■■■□□ 2.34
HLA-C-202ENST00000376237 PIGBQ92521 554 aa29.65■■■□□ 2.34
HLA-C-202ENST00000376237 ACSBG1Q96GR2 724 aa29.63■■■□□ 2.33
HLA-C-202ENST00000376237 EIF4A1P60842 406 aaKnown RBP29.62■■■□□ 2.33
HLA-C-202ENST00000376237 SOS1Q07889 1333 aaPredicted RBP29.61■■■□□ 2.33
HLA-C-202ENST00000376237 DOT1LQ8TEK3 1739 aa29.61■■■□□ 2.33
HLA-C-202ENST00000376237 KDM3BQ7LBC6 1761 aa29.61■■■□□ 2.33
HLA-C-202ENST00000376237 SLC39A6Q13433 755 aa29.61■■■□□ 2.33
HLA-C-202ENST00000376237 FAM182BQ5T319 152 aa29.61■■■□□ 2.33
HLA-C-202ENST00000376237 ZNF428Q96B54 188 aa29.6■■■□□ 2.33
HLA-C-202ENST00000376237 BRWD3Q6RI45 1802 aa29.59■■■□□ 2.33
HLA-C-202ENST00000376237 KCNQ3O43525 872 aa29.59■■■□□ 2.33
HLA-C-202ENST00000376237 TWISTNBQ3B726 338 aaPredicted RBP29.59■■■□□ 2.33
HLA-C-202ENST00000376237 C8orf58Q8NAV2 365 aa29.59■■■□□ 2.33
HLA-C-202ENST00000376237 ITGB4P16144 1822 aa29.58■■■□□ 2.33
HLA-C-202ENST00000376237 FMNL2Q96PY5 1086 aa29.57■■■□□ 2.32
HLA-C-202ENST00000376237 CHMP4AQ9BY43 222 aa29.57■■■□□ 2.32
HLA-C-202ENST00000376237 KCNQ2O43526 872 aa29.56■■■□□ 2.32
HLA-C-202ENST00000376237 HOXB7P09629 217 aa29.56■■■□□ 2.32
HLA-C-202ENST00000376237 ILDR2Q71H61 639 aa29.56■■■□□ 2.32
HLA-C-202ENST00000376237 ATG3Q9NT62 314 aa29.56■■■□□ 2.32
HLA-C-202ENST00000376237 HEG1Q9ULI3 1381 aa29.56■■■□□ 2.32
HLA-C-202ENST00000376237 VAMP4O75379 141 aa29.55■■■□□ 2.32
HLA-C-202ENST00000376237 TSPYL6Q8N831 410 aa29.55■■■□□ 2.32
HLA-C-202ENST00000376237 RCAN3Q9UKA8 241 aa29.55■■■□□ 2.32
HLA-C-202ENST00000376237 SMARCC1Q92922 1105 aaPredicted RBP29.55■■■□□ 2.32
HLA-C-202ENST00000376237 ASAP1Q9ULH1 1129 aa29.55■■■□□ 2.32
HLA-C-202ENST00000376237 ELL2O00472 640 aaPredicted RBP29.54■■■□□ 2.32
HLA-C-202ENST00000376237 KRT24Q2M2I5 525 aa29.54■■■□□ 2.32
HLA-C-202ENST00000376237 ZNF496Q96IT1 587 aaPredicted RBP29.54■■■□□ 2.32
HLA-C-202ENST00000376237 PAPPAQ13219 1627 aa29.53■■■□□ 2.32
HLA-C-202ENST00000376237 BCL11BQ9C0K0 894 aaPredicted RBP29.53■■■□□ 2.32
HLA-C-202ENST00000376237 NHSQ6T4R5 1651 aa29.52■■■□□ 2.32
HLA-C-202ENST00000376237 GIGYF1O75420 1035 aaPredicted RBP29.52■■■□□ 2.32
HLA-C-202ENST00000376237 KAT6BQ8WYB5 2073 aa29.51■■■□□ 2.31
HLA-C-202ENST00000376237 SNRPA1P09661 255 aaKnown RBP29.5■■■□□ 2.31
HLA-C-202ENST00000376237 VSIG10Q8N0Z9 540 aa29.5■■■□□ 2.31
HLA-C-202ENST00000376237 PTCD1O75127 700 aaKnown RBP29.49■■■□□ 2.31
HLA-C-202ENST00000376237 ALDH1L2Q3SY69 923 aa29.49■■■□□ 2.31
HLA-C-202ENST00000376237 KCPQ6ZWJ8 1503 aa29.48■■■□□ 2.31
HLA-C-202ENST00000376237 RARSP54136 660 aaKnown RBP29.48■■■□□ 2.31
HLA-C-202ENST00000376237 UBR2Q8IWV8 1755 aa29.47■■■□□ 2.31
HLA-C-202ENST00000376237 TEX13AQ9BXU3 409 aaPredicted RBP29.46■■■□□ 2.31
HLA-C-202ENST00000376237 SBF2Q86WG5 1849 aa29.46■■■□□ 2.31
HLA-C-202ENST00000376237 CCDC30Q5VVM6 783 aa29.45■■■□□ 2.31
HLA-C-202ENST00000376237 PALLDQ8WX93 1383 aa29.45■■■□□ 2.31
HLA-C-202ENST00000376237 RBM42Q9BTD8 480 aaKnown RBP29.45■■■□□ 2.3
HLA-C-202ENST00000376237 TRIM37O94972 964 aa29.44■■■□□ 2.3
HLA-C-202ENST00000376237 HDGFL1Q5TGJ6 251 aa29.44■■■□□ 2.3
HLA-C-202ENST00000376237 PTF1AQ7RTS3 328 aa29.44■■■□□ 2.3
HLA-C-202ENST00000376237 SSH1Q8WYL5 1049 aa29.42■■■□□ 2.3
HLA-C-202ENST00000376237 BRPF1P55201 1214 aaPredicted RBP29.41■■■□□ 2.3
HLA-C-202ENST00000376237 LOC102724428A0A0B4J2F2 783 aa29.4■■■□□ 2.3
HLA-C-202ENST00000376237 EIF2S2P20042 333 aaKnown RBP29.4■■■□□ 2.3
HLA-C-202ENST00000376237 SIK1P57059 783 aa29.4■■■□□ 2.3
HLA-C-202ENST00000376237 STK31Q9BXU1 1019 aa29.4■■■□□ 2.3
HLA-C-202ENST00000376237 SMC4Q9NTJ3 1288 aa29.4■■■□□ 2.3
HLA-C-202ENST00000376237 BTAF1O14981 1849 aa29.4■■■□□ 2.3
HLA-C-202ENST00000376237 PRAMEF22A3QJZ6 481 aa29.39■■■□□ 2.3
HLA-C-202ENST00000376237 USP16Q9Y5T5 823 aa29.39■■■□□ 2.3
HLA-C-202ENST00000376237 BCAR3O75815 825 aa29.38■■■□□ 2.29
HLA-C-202ENST00000376237 SUPT16HQ9Y5B9 1047 aaKnown RBP29.38■■■□□ 2.29
HLA-C-202ENST00000376237 STARD3NLO95772 234 aa29.37■■■□□ 2.29
HLA-C-202ENST00000376237 SLC4A9Q96Q91 983 aa29.37■■■□□ 2.29
HLA-C-202ENST00000376237 ATP6V1AP38606 617 aa29.36■■■□□ 2.29
HLA-C-202ENST00000376237 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-202ENST00000376237 BCL2L13Q9BXK5 485 aa29.36■■■□□ 2.29
HLA-C-202ENST00000376237 DBF4Q9UBU7 674 aaPredicted RBP29.36■■■□□ 2.29
HLA-C-202ENST00000376237 ERBB4Q15303 1308 aa29.36■■■□□ 2.29
HLA-C-202ENST00000376237 MRPL50Q8N5N7 158 aaKnown RBP29.35■■■□□ 2.29
HLA-C-202ENST00000376237 KIF16BQ96L93 1317 aa29.35■■■□□ 2.29
HLA-C-202ENST00000376237 SLC4A2P04920 1241 aa29.35■■■□□ 2.29
HLA-C-202ENST00000376237 DNAJC10Q8IXB1 793 aa29.35■■■□□ 2.29
HLA-C-202ENST00000376237 NECTIN2Q92692 538 aa29.35■■■□□ 2.29
HLA-C-202ENST00000376237 RNF123Q5XPI4 1314 aa29.34■■■□□ 2.29
HLA-C-202ENST00000376237 TCERG1O14776 1098 aaKnown RBP29.33■■■□□ 2.29
HLA-C-202ENST00000376237 PLSCR1O15162 318 aa29.33■■■□□ 2.29
HLA-C-202ENST00000376237 HMGB2P26583 209 aaKnown RBP29.33■■■□□ 2.29
HLA-C-202ENST00000376237 ZNF831Q5JPB2 1677 aa29.33■■■□□ 2.29
HLA-C-202ENST00000376237 SOCS7O14512 581 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms