RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 LGR6Q9HBX8 967 aa26.79■■□□□ 1.88
C6orf48-205ENST00000375640 ZEB1P37275 1124 aaPredicted RBP26.78■■□□□ 1.88
C6orf48-205ENST00000375640 LINC00116Q8NCU8 138 aa26.78■■□□□ 1.88
C6orf48-205ENST00000375640 ARXQ96QS3 562 aa26.78■■□□□ 1.88
C6orf48-205ENST00000375640 RBM42Q9BTD8 480 aaKnown RBP26.78■■□□□ 1.88
C6orf48-205ENST00000375640 GAS2L2Q8NHY3 880 aa26.77■■□□□ 1.88
C6orf48-205ENST00000375640 SLC52A2Q9HAB3 445 aa26.77■■□□□ 1.88
C6orf48-205ENST00000375640 POLD1P28340 1107 aa26.76■■□□□ 1.87
C6orf48-205ENST00000375640 DDX10Q13206 875 aaKnown RBP26.76■■□□□ 1.87
C6orf48-205ENST00000375640 U2AF1L5P0DN76 240 aaPredicted RBP26.75■■□□□ 1.87
C6orf48-205ENST00000375640 U2AF1Q01081 240 aaKnown RBP eCLIP26.75■■□□□ 1.87
C6orf48-205ENST00000375640 SLC4A9Q96Q91 983 aa26.75■■□□□ 1.87
C6orf48-205ENST00000375640 RSPH6AQ9H0K4 717 aa26.75■■□□□ 1.87
C6orf48-205ENST00000375640 ITGB4P16144 1822 aa26.74■■□□□ 1.87
C6orf48-205ENST00000375640 FCHSD2O94868 740 aa26.74■■□□□ 1.87
C6orf48-205ENST00000375640 SSFA2P28290 1259 aa26.73■■□□□ 1.87
C6orf48-205ENST00000375640 PRKAR2BP31323 418 aa26.73■■□□□ 1.87
C6orf48-205ENST00000375640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.72■■□□□ 1.87
C6orf48-205ENST00000375640 GNAT3A8MTJ3 354 aa26.72■■□□□ 1.87
C6orf48-205ENST00000375640 RALBP1Q15311 655 aa26.72■■□□□ 1.87
C6orf48-205ENST00000375640 RC3H1Q5TC82 1133 aaKnown RBP26.72■■□□□ 1.87
C6orf48-205ENST00000375640 SYT17Q9BSW7 474 aa26.72■■□□□ 1.87
C6orf48-205ENST00000375640 FHDC1Q9C0D6 1143 aaPredicted RBP26.72■■□□□ 1.87
C6orf48-205ENST00000375640 PTCD1O75127 700 aaKnown RBP26.71■■□□□ 1.87
C6orf48-205ENST00000375640 PHACTR3Q96KR7 559 aa26.71■■□□□ 1.87
C6orf48-205ENST00000375640 GNPATO15228 680 aa26.7■■□□□ 1.86
C6orf48-205ENST00000375640 AMIGO3Q86WK7 504 aa26.7■■□□□ 1.86
C6orf48-205ENST00000375640 DCAF8L1A6NGE4 600 aa26.69■■□□□ 1.86
C6orf48-205ENST00000375640 PHF14O94880 888 aa26.69■■□□□ 1.86
C6orf48-205ENST00000375640 IL17REQ8NFR9 667 aa26.68■■□□□ 1.86
C6orf48-205ENST00000375640 RTCBQ9Y3I0 505 aaKnown RBP26.67■■□□□ 1.86
C6orf48-205ENST00000375640 MAP3K5Q99683 1374 aa26.67■■□□□ 1.86
C6orf48-205ENST00000375640 QSER1Q2KHR3 1735 aa26.66■■□□□ 1.86
C6orf48-205ENST00000375640 SMIM5Q71RC9 77 aa26.66■■□□□ 1.86
C6orf48-205ENST00000375640 C5P01031 1676 aa26.66■■□□□ 1.86
C6orf48-205ENST00000375640 CNTNAP4Q9C0A0 1308 aa26.65■■□□□ 1.86
C6orf48-205ENST00000375640 C4BP0C0L5 1744 aa26.65■■□□□ 1.86
C6orf48-205ENST00000375640 TRAPPC3LQ5T215 181 aa26.65■■□□□ 1.86
C6orf48-205ENST00000375640 MSL1Q68DK7 614 aa26.65■■□□□ 1.86
C6orf48-205ENST00000375640 TEFQ10587 303 aa26.64■■□□□ 1.86
C6orf48-205ENST00000375640 SLC39A6Q13433 755 aa26.64■■□□□ 1.86
C6orf48-205ENST00000375640 RPS6KA4O75676 772 aa26.63■■□□□ 1.85
C6orf48-205ENST00000375640 ADRA2BP18089 450 aa26.63■■□□□ 1.85
C6orf48-205ENST00000375640 MRC1P22897 1456 aa26.62■■□□□ 1.85
C6orf48-205ENST00000375640 VSIG10Q8N0Z9 540 aa26.6■■□□□ 1.85
C6orf48-205ENST00000375640 HTATSF1O43719 755 aaKnown RBP26.59■■□□□ 1.85
C6orf48-205ENST00000375640 NEFMP07197 916 aa26.59■■□□□ 1.85
C6orf48-205ENST00000375640 CRKLP46109 303 aaKnown RBP26.59■■□□□ 1.85
C6orf48-205ENST00000375640 TTC5Q8N0Z6 440 aa26.59■■□□□ 1.85
C6orf48-205ENST00000375640 RTF1Q92541 710 aaKnown RBP26.59■■□□□ 1.85
C6orf48-205ENST00000375640 ARHGEF1Q92888 912 aaKnown RBP26.59■■□□□ 1.85
C6orf48-205ENST00000375640 PNNQ9H307 717 aaKnown RBP26.59■■□□□ 1.85
C6orf48-205ENST00000375640 CEMIPQ8WUJ3 1361 aa26.58■■□□□ 1.85
C6orf48-205ENST00000375640 DNAJC10Q8IXB1 793 aa26.58■■□□□ 1.85
C6orf48-205ENST00000375640 KLHL34Q8N239 644 aa26.58■■□□□ 1.85
C6orf48-205ENST00000375640 TAF1LQ8IZX4 1826 aa26.58■■□□□ 1.84
C6orf48-205ENST00000375640 ZNF831Q5JPB2 1677 aa26.57■■□□□ 1.84
C6orf48-205ENST00000375640 RFC4P35249 363 aa26.56■■□□□ 1.84
C6orf48-205ENST00000375640 INTS5Q6P9B9 1019 aaKnown RBP26.56■■□□□ 1.84
C6orf48-205ENST00000375640 ZNF790Q6PG37 636 aa26.56■■□□□ 1.84
C6orf48-205ENST00000375640 MYBBP1AQ9BQG0 1328 aaKnown RBP26.56■■□□□ 1.84
C6orf48-205ENST00000375640 TUBGCP6Q96RT7 1819 aa26.55■■□□□ 1.84
C6orf48-205ENST00000375640 CYP19A1P11511 503 aaPredicted RBP26.55■■□□□ 1.84
C6orf48-205ENST00000375640 NLGN1Q8N2Q7 840 aa26.55■■□□□ 1.84
C6orf48-205ENST00000375640 PLEKHF1Q96S99 279 aa26.55■■□□□ 1.84
C6orf48-205ENST00000375640 SCN11AQ9UI33 1791 aa26.55■■□□□ 1.84
C6orf48-205ENST00000375640 ADAMTS7Q9UKP4 1686 aa26.54■■□□□ 1.84
C6orf48-205ENST00000375640 CD2APQ9Y5K6 639 aa26.54■■□□□ 1.84
C6orf48-205ENST00000375640 CCDC87Q9NVE4 849 aa26.53■■□□□ 1.84
C6orf48-205ENST00000375640 BTBD11A6QL63 1104 aa26.52■■□□□ 1.84
C6orf48-205ENST00000375640 ZNF496Q96IT1 587 aaPredicted RBP26.52■■□□□ 1.84
C6orf48-205ENST00000375640 TEX13AQ9BXU3 409 aaPredicted RBP26.52■■□□□ 1.84
C6orf48-205ENST00000375640 COL24A1Q17RW2 1714 aa26.51■■□□□ 1.83
C6orf48-205ENST00000375640 STARD3NLO95772 234 aa26.51■■□□□ 1.83
C6orf48-205ENST00000375640 MCM10Q7L590 875 aa26.51■■□□□ 1.83
C6orf48-205ENST00000375640 GYS1P13807 737 aa26.49■■□□□ 1.83
C6orf48-205ENST00000375640 NLGN2Q8NFZ4 835 aa26.49■■□□□ 1.83
C6orf48-205ENST00000375640 FMNL2Q96PY5 1086 aa26.49■■□□□ 1.83
C6orf48-205ENST00000375640 PRKRIP1Q9H875 184 aaPredicted RBP26.49■■□□□ 1.83
C6orf48-205ENST00000375640 KCPQ6ZWJ8 1503 aa26.49■■□□□ 1.83
C6orf48-205ENST00000375640 UBR3Q6ZT12 1888 aa26.49■■□□□ 1.83
C6orf48-205ENST00000375640 MMP10P09238 476 aa26.48■■□□□ 1.83
C6orf48-205ENST00000375640 DCTN1Q14203 1278 aa26.48■■□□□ 1.83
C6orf48-205ENST00000375640 HEG1Q9ULI3 1381 aa26.47■■□□□ 1.83
C6orf48-205ENST00000375640 MAPK8IP3Q9UPT6 1336 aa26.47■■□□□ 1.83
C6orf48-205ENST00000375640 NFE2L2Q16236 605 aa26.47■■□□□ 1.83
C6orf48-205ENST00000375640 SOS1Q07889 1333 aaPredicted RBP26.46■■□□□ 1.83
C6orf48-205ENST00000375640 TAF7Q15545 349 aaPredicted RBP26.46■■□□□ 1.83
C6orf48-205ENST00000375640 GPR162Q16538 588 aa26.46■■□□□ 1.83
C6orf48-205ENST00000375640 KCNQ3O43525 872 aa26.45■■□□□ 1.82
C6orf48-205ENST00000375640 ZBTB1Q9Y2K1 713 aa26.45■■□□□ 1.82
C6orf48-205ENST00000375640 USP42Q9H9J4 1324 aaKnown RBP26.44■■□□□ 1.82
C6orf48-205ENST00000375640 ZPR1O75312 459 aa26.43■■□□□ 1.82
C6orf48-205ENST00000375640 SRP68Q9UHB9 627 aaKnown RBP26.43■■□□□ 1.82
C6orf48-205ENST00000375640 CICQ96RK0 1608 aaPredicted RBP26.42■■□□□ 1.82
C6orf48-205ENST00000375640 COL5A3P25940 1745 aaPredicted RBP26.42■■□□□ 1.82
C6orf48-205ENST00000375640 YY1P25490 414 aa26.41■■□□□ 1.82
C6orf48-205ENST00000375640 CANXP27824 592 aaKnown RBP26.41■■□□□ 1.82
C6orf48-205ENST00000375640 PNISRQ8TF01 805 aaKnown RBP26.41■■□□□ 1.82
C6orf48-205ENST00000375640 NARFQ9UHQ1 456 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 104.5 ms