RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
PDPN-203ENST00000376061 THSD7AQ9UPZ6 1657 aa13.56□□□□□ -0.24
PDPN-203ENST00000376061 RNMTO43148 476 aaKnown RBP13.56□□□□□ -0.24
PDPN-203ENST00000376061 GLI3P10071 1580 aa13.56□□□□□ -0.24
PDPN-203ENST00000376061 MEX3CQ5U5Q3 659 aaKnown RBP13.56□□□□□ -0.24
PDPN-203ENST00000376061 REM2Q8IYK8 340 aaPredicted RBP13.56□□□□□ -0.24
PDPN-203ENST00000376061 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
PDPN-203ENST00000376061 LGR6Q9HBX8 967 aa13.56□□□□□ -0.24
PDPN-203ENST00000376061 PAPPAQ13219 1627 aa13.55□□□□□ -0.24
PDPN-203ENST00000376061 VPS72Q15906 364 aa13.55□□□□□ -0.24
PDPN-203ENST00000376061 FOXD4L1Q9NU39 408 aa13.55□□□□□ -0.24
PDPN-203ENST00000376061 THRAP3Q9Y2W1 955 aaKnown RBP13.55□□□□□ -0.24
PDPN-203ENST00000376061 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
PDPN-203ENST00000376061 HAX1O00165 279 aa13.54□□□□□ -0.24
PDPN-203ENST00000376061 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
PDPN-203ENST00000376061 TSPYL4Q9UJ04 414 aa13.54□□□□□ -0.24
PDPN-203ENST00000376061 ZBTB12Q9Y330 459 aaPredicted RBP13.54□□□□□ -0.24
PDPN-203ENST00000376061 AFF2P51816 1311 aa13.54□□□□□ -0.24
PDPN-203ENST00000376061 ITGB4P16144 1822 aa13.53□□□□□ -0.24
PDPN-203ENST00000376061 HSP90AB1P08238 724 aaKnown RBP13.53□□□□□ -0.24
PDPN-203ENST00000376061 RRP1P56182 461 aaKnown RBP13.53□□□□□ -0.24
PDPN-203ENST00000376061 TAF7Q15545 349 aaPredicted RBP13.53□□□□□ -0.24
PDPN-203ENST00000376061 CDCA7Q9BWT1 371 aaPredicted RBP13.53□□□□□ -0.24
PDPN-203ENST00000376061 BABAM1Q9NWV8 329 aa13.53□□□□□ -0.24
PDPN-203ENST00000376061 MIS18AQ9NYP9 233 aa13.53□□□□□ -0.24
PDPN-203ENST00000376061 USP21Q9UK80 565 aa13.53□□□□□ -0.24
PDPN-203ENST00000376061 CCDC9Q9Y3X0 531 aaKnown RBP13.53□□□□□ -0.24
PDPN-203ENST00000376061 ATRNO75882 1429 aa13.52□□□□□ -0.24
PDPN-203ENST00000376061 UBR2Q8IWV8 1755 aa13.52□□□□□ -0.24
PDPN-203ENST00000376061 TEFQ10587 303 aa13.52□□□□□ -0.25
PDPN-203ENST00000376061 BARGINQ6ZT62 677 aa13.52□□□□□ -0.25
PDPN-203ENST00000376061 DCAF5Q96JK2 942 aa13.52□□□□□ -0.25
PDPN-203ENST00000376061 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.25
PDPN-203ENST00000376061 NEFLP07196 543 aa13.51□□□□□ -0.25
PDPN-203ENST00000376061 RARSP54136 660 aaKnown RBP13.51□□□□□ -0.25
PDPN-203ENST00000376061 NKX1-1Q15270 411 aaPredicted RBP13.51□□□□□ -0.25
PDPN-203ENST00000376061 TSPYL6Q8N831 410 aa13.51□□□□□ -0.25
PDPN-203ENST00000376061 C8orf58Q8NAV2 365 aa13.51□□□□□ -0.25
PDPN-203ENST00000376061 C5P01031 1676 aa13.51□□□□□ -0.25
PDPN-203ENST00000376061 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
PDPN-203ENST00000376061 DDX54Q8TDD1 881 aaKnown RBP13.5□□□□□ -0.25
PDPN-203ENST00000376061 FBXO41Q8TF61 875 aa13.5□□□□□ -0.25
PDPN-203ENST00000376061 SLC52A2Q9HAB3 445 aa13.5□□□□□ -0.25
PDPN-203ENST00000376061 BCAR3O75815 825 aa13.49□□□□□ -0.25
PDPN-203ENST00000376061 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
PDPN-203ENST00000376061 LAMB4A4D0S4 1761 aa13.49□□□□□ -0.25
PDPN-203ENST00000376061 BTBD11A6QL63 1104 aa13.48□□□□□ -0.25
PDPN-203ENST00000376061 VAMP4O75379 141 aa13.48□□□□□ -0.25
PDPN-203ENST00000376061 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
PDPN-203ENST00000376061 FAM98CQ17RN3 349 aaKnown RBP13.48□□□□□ -0.25
PDPN-203ENST00000376061 EXOC5O00471 708 aa13.47□□□□□ -0.25
PDPN-203ENST00000376061 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
PDPN-203ENST00000376061 DDB1Q16531 1140 aa13.47□□□□□ -0.25
PDPN-203ENST00000376061 SSH1Q8WYL5 1049 aa13.47□□□□□ -0.25
PDPN-203ENST00000376061 ZNF428Q96B54 188 aa13.47□□□□□ -0.25
PDPN-203ENST00000376061 BCL2L13Q9BXK5 485 aa13.47□□□□□ -0.25
PDPN-203ENST00000376061 CACNA1FO60840 1977 aa13.47□□□□□ -0.25
PDPN-203ENST00000376061 ERVV-2B6SEH9 535 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 KCNQ3O43525 872 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 PLIN1O60240 522 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 FKBP8Q14318 412 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 ALDH1L2Q3SY69 923 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 KCPQ6ZWJ8 1503 aa13.46□□□□□ -0.25
PDPN-203ENST00000376061 SOS1Q07889 1333 aaPredicted RBP13.46□□□□□ -0.26
PDPN-203ENST00000376061 CABP4P57796 275 aa13.45□□□□□ -0.26
PDPN-203ENST00000376061 EIF4A1P60842 406 aaKnown RBP13.45□□□□□ -0.26
PDPN-203ENST00000376061 NFATC2IPQ8NCF5 419 aa13.45□□□□□ -0.26
PDPN-203ENST00000376061 TRPC5Q9UL62 973 aaPredicted RBP13.45□□□□□ -0.26
PDPN-203ENST00000376061 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
PDPN-203ENST00000376061 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.45□□□□□ -0.26
PDPN-203ENST00000376061 GJD4Q96KN9 370 aaPredicted RBP13.45□□□□□ -0.26
PDPN-203ENST00000376061 MARCH10Q8NA82 808 aaPredicted RBP13.44□□□□□ -0.26
PDPN-203ENST00000376061 BRWD3Q6RI45 1802 aa13.44□□□□□ -0.26
PDPN-203ENST00000376061 NHSQ6T4R5 1651 aa13.43□□□□□ -0.26
PDPN-203ENST00000376061 KIF16BQ96L93 1317 aa13.43□□□□□ -0.26
PDPN-203ENST00000376061 HOXB7P09629 217 aa13.43□□□□□ -0.26
PDPN-203ENST00000376061 SLC39A6Q13433 755 aa13.43□□□□□ -0.26
PDPN-203ENST00000376061 ZNF790Q6PG37 636 aa13.43□□□□□ -0.26
PDPN-203ENST00000376061 BCL9O00512 1426 aa13.42□□□□□ -0.26
PDPN-203ENST00000376061 KAT6BQ8WYB5 2073 aa13.42□□□□□ -0.26
PDPN-203ENST00000376061 N4BP2Q86UW6 1770 aaPredicted RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 PITPNM1O00562 1244 aa13.42□□□□□ -0.26
PDPN-203ENST00000376061 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 CANXP27824 592 aaKnown RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 FXR2P51116 673 aaKnown RBP eCLIP13.42□□□□□ -0.26
PDPN-203ENST00000376061 BRPF1P55201 1214 aaPredicted RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 C20orf194Q5TEA3 1177 aa13.42□□□□□ -0.26
PDPN-203ENST00000376061 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 FRAT1Q92837 279 aaPredicted RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 TMOD3Q9NYL9 352 aa13.42□□□□□ -0.26
PDPN-203ENST00000376061 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
PDPN-203ENST00000376061 SBF2Q86WG5 1849 aa13.42□□□□□ -0.26
PDPN-203ENST00000376061 A0A0G2JS52 829 aa13.41□□□□□ -0.26
PDPN-203ENST00000376061 MYT1Q01538 1121 aa13.41□□□□□ -0.26
PDPN-203ENST00000376061 ONECUT3O60422 494 aaPredicted RBP13.4□□□□□ -0.26
PDPN-203ENST00000376061 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
PDPN-203ENST00000376061 TJP1Q07157 1748 aa13.4□□□□□ -0.26
PDPN-203ENST00000376061 TTC5Q8N0Z6 440 aa13.4□□□□□ -0.26
PDPN-203ENST00000376061 ZNF496Q96IT1 587 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms