RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 BEGAINQ9BUH8 593 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 DISP1Q96F81 1524 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 SUPT5HO00267 1087 aaKnown RBP3.66□□□□□ -1.82
CCDC7-204ENST00000375025 NBPF14Q5TI25 921 aa3.66□□□□□ -1.82
CCDC7-204ENST00000375025 WHAMMQ8TF30 809 aa3.66□□□□□ -1.82
CCDC7-204ENST00000375025 PER1O15534 1290 aaPredicted RBP3.66□□□□□ -1.82
CCDC7-204ENST00000375025 C9orf84Q5VXU9 1444 aa3.65□□□□□ -1.82
CCDC7-204ENST00000375025 EIF5BO60841 1220 aaKnown RBP3.65□□□□□ -1.82
CCDC7-204ENST00000375025 ITGA6P23229 1130 aa3.65□□□□□ -1.82
CCDC7-204ENST00000375025 FSHRP23945 695 aa3.65□□□□□ -1.82
CCDC7-204ENST00000375025 RIC3Q7Z5B4 369 aa3.65□□□□□ -1.82
CCDC7-204ENST00000375025 KRI1Q8N9T8 703 aaKnown RBP3.65□□□□□ -1.82
CCDC7-204ENST00000375025 CDV3Q9UKY7 258 aaKnown RBP3.65□□□□□ -1.82
CCDC7-204ENST00000375025 C3P01024 1663 aa3.65□□□□□ -1.82
CCDC7-204ENST00000375025 CDK13Q14004 1512 aaKnown RBP3.65□□□□□ -1.82
CCDC7-204ENST00000375025 DENND4BO75064 1496 aaPredicted RBP3.65□□□□□ -1.82
CCDC7-204ENST00000375025 VWDEQ8N2E2 1590 aa3.65□□□□□ -1.82
CCDC7-204ENST00000375025 FAM135BQ49AJ0 1406 aa3.65□□□□□ -1.83
CCDC7-204ENST00000375025 CCDC9Q9Y3X0 531 aaKnown RBP3.65□□□□□ -1.83
CCDC7-204ENST00000375025 CAMSAP1Q5T5Y3 1602 aa3.65□□□□□ -1.83
CCDC7-204ENST00000375025 SETD1AO15047 1707 aaKnown RBP3.65□□□□□ -1.83
CCDC7-204ENST00000375025 ZC3H4Q9UPT8 1303 aaKnown RBP3.65□□□□□ -1.83
CCDC7-204ENST00000375025 DEPDC5O75140 1603 aa3.65□□□□□ -1.83
CCDC7-204ENST00000375025 HMGB1P09429 215 aaKnown RBP3.64□□□□□ -1.83
CCDC7-204ENST00000375025 POTEAQ6S8J7 498 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 PARP9Q8IXQ6 854 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 SCARF2Q96GP6 870 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-204ENST00000375025 PGPEP1Q9NXJ5 209 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 MED14O60244 1454 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 ATP10AO60312 1499 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 LRRC7Q96NW7 1537 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 RAPGEF6Q8TEU7 1601 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 SENP3-EIF4A1A0A087X0R7 540 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 ITGB2P05107 769 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 SRSF11Q05519 484 aaKnown RBP3.64□□□□□ -1.83
CCDC7-204ENST00000375025 ARID5BQ14865 1188 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 ERFEQ4G0M1 354 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 SV2AQ7L0J3 742 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 SHANK2Q9UPX8 1470 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 KDM5CP41229 1560 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 IQGAP2Q13576 1575 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 PPP1R26Q5T8A7 1209 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-204ENST00000375025 PDXDC2PQ6P474 469 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 VASH1Q7L8A9 365 aaPredicted RBP3.64□□□□□ -1.83
CCDC7-204ENST00000375025 CABLES1Q8TDN4 633 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 LRRC4BQ9NT99 713 aa3.64□□□□□ -1.83
CCDC7-204ENST00000375025 UBTFP17480 764 aaKnown RBP3.63□□□□□ -1.83
CCDC7-204ENST00000375025 GAS6Q14393 721 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 GMCL1Q96IK5 515 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 DHX9Q08211 1270 aaKnown RBP3.63□□□□□ -1.83
CCDC7-204ENST00000375025 LYPD4Q6UWN0 246 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 SVOPQ8N4V2 548 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 RNF217Q8TC41 542 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 KRTAP4-8Q9BYQ9 185 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 LIMD1Q9UGP4 676 aa3.63□□□□□ -1.83
CCDC7-204ENST00000375025 FAM135AQ9P2D6 1515 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 ADAM23O75077 832 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 IRS1P35568 1242 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 TTLL12Q14166 644 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-204ENST00000375025 MYSM1Q5VVJ2 828 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 GPSM3Q9Y4H4 160 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 LRRC9Q6ZRR7 1453 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 TRIM66O15016 1216 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 CELA2BP08218 269 aaPredicted RBP3.62□□□□□ -1.83
CCDC7-204ENST00000375025 CBLBQ13191 982 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 VWA5B2Q8N398 1253 aa3.62□□□□□ -1.83
CCDC7-204ENST00000375025 POLR1AO95602 1720 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-204ENST00000375025 NEURL4Q96JN8 1562 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 KIF14Q15058 1648 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 ADAMTS2O95450 1211 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 FOXD4L5Q5VV16 416 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-204ENST00000375025 ZC3H15Q8WU90 426 aaKnown RBP3.61□□□□□ -1.83
CCDC7-204ENST00000375025 OCSTAMPQ9BR26 566 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 FGD6Q6ZV73 1430 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 RAPGEF3O95398 923 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 PROCP04070 461 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 CTSOP43234 321 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-204ENST00000375025 AGERQ15109 404 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 QPCTQ16769 361 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 GPAT2Q6NUI2 795 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 CCDC125Q86Z20 511 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 KDF1Q8NAX2 398 aaPredicted RBP3.61□□□□□ -1.83
CCDC7-204ENST00000375025 KDM5DQ9BY66 1539 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 NWD1Q149M9 1564 aa3.61□□□□□ -1.83
CCDC7-204ENST00000375025 ZBTB7CA1YPR0 619 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 MARSP56192 900 aaKnown RBP3.6□□□□□ -1.83
CCDC7-204ENST00000375025 INTS6LQ5JSJ4 861 aaKnown RBP3.6□□□□□ -1.83
CCDC7-204ENST00000375025 KCTD15Q96SI1 283 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-204ENST00000375025 MYO3AQ8NEV4 1616 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 CEP170BQ9Y4F5 1589 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-204ENST00000375025 SETBP1Q9Y6X0 1596 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 ESPNB1AK53 854 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 PLA2G4EQ3MJ16 856 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 HECW1Q76N89 1606 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 ZNF335Q9H4Z2 1342 aaPredicted RBP3.6□□□□□ -1.83
CCDC7-204ENST00000375025 ATP10BO94823 1461 aa3.6□□□□□ -1.83
CCDC7-204ENST00000375025 FIGNL2A6NMB9 653 aa3.59□□□□□ -1.83
CCDC7-204ENST00000375025 LILRA1O75019 489 aa3.59□□□□□ -1.83
CCDC7-204ENST00000375025 RTL5Q5HYW3 569 aaPredicted RBP3.59□□□□□ -1.83
CCDC7-204ENST00000375025 DCAF5Q96JK2 942 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms