RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 DISP2A7MBM2 1401 aa12.49□□□□□ -0.41
PTPN20-202ENST00000374339 SOS1Q07889 1333 aaPredicted RBP12.49□□□□□ -0.41
PTPN20-202ENST00000374339 RARSP54136 660 aaKnown RBP12.49□□□□□ -0.41
PTPN20-202ENST00000374339 FKBP8Q14318 412 aa12.49□□□□□ -0.41
PTPN20-202ENST00000374339 MEX3CQ5U5Q3 659 aaKnown RBP12.49□□□□□ -0.41
PTPN20-202ENST00000374339 MPRIPQ6WCQ1 1025 aa12.49□□□□□ -0.41
PTPN20-202ENST00000374339 CHRDL2Q6WN34 429 aa12.49□□□□□ -0.41
PTPN20-202ENST00000374339 UNC5CLQ8IV45 518 aa12.49□□□□□ -0.41
PTPN20-202ENST00000374339 SPATA31A1Q5TZJ5 1347 aa12.48□□□□□ -0.41
PTPN20-202ENST00000374339 ALDH1L2Q3SY69 923 aa12.48□□□□□ -0.41
PTPN20-202ENST00000374339 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-202ENST00000374339 LGR6Q9HBX8 967 aa12.48□□□□□ -0.41
PTPN20-202ENST00000374339 ZBTB12Q9Y330 459 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-202ENST00000374339 MRC1P22897 1456 aa12.48□□□□□ -0.41
PTPN20-202ENST00000374339 SPATA31A5Q5VU36 1347 aa12.47□□□□□ -0.41
PTPN20-202ENST00000374339 SPATA31A7Q8IWB4 1347 aa12.47□□□□□ -0.41
PTPN20-202ENST00000374339 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
PTPN20-202ENST00000374339 CYP27B1O15528 508 aa12.47□□□□□ -0.41
PTPN20-202ENST00000374339 TWISTNBQ3B726 338 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-202ENST00000374339 CHMP4AQ9BY43 222 aa12.47□□□□□ -0.41
PTPN20-202ENST00000374339 KDM6AO15550 1401 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-202ENST00000374339 CANXP27824 592 aaKnown RBP12.46□□□□□ -0.41
PTPN20-202ENST00000374339 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
PTPN20-202ENST00000374339 VPS72Q15906 364 aa12.46□□□□□ -0.41
PTPN20-202ENST00000374339 BARGINQ6ZT62 677 aa12.46□□□□□ -0.41
PTPN20-202ENST00000374339 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
PTPN20-202ENST00000374339 TNS2Q63HR2 1409 aa12.46□□□□□ -0.41
PTPN20-202ENST00000374339 KIF16BQ96L93 1317 aa12.46□□□□□ -0.42
PTPN20-202ENST00000374339 BTBD11A6QL63 1104 aa12.45□□□□□ -0.42
PTPN20-202ENST00000374339 VAMP4O75379 141 aa12.45□□□□□ -0.42
PTPN20-202ENST00000374339 BCAR3O75815 825 aa12.45□□□□□ -0.42
PTPN20-202ENST00000374339 SLC52A2Q9HAB3 445 aa12.45□□□□□ -0.42
PTPN20-202ENST00000374339 SMC4Q9NTJ3 1288 aa12.45□□□□□ -0.42
PTPN20-202ENST00000374339 USP21Q9UK80 565 aa12.45□□□□□ -0.42
PTPN20-202ENST00000374339 ATF5Q9Y2D1 282 aaPredicted RBP12.45□□□□□ -0.42
PTPN20-202ENST00000374339 ERVV-2B6SEH9 535 aa12.44□□□□□ -0.42
PTPN20-202ENST00000374339 EXOC5O00471 708 aa12.44□□□□□ -0.42
PTPN20-202ENST00000374339 MS4A1P11836 297 aa12.44□□□□□ -0.42
PTPN20-202ENST00000374339 C8orf58Q8NAV2 365 aa12.44□□□□□ -0.42
PTPN20-202ENST00000374339 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
PTPN20-202ENST00000374339 IPO8O15397 1037 aaKnown RBP12.43□□□□□ -0.42
PTPN20-202ENST00000374339 HOXB7P09629 217 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 BRPF1P55201 1214 aaPredicted RBP12.43□□□□□ -0.42
PTPN20-202ENST00000374339 CABP4P57796 275 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 IRX6P78412 446 aaPredicted RBP12.43□□□□□ -0.42
PTPN20-202ENST00000374339 TSPYL6Q8N831 410 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 DDX54Q8TDD1 881 aaKnown RBP12.43□□□□□ -0.42
PTPN20-202ENST00000374339 SSH1Q8WYL5 1049 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
PTPN20-202ENST00000374339 PLIN1O60240 522 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 DDB1Q16531 1140 aa12.43□□□□□ -0.42
PTPN20-202ENST00000374339 CACNA1FO60840 1977 aa12.42□□□□□ -0.42
PTPN20-202ENST00000374339 EIF4A1P60842 406 aaKnown RBP12.42□□□□□ -0.42
PTPN20-202ENST00000374339 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
PTPN20-202ENST00000374339 NFATC2IPQ8NCF5 419 aa12.42□□□□□ -0.42
PTPN20-202ENST00000374339 FRAT1Q92837 279 aaPredicted RBP12.42□□□□□ -0.42
PTPN20-202ENST00000374339 BCL2L13Q9BXK5 485 aa12.42□□□□□ -0.42
PTPN20-202ENST00000374339 AFF2P51816 1311 aa12.41□□□□□ -0.42
PTPN20-202ENST00000374339 TTC5Q8N0Z6 440 aa12.41□□□□□ -0.42
PTPN20-202ENST00000374339 TOGARAM1Q9Y4F4 1720 aa12.41□□□□□ -0.42
PTPN20-202ENST00000374339 CCDC30Q5VVM6 783 aa12.4□□□□□ -0.42
PTPN20-202ENST00000374339 ZNF790Q6PG37 636 aa12.4□□□□□ -0.42
PTPN20-202ENST00000374339 ARHGAP45Q92619 1136 aa12.4□□□□□ -0.42
PTPN20-202ENST00000374339 STK31Q9BXU1 1019 aa12.4□□□□□ -0.42
PTPN20-202ENST00000374339 PAPPAQ13219 1627 aa12.4□□□□□ -0.42
PTPN20-202ENST00000374339 UBR2Q8IWV8 1755 aa12.39□□□□□ -0.43
PTPN20-202ENST00000374339 KRT24Q2M2I5 525 aa12.39□□□□□ -0.43
PTPN20-202ENST00000374339 MRPL50Q8N5N7 158 aaKnown RBP12.39□□□□□ -0.43
PTPN20-202ENST00000374339 PPP4R2Q9NY27 417 aa12.39□□□□□ -0.43
PTPN20-202ENST00000374339 TRPC5Q9UL62 973 aaPredicted RBP12.39□□□□□ -0.43
PTPN20-202ENST00000374339 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
PTPN20-202ENST00000374339 ATRNO75882 1429 aa12.39□□□□□ -0.43
PTPN20-202ENST00000374339 ITGB4P16144 1822 aa12.39□□□□□ -0.43
PTPN20-202ENST00000374339 HEG1Q9ULI3 1381 aa12.38□□□□□ -0.43
PTPN20-202ENST00000374339 FAM98CQ17RN3 349 aaKnown RBP12.38□□□□□ -0.43
PTPN20-202ENST00000374339 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
PTPN20-202ENST00000374339 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
PTPN20-202ENST00000374339 FBXO41Q8TF61 875 aa12.38□□□□□ -0.43
PTPN20-202ENST00000374339 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
PTPN20-202ENST00000374339 NOB1Q9ULX3 412 aaKnown RBP12.38□□□□□ -0.43
PTPN20-202ENST00000374339 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
PTPN20-202ENST00000374339 GLI3P10071 1580 aa12.37□□□□□ -0.43
PTPN20-202ENST00000374339 AAMPQ13685 434 aa12.37□□□□□ -0.43
PTPN20-202ENST00000374339 HDGFL1Q5TGJ6 251 aa12.37□□□□□ -0.43
PTPN20-202ENST00000374339 DZIP1LQ8IYY4 767 aaKnown RBP12.37□□□□□ -0.43
PTPN20-202ENST00000374339 GJD4Q96KN9 370 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-202ENST00000374339 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
PTPN20-202ENST00000374339 PTPRCP08575 1304 aa12.37□□□□□ -0.43
PTPN20-202ENST00000374339 LAMB4A4D0S4 1761 aa12.36□□□□□ -0.43
PTPN20-202ENST00000374339 GIGYF1O75420 1035 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-202ENST00000374339 TRIM27P14373 513 aa12.36□□□□□ -0.43
PTPN20-202ENST00000374339 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
PTPN20-202ENST00000374339 API5Q9BZZ5 524 aaKnown RBP12.36□□□□□ -0.43
PTPN20-202ENST00000374339 A0A0G2JS52 829 aa12.35□□□□□ -0.43
PTPN20-202ENST00000374339 KCNQ3O43525 872 aa12.35□□□□□ -0.43
PTPN20-202ENST00000374339 SNRPA1P09661 255 aaKnown RBP12.35□□□□□ -0.43
PTPN20-202ENST00000374339 MYT1Q01538 1121 aa12.35□□□□□ -0.43
PTPN20-202ENST00000374339 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
PTPN20-202ENST00000374339 EXOC6Q8TAG9 804 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms