RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 NECTIN2Q92692 538 aa14.86□□□□□ -0.03
C9orf3-203ENST00000375315 AATKQ6ZMQ8 1374 aa14.85□□□□□ -0.03
C9orf3-203ENST00000375315 FOXD4L1Q9NU39 408 aa14.85□□□□□ -0.03
C9orf3-203ENST00000375315 K7ELQ4 463 aaPredicted RBP14.85□□□□□ -0.03
C9orf3-203ENST00000375315 MTHFSDQ2M296 383 aaKnown RBP14.85□□□□□ -0.03
C9orf3-203ENST00000375315 AXIN2Q9Y2T1 843 aa14.85□□□□□ -0.03
C9orf3-203ENST00000375315 ANKARQ7Z5J8 1434 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 TSPYL6Q8N831 410 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 LMTK3Q96Q04 1460 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 ADGRB2O60241 1585 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 SSH2Q76I76 1423 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
C9orf3-203ENST00000375315 NBPF6Q5VWK0 638 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 NBPF4Q96M43 638 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 SLAIN2Q9P270 581 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 FLT4P35916 1363 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
C9orf3-203ENST00000375315 RTF1Q92541 710 aaKnown RBP14.83□□□□□ -0.03
C9orf3-203ENST00000375315 NLRP2Q9NX02 1062 aa14.83□□□□□ -0.03
C9orf3-203ENST00000375315 PTMAP06454 111 aaKnown RBP14.83□□□□□ -0.04
C9orf3-203ENST00000375315 CDK11BP21127 795 aaKnown RBP14.83□□□□□ -0.04
C9orf3-203ENST00000375315 RLBP1P12271 317 aa14.83□□□□□ -0.04
C9orf3-203ENST00000375315 LRRC7Q96NW7 1537 aa14.82□□□□□ -0.04
C9orf3-203ENST00000375315 PIP4K2BP78356 416 aa14.82□□□□□ -0.04
C9orf3-203ENST00000375315 PRIM1P49642 420 aaKnown RBP14.82□□□□□ -0.04
C9orf3-203ENST00000375315 BRINP3Q76B58 766 aa14.82□□□□□ -0.04
C9orf3-203ENST00000375315 MON2Q7Z3U7 1717 aa14.82□□□□□ -0.04
C9orf3-203ENST00000375315 GTF2F1P35269 517 aaKnown RBP eCLIP14.81□□□□□ -0.041e-6■■■■□ 26.4
C9orf3-203ENST00000375315 MCTP1Q6DN14 999 aa14.81□□□□□ -0.04
C9orf3-203ENST00000375315 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
C9orf3-203ENST00000375315 SBNO1A3KN83 1393 aa14.81□□□□□ -0.04
C9orf3-203ENST00000375315 SSH1Q8WYL5 1049 aa14.81□□□□□ -0.04
C9orf3-203ENST00000375315 MBIPQ9NS73 344 aa14.81□□□□□ -0.04
C9orf3-203ENST00000375315 AKAP12Q02952 1782 aa14.8□□□□□ -0.04
C9orf3-203ENST00000375315 ATP2B3Q16720 1220 aa14.8□□□□□ -0.04
C9orf3-203ENST00000375315 ANKRD24Q8TF21 1146 aa14.8□□□□□ -0.04
C9orf3-203ENST00000375315 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-203ENST00000375315 CDK12Q9NYV4 1490 aaPredicted RBP14.8□□□□□ -0.04
C9orf3-203ENST00000375315 KIF3AQ9Y496 699 aa14.8□□□□□ -0.04
C9orf3-203ENST00000375315 USP31Q70CQ4 1352 aa14.8□□□□□ -0.04
C9orf3-203ENST00000375315 NUCB2P80303 420 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 MVPQ14764 893 aaKnown RBP14.79□□□□□ -0.04
C9orf3-203ENST00000375315 CCDC27Q2M243 656 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 KCNH5Q8NCM2 988 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 FTSJ3Q8IY81 847 aaKnown RBP14.79□□□□□ -0.04
C9orf3-203ENST00000375315 C8orf58Q8NAV2 365 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 IP6K1Q92551 441 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 STRN4Q9NRL3 753 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 FMN2Q9NZ56 1722 aa14.79□□□□□ -0.04
C9orf3-203ENST00000375315 NPHP3Q7Z494 1330 aa14.78□□□□□ -0.04
C9orf3-203ENST00000375315 IQSEC2Q5JU85 1478 aa14.78□□□□□ -0.04
C9orf3-203ENST00000375315 LRSAM1Q6UWE0 723 aa14.78□□□□□ -0.04
C9orf3-203ENST00000375315 LMBRD1Q9NUN5 540 aa14.78□□□□□ -0.04
C9orf3-203ENST00000375315 CGNQ9P2M7 1197 aaKnown RBP14.78□□□□□ -0.04
C9orf3-203ENST00000375315 ANKRD26Q9UPS8 1709 aa14.78□□□□□ -0.04
C9orf3-203ENST00000375315 HDAC1Q13547 482 aaPredicted RBP14.77□□□□□ -0.04
C9orf3-203ENST00000375315 PDCL2Q8N4E4 241 aa14.77□□□□□ -0.04
C9orf3-203ENST00000375315 TOPAZ1Q8N9V7 1692 aa14.77□□□□□ -0.04
C9orf3-203ENST00000375315 GAS2L2Q8NHY3 880 aa14.77□□□□□ -0.04
C9orf3-203ENST00000375315 NOB1Q9ULX3 412 aaKnown RBP14.77□□□□□ -0.04
C9orf3-203ENST00000375315 MPRIPQ6WCQ1 1025 aa14.77□□□□□ -0.05
C9orf3-203ENST00000375315 PIK3C2AO00443 1686 aa14.77□□□□□ -0.05
C9orf3-203ENST00000375315 ZNF771Q7L3S4 317 aaPredicted RBP14.77□□□□□ -0.05
C9orf3-203ENST00000375315 ARHGEF25Q86VW2 580 aa14.77□□□□□ -0.05
C9orf3-203ENST00000375315 MST1RQ04912 1400 aa14.76□□□□□ -0.05
C9orf3-203ENST00000375315 TSC1Q92574 1164 aa14.76□□□□□ -0.05
C9orf3-203ENST00000375315 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
C9orf3-203ENST00000375315 VGLL3A8MV65 326 aa14.76□□□□□ -0.05
C9orf3-203ENST00000375315 GNAI1P63096 354 aa14.76□□□□□ -0.05
C9orf3-203ENST00000375315 TSPYL4Q9UJ04 414 aa14.76□□□□□ -0.05
C9orf3-203ENST00000375315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.76□□□□□ -0.05
C9orf3-203ENST00000375315 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 CD2BP2O95400 341 aaKnown RBP14.75□□□□□ -0.05
C9orf3-203ENST00000375315 TWISTNBQ3B726 338 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-203ENST00000375315 ITPRIPQ8IWB1 547 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 ZNF428Q96B54 188 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 STRCP1A6NGW2 1772 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 PEAK1Q9H792 1746 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 KIF2CQ99661 725 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 LGR6Q9HBX8 967 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 LMOD3Q0VAK6 560 aa14.75□□□□□ -0.05
C9orf3-203ENST00000375315 ZNF530Q6P9A1 599 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-203ENST00000375315 JARID2Q92833 1246 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-203ENST00000375315 ZNF830Q96NB3 372 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-203ENST00000375315 ZKSCAN2Q63HK3 967 aa14.74□□□□□ -0.05
C9orf3-203ENST00000375315 DZIP1LQ8IYY4 767 aaKnown RBP14.74□□□□□ -0.05
C9orf3-203ENST00000375315 PIBF1Q8WXW3 757 aa14.74□□□□□ -0.05
C9orf3-203ENST00000375315 IGSF1Q8N6C5 1336 aa14.73□□□□□ -0.05
C9orf3-203ENST00000375315 NOLC1Q14978 699 aaKnown RBP eCLIP14.73□□□□□ -0.05
C9orf3-203ENST00000375315 BCL2L12Q9HB09 334 aa14.73□□□□□ -0.05
C9orf3-203ENST00000375315 A0A0G2JS52 829 aa14.72□□□□□ -0.05
C9orf3-203ENST00000375315 NRKQ7Z2Y5 1582 aa14.72□□□□□ -0.05
C9orf3-203ENST00000375315 PRPF40AO75400 957 aaKnown RBP14.72□□□□□ -0.05
C9orf3-203ENST00000375315 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
C9orf3-203ENST00000375315 FEZ1Q99689 392 aa14.72□□□□□ -0.05
C9orf3-203ENST00000375315 RBM27Q9P2N5 1060 aaKnown RBP14.72□□□□□ -0.05
C9orf3-203ENST00000375315 SYCE3A1L190 88 aa14.72□□□□□ -0.05
C9orf3-203ENST00000375315 NUTM2BA6NNL0 878 aaPredicted RBP14.72□□□□□ -0.05
C9orf3-203ENST00000375315 GNAT3A8MTJ3 354 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms