RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 AMOTQ4VCS5 1084 aa21.09■□□□□ 0.97
SDHB-201ENST00000375499 KLHL34Q8N239 644 aa21.09■□□□□ 0.97
SDHB-201ENST00000375499 ASAP1Q9ULH1 1129 aa21.09■□□□□ 0.97
SDHB-201ENST00000375499 PELP1Q8IZL8 1130 aaKnown RBP21.07■□□□□ 0.96
SDHB-201ENST00000375499 SMARCC1Q92922 1105 aaPredicted RBP21.06■□□□□ 0.96
SDHB-201ENST00000375499 DCAF5Q96JK2 942 aa21.06■□□□□ 0.96
SDHB-201ENST00000375499 ATG3Q9NT62 314 aa21.06■□□□□ 0.96
SDHB-201ENST00000375499 UBR3Q6ZT12 1888 aa21.06■□□□□ 0.96
SDHB-201ENST00000375499 PPP2R1AP30153 589 aa21.05■□□□□ 0.96
SDHB-201ENST00000375499 AMIGO3Q86WK7 504 aa21.05■□□□□ 0.96
SDHB-201ENST00000375499 LOC102724428A0A0B4J2F2 783 aa21.04■□□□□ 0.96
SDHB-201ENST00000375499 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
SDHB-201ENST00000375499 HSP90AB1P08238 724 aaKnown RBP21.04■□□□□ 0.96
SDHB-201ENST00000375499 SIK1P57059 783 aa21.04■□□□□ 0.96
SDHB-201ENST00000375499 FLAD1Q8NFF5 587 aa21.04■□□□□ 0.96
SDHB-201ENST00000375499 ADAMTS7Q9UKP4 1686 aa21.04■□□□□ 0.96
SDHB-201ENST00000375499 ITPK1Q13572 414 aa21.03■□□□□ 0.96
SDHB-201ENST00000375499 C1orf141Q5JVX7 400 aa21.03■□□□□ 0.96
SDHB-201ENST00000375499 LINC00116Q8NCU8 138 aa21.03■□□□□ 0.96
SDHB-201ENST00000375499 NLGN2Q8NFZ4 835 aa21.03■□□□□ 0.96
SDHB-201ENST00000375499 SLC4A9Q96Q91 983 aa21.03■□□□□ 0.96
SDHB-201ENST00000375499 CD2APQ9Y5K6 639 aa21.03■□□□□ 0.96
SDHB-201ENST00000375499 U2SURPO15042 1029 aaKnown RBP21.02■□□□□ 0.96
SDHB-201ENST00000375499 MTHFSDQ2M296 383 aaKnown RBP21.02■□□□□ 0.96
SDHB-201ENST00000375499 SMIM5Q71RC9 77 aa21.02■□□□□ 0.96
SDHB-201ENST00000375499 COL23A1Q86Y22 540 aaPredicted RBP21.02■□□□□ 0.96
SDHB-201ENST00000375499 MRC1P22897 1456 aa21.01■□□□□ 0.95
SDHB-201ENST00000375499 COL5A3P25940 1745 aaPredicted RBP21.01■□□□□ 0.95
SDHB-201ENST00000375499 ZNF831Q5JPB2 1677 aa21■□□□□ 0.95
SDHB-201ENST00000375499 CABP4P57796 275 aa21■□□□□ 0.95
SDHB-201ENST00000375499 AKAP4Q5JQC9 854 aa21■□□□□ 0.95
SDHB-201ENST00000375499 LGR6Q9HBX8 967 aa21■□□□□ 0.95
SDHB-201ENST00000375499 MSH5O43196 834 aa20.99■□□□□ 0.95
SDHB-201ENST00000375499 YBX3P16989 372 aaKnown RBP eCLIP20.99■□□□□ 0.955e-10■■□□□ 12.9
SDHB-201ENST00000375499 NFATC2IPQ8NCF5 419 aa20.98■□□□□ 0.95
SDHB-201ENST00000375499 TJP1Q07157 1748 aa20.98■□□□□ 0.95
SDHB-201ENST00000375499 ATP6V1AP38606 617 aa20.97■□□□□ 0.95
SDHB-201ENST00000375499 RSPH6AQ9H0K4 717 aa20.97■□□□□ 0.95
SDHB-201ENST00000375499 MYH14Q7Z406 1995 aaKnown RBP20.97■□□□□ 0.95
SDHB-201ENST00000375499 RNMTO43148 476 aaKnown RBP20.96■□□□□ 0.95
SDHB-201ENST00000375499 CFAP53Q96M91 514 aa20.96■□□□□ 0.95
SDHB-201ENST00000375499 MSL1Q68DK7 614 aa20.95■□□□□ 0.94
SDHB-201ENST00000375499 AK7Q96M32 723 aa20.95■□□□□ 0.94
SDHB-201ENST00000375499 RBM42Q9BTD8 480 aaKnown RBP20.95■□□□□ 0.94
SDHB-201ENST00000375499 GPBP1L1Q9HC44 474 aaPredicted RBP20.95■□□□□ 0.94
SDHB-201ENST00000375499 CICQ96RK0 1608 aaPredicted RBP20.95■□□□□ 0.94
SDHB-201ENST00000375499 PHF14O94880 888 aa20.94■□□□□ 0.94
SDHB-201ENST00000375499 DDX10Q13206 875 aaKnown RBP20.94■□□□□ 0.94
SDHB-201ENST00000375499 SLC52A2Q9HAB3 445 aa20.94■□□□□ 0.94
SDHB-201ENST00000375499 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
SDHB-201ENST00000375499 PRKAR2BP31323 418 aa20.93■□□□□ 0.94
SDHB-201ENST00000375499 PHACTR3Q96KR7 559 aa20.93■□□□□ 0.94
SDHB-201ENST00000375499 KCPQ6ZWJ8 1503 aa20.93■□□□□ 0.94
SDHB-201ENST00000375499 GOLGB1Q14789 3259 aaKnown RBP20.93■□□□□ 0.94
SDHB-201ENST00000375499 PTCD1O75127 700 aaKnown RBP20.92■□□□□ 0.94
SDHB-201ENST00000375499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.91■□□□□ 0.94
SDHB-201ENST00000375499 GNPATO15228 680 aa20.91■□□□□ 0.94
SDHB-201ENST00000375499 UBR2Q8IWV8 1755 aa20.91■□□□□ 0.94
SDHB-201ENST00000375499 ATP10DQ9P241 1426 aa20.91■□□□□ 0.94
SDHB-201ENST00000375499 U2AF1L5P0DN76 240 aaPredicted RBP20.9■□□□□ 0.94
SDHB-201ENST00000375499 HSPA6P17066 643 aa20.9■□□□□ 0.94
SDHB-201ENST00000375499 U2AF1Q01081 240 aaKnown RBP eCLIP20.9■□□□□ 0.94
SDHB-201ENST00000375499 SLC39A6Q13433 755 aa20.9■□□□□ 0.94
SDHB-201ENST00000375499 C4AP0C0L4 1744 aa20.9■□□□□ 0.94
SDHB-201ENST00000375499 SSFA2P28290 1259 aa20.89■□□□□ 0.93
SDHB-201ENST00000375499 IL17REQ8NFR9 667 aa20.88■□□□□ 0.93
SDHB-201ENST00000375499 GAS2L2Q8NHY3 880 aa20.88■□□□□ 0.93
SDHB-201ENST00000375499 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
SDHB-201ENST00000375499 CNTNAP4Q9C0A0 1308 aa20.87■□□□□ 0.93
SDHB-201ENST00000375499 CEP350Q5VT06 3117 aa20.86■□□□□ 0.93
SDHB-201ENST00000375499 ADCY9O60503 1353 aa20.85■□□□□ 0.93
SDHB-201ENST00000375499 GNAT3A8MTJ3 354 aa20.85■□□□□ 0.93
SDHB-201ENST00000375499 CEMIPQ8WUJ3 1361 aa20.85■□□□□ 0.93
SDHB-201ENST00000375499 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
SDHB-201ENST00000375499 RC3H1Q5TC82 1133 aaKnown RBP20.84■□□□□ 0.93
SDHB-201ENST00000375499 DNAJC10Q8IXB1 793 aa20.84■□□□□ 0.93
SDHB-201ENST00000375499 FCHSD2O94868 740 aa20.83■□□□□ 0.93
SDHB-201ENST00000375499 CRKLP46109 303 aaKnown RBP20.83■□□□□ 0.93
SDHB-201ENST00000375499 RTCBQ9Y3I0 505 aaKnown RBP20.82■□□□□ 0.92
SDHB-201ENST00000375499 RALBP1Q15311 655 aa20.81■□□□□ 0.92
SDHB-201ENST00000375499 RPS6KA4O75676 772 aa20.8■□□□□ 0.92
SDHB-201ENST00000375499 INTS5Q6P9B9 1019 aaKnown RBP20.8■□□□□ 0.92
SDHB-201ENST00000375499 ARHGEF1Q92888 912 aaKnown RBP20.8■□□□□ 0.92
SDHB-201ENST00000375499 DCTN1Q14203 1278 aa20.79■□□□□ 0.92
SDHB-201ENST00000375499 MCM10Q7L590 875 aa20.79■□□□□ 0.92
SDHB-201ENST00000375499 PLEKHF1Q96S99 279 aa20.79■□□□□ 0.92
SDHB-201ENST00000375499 KCNQ3O43525 872 aa20.78■□□□□ 0.92
SDHB-201ENST00000375499 TEFQ10587 303 aa20.78■□□□□ 0.92
SDHB-201ENST00000375499 TRAPPC3LQ5T215 181 aa20.78■□□□□ 0.92
SDHB-201ENST00000375499 CYP19A1P11511 503 aaPredicted RBP20.77■□□□□ 0.92
SDHB-201ENST00000375499 ADRA2BP18089 450 aa20.77■□□□□ 0.92
SDHB-201ENST00000375499 ZNF496Q96IT1 587 aaPredicted RBP20.77■□□□□ 0.92
SDHB-201ENST00000375499 MYBBP1AQ9BQG0 1328 aaKnown RBP20.77■□□□□ 0.91
SDHB-201ENST00000375499 ZNF790Q6PG37 636 aa20.76■□□□□ 0.91
SDHB-201ENST00000375499 SRP68Q9UHB9 627 aaKnown RBP20.76■□□□□ 0.91
SDHB-201ENST00000375499 ZBTB1Q9Y2K1 713 aa20.76■□□□□ 0.91
SDHB-201ENST00000375499 HEG1Q9ULI3 1381 aa20.75■□□□□ 0.91
SDHB-201ENST00000375499 GYS1P13807 737 aa20.75■□□□□ 0.91
SDHB-201ENST00000375499 ZEB1P37275 1124 aaPredicted RBP20.75■□□□□ 0.91
SDHB-201ENST00000375499 APLP1P51693 650 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms