RNA–Protein interactions for RNA: ENST00000374688.5

TMEM38B-201, Transcript of transmembrane protein 38B, humanhuman

TSL 2 BASIC

Gene TMEM38B, Length 3,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38B-201ENST00000374688 SYNRGQ9UMZ2 1314 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 RBM47A0AV96 593 aaKnown RBP4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 BICDL2A1A5D9 508 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 FSD2A1L4K1 749 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 NPHP1O15259 732 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 MECOMQ03112 1051 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 TUSC1Q2TAM9 212 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 CHCHD4Q8N4Q1 142 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 EMILIN3Q9NT22 766 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 CWC25Q9NXE8 425 aaPredicted RBP4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 DONSONQ9NYP3 566 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 POTEJP0CG39 1038 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 SLC26A8Q96RN1 970 aa4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.75□□□□□ -1.65
TMEM38B-201ENST00000374688 IGF1RP08069 1367 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 CD151P48509 253 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 RBM5P52756 815 aaKnown RBP eCLIP4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 PSME1Q06323 249 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 ZBED9Q6R2W3 1325 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 SENP7Q9BQF6 1050 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 RSPH14Q9UHP6 348 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 KIF16BQ96L93 1317 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 PPP4CP60510 307 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 TRIM29Q14134 588 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 TRERF1Q96PN7 1200 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 HIP1RO75146 1068 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 RRM1P23921 792 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 GABPB1Q06547 395 aaPredicted RBP4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 CCDC173Q0VFZ6 552 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 SMYD5Q6GMV2 418 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 UBE2Q1Q7Z7E8 422 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 DRC7Q8IY82 874 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 MICALL1Q8N3F8 863 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 SCYL1Q96KG9 808 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 AK7Q96M32 723 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 EPAS1Q99814 870 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 NOL10Q9BSC4 688 aaKnown RBP4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 BRMS1Q9HCU9 246 aa4.74□□□□□ -1.65
TMEM38B-201ENST00000374688 SEMA3EO15041 775 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 CD53P19397 219 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 SH3BGRP55822 239 aaPredicted RBP4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 CCDC73Q6ZRK6 1079 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 MPP4Q96JB8 637 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 TOMM22Q9NS69 142 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 GOLGA6L1Q8N7Z2 621 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 ZNF396Q96N95 335 aaPredicted RBP4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 LARP6Q9BRS8 491 aaKnown RBP4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 KLHL33A6NCF5 533 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 HOXB3P14651 431 aaPredicted RBP4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 CAPN2P17655 700 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 EVA1CP58658 441 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 IFT88Q13099 833 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 CHAF1AQ13111 956 aaPredicted RBP4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 LARGE2Q8N3Y3 721 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 KLHL23Q8NBE8 558 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 GIPC2Q8TF65 315 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 IRAK4Q9NWZ3 460 aa4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 ZCCHC6Q5VYS8 1495 aaKnown RBP4.73□□□□□ -1.65
TMEM38B-201ENST00000374688 SHTN1A0MZ66 631 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 PPP1R15AO75807 674 aaPredicted RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 RFX1P22670 979 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 INF2Q27J81 1249 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 CCDC174Q6PII3 467 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 PDCL2Q8N4E4 241 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 FMNL2Q96PY5 1086 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 SEZ6LQ9BYH1 1024 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 HDAC9Q9UKV0 1011 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 NOL7Q9UMY1 257 aaKnown RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 TULP2O00295 520 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 IGHDP01880 384 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 FOSL1P15407 271 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 OSBPP22059 807 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 TBC1D10BQ4KMP7 808 aaPredicted RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 GJC2Q5T442 439 aaPredicted RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 LARP1BQ659C4 914 aaKnown RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 BCL2L13Q9BXK5 485 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 RASSF4Q9H2L5 321 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 TMX1Q9H3N1 280 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 UTP6Q9NYH9 597 aaKnown RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 COLQQ9Y215 455 aaPredicted RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 XBP1P17861 261 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 TBX4P57082 545 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 DSG2Q14126 1118 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 ATP2B3Q16720 1220 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 FMNL3Q8IVF7 1028 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 IQCF2Q8IXL9 164 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 ATRIPQ8WXE1 791 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 KIF2CQ99661 725 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 DEF6Q9H4E7 631 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 S100BP04271 92 aaPredicted RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 ZNF16P17020 682 aaPredicted RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 ZNF394Q53GI3 561 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 KLHL10Q6JEL2 608 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 DZIP3Q86Y13 1208 aaKnown RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 SPACA7Q96KW9 195 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 C8orf37Q96NL8 207 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 IFT122Q9HBG6 1241 aa4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 MKRN1Q9UHC7 482 aaKnown RBP4.72□□□□□ -1.65
TMEM38B-201ENST00000374688 NINLQ9Y2I6 1382 aa4.71□□□□□ -1.65
TMEM38B-201ENST00000374688 XPCQ01831 940 aaPredicted RBP4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms