RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 RUNDC1Q96C34 613 aa21.12■□□□□ 0.97
HDHD3-202ENST00000374180 SCN11AQ9UI33 1791 aa21.11■□□□□ 0.97
HDHD3-202ENST00000374180 R3HDM1Q15032 1099 aaKnown RBP21.1■□□□□ 0.97
HDHD3-202ENST00000374180 MCM10Q7L590 875 aa21.1■□□□□ 0.97
HDHD3-202ENST00000374180 PNISRQ8TF01 805 aaKnown RBP21.1■□□□□ 0.97
HDHD3-202ENST00000374180 LOC102724428A0A0B4J2F2 783 aa21.09■□□□□ 0.97
HDHD3-202ENST00000374180 SIK1P57059 783 aa21.09■□□□□ 0.97
HDHD3-202ENST00000374180 NUP188Q5SRE5 1749 aa21.08■□□□□ 0.97
HDHD3-202ENST00000374180 PSDA5PKW4 1024 aaPredicted RBP21.08■□□□□ 0.97
HDHD3-202ENST00000374180 HMGB2P26583 209 aaKnown RBP21.08■□□□□ 0.97
HDHD3-202ENST00000374180 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.97
HDHD3-202ENST00000374180 DCTN1Q14203 1278 aa21.08■□□□□ 0.97
HDHD3-202ENST00000374180 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.97
HDHD3-202ENST00000374180 STK32BQ9NY57 414 aa21.08■□□□□ 0.97
HDHD3-202ENST00000374180 CEMIPQ8WUJ3 1361 aa21.08■□□□□ 0.97
HDHD3-202ENST00000374180 RIPK4P57078 832 aa21.07■□□□□ 0.96
HDHD3-202ENST00000374180 DIEXFQ68CQ4 756 aaKnown RBP21.07■□□□□ 0.96
HDHD3-202ENST00000374180 ANO8Q9HCE9 1232 aaPredicted RBP21.07■□□□□ 0.96
HDHD3-202ENST00000374180 PTCD1O75127 700 aaKnown RBP21.07■□□□□ 0.96
HDHD3-202ENST00000374180 SLC15A2Q16348 729 aa21.07■□□□□ 0.96
HDHD3-202ENST00000374180 LY75O60449 1722 aa21.06■□□□□ 0.96
HDHD3-202ENST00000374180 ADAMTS7Q9UKP4 1686 aa21.06■□□□□ 0.96
HDHD3-202ENST00000374180 ATP6V1AP38606 617 aa21.06■□□□□ 0.96
HDHD3-202ENST00000374180 SLC39A6Q13433 755 aa21.06■□□□□ 0.96
HDHD3-202ENST00000374180 MRC1P22897 1456 aa21.06■□□□□ 0.96
HDHD3-202ENST00000374180 NEUROD2Q15784 382 aa21.05■□□□□ 0.96
HDHD3-202ENST00000374180 RRP7AQ9Y3A4 280 aaKnown RBP21.05■□□□□ 0.96
HDHD3-202ENST00000374180 BTBD11A6QL63 1104 aa21.03■□□□□ 0.96
HDHD3-202ENST00000374180 LMOD3Q0VAK6 560 aa21.03■□□□□ 0.96
HDHD3-202ENST00000374180 TTC5Q8N0Z6 440 aa21.03■□□□□ 0.96
HDHD3-202ENST00000374180 VIRMAQ69YN4 1812 aaKnown RBP21.03■□□□□ 0.96
HDHD3-202ENST00000374180 ZNF827Q17R98 1081 aa21.02■□□□□ 0.96
HDHD3-202ENST00000374180 AKT1S1Q96B36 256 aa21.02■□□□□ 0.96
HDHD3-202ENST00000374180 SLC4A9Q96Q91 983 aa21.02■□□□□ 0.96
HDHD3-202ENST00000374180 APAF1O14727 1248 aa21.01■□□□□ 0.95
HDHD3-202ENST00000374180 ITPK1Q13572 414 aa21.01■□□□□ 0.95
HDHD3-202ENST00000374180 TAF7Q15545 349 aaPredicted RBP21.01■□□□□ 0.95
HDHD3-202ENST00000374180 ZNF790Q6PG37 636 aa21.01■□□□□ 0.95
HDHD3-202ENST00000374180 TFCP2L1Q9NZI6 479 aa21.01■□□□□ 0.95
HDHD3-202ENST00000374180 SRCAPQ6ZRS2 3230 aa21.01■□□□□ 0.95
HDHD3-202ENST00000374180 FAM9BQ8IZU0 186 aa21.01■□□□□ 0.95
HDHD3-202ENST00000374180 THUMPD2Q9BTF0 503 aaKnown RBP21.01■□□□□ 0.95
HDHD3-202ENST00000374180 LINC00116Q8NCU8 138 aa21■□□□□ 0.95
HDHD3-202ENST00000374180 DLG5Q8TDM6 1919 aa20.99■□□□□ 0.95
HDHD3-202ENST00000374180 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
HDHD3-202ENST00000374180 AK7Q96M32 723 aa20.98■□□□□ 0.95
HDHD3-202ENST00000374180 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
HDHD3-202ENST00000374180 MIS18AQ9NYP9 233 aa20.97■□□□□ 0.95
HDHD3-202ENST00000374180 TRIM35Q9UPQ4 493 aa20.97■□□□□ 0.95
HDHD3-202ENST00000374180 KCNQ3O43525 872 aa20.96■□□□□ 0.95
HDHD3-202ENST00000374180 VSIG10Q8N0Z9 540 aa20.96■□□□□ 0.95
HDHD3-202ENST00000374180 ZNF496Q96IT1 587 aaPredicted RBP20.96■□□□□ 0.95
HDHD3-202ENST00000374180 FMNL2Q96PY5 1086 aa20.95■□□□□ 0.94
HDHD3-202ENST00000374180 SIPA1L3O60292 1781 aaPredicted RBP20.95■□□□□ 0.94
HDHD3-202ENST00000374180 DNAJC10Q8IXB1 793 aa20.94■□□□□ 0.94
HDHD3-202ENST00000374180 PDGFDQ9GZP0 370 aaPredicted RBP20.94■□□□□ 0.94
HDHD3-202ENST00000374180 C5P01031 1676 aa20.94■□□□□ 0.94
HDHD3-202ENST00000374180 KCPQ6ZWJ8 1503 aa20.94■□□□□ 0.94
HDHD3-202ENST00000374180 RC3H1Q5TC82 1133 aaKnown RBP20.94■□□□□ 0.94
HDHD3-202ENST00000374180 TAF1LQ8IZX4 1826 aa20.93■□□□□ 0.94
HDHD3-202ENST00000374180 PNPLA7Q6ZV29 1317 aa20.93■□□□□ 0.94
HDHD3-202ENST00000374180 MIER1Q8N108 512 aa20.93■□□□□ 0.94
HDHD3-202ENST00000374180 HEG1Q9ULI3 1381 aa20.92■□□□□ 0.94
HDHD3-202ENST00000374180 SENP3-EIF4A1A0A087X0R7 540 aa20.92■□□□□ 0.94
HDHD3-202ENST00000374180 GNPATO15228 680 aa20.92■□□□□ 0.94
HDHD3-202ENST00000374180 FLAD1Q8NFF5 587 aa20.92■□□□□ 0.94
HDHD3-202ENST00000374180 TEX13AQ9BXU3 409 aaPredicted RBP20.92■□□□□ 0.94
HDHD3-202ENST00000374180 C4BP0C0L5 1744 aa20.92■□□□□ 0.94
HDHD3-202ENST00000374180 ZNF831Q5JPB2 1677 aa20.92■□□□□ 0.94
HDHD3-202ENST00000374180 CNTNAP4Q9C0A0 1308 aa20.91■□□□□ 0.94
HDHD3-202ENST00000374180 MSH5O43196 834 aa20.91■□□□□ 0.94
HDHD3-202ENST00000374180 CRKLP46109 303 aaKnown RBP20.91■□□□□ 0.94
HDHD3-202ENST00000374180 TSPYL4Q9UJ04 414 aa20.91■□□□□ 0.94
HDHD3-202ENST00000374180 STARD3NLO95772 234 aa20.9■□□□□ 0.94
HDHD3-202ENST00000374180 CYP19A1P11511 503 aaPredicted RBP20.9■□□□□ 0.94
HDHD3-202ENST00000374180 BABAM1Q9NWV8 329 aa20.9■□□□□ 0.94
HDHD3-202ENST00000374180 RTCBQ9Y3I0 505 aaKnown RBP20.9■□□□□ 0.94
HDHD3-202ENST00000374180 PHF14O94880 888 aa20.89■□□□□ 0.94
HDHD3-202ENST00000374180 COL23A1Q86Y22 540 aaPredicted RBP20.89■□□□□ 0.94
HDHD3-202ENST00000374180 LAS1LQ9Y4W2 734 aaKnown RBP20.89■□□□□ 0.94
HDHD3-202ENST00000374180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.88■□□□□ 0.93
HDHD3-202ENST00000374180 RPS6KA4O75676 772 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 ZBTB7AO95365 584 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 SNRPA1P09661 255 aaKnown RBP20.88■□□□□ 0.93
HDHD3-202ENST00000374180 SSFA2P28290 1259 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 CALD1Q05682 793 aaKnown RBP20.88■□□□□ 0.93
HDHD3-202ENST00000374180 SMIM5Q71RC9 77 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 AMIGO3Q86WK7 504 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 UBR2Q8IWV8 1755 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 INTS5Q6P9B9 1019 aaKnown RBP20.88■□□□□ 0.93
HDHD3-202ENST00000374180 SLC16A10Q8TF71 515 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 CCDC87Q9NVE4 849 aa20.88■□□□□ 0.93
HDHD3-202ENST00000374180 CHL1O00533 1208 aa20.87■□□□□ 0.93
HDHD3-202ENST00000374180 EIF4A1P60842 406 aaKnown RBP20.87■□□□□ 0.93
HDHD3-202ENST00000374180 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
HDHD3-202ENST00000374180 SPON1Q9HCB6 807 aa20.87■□□□□ 0.93
HDHD3-202ENST00000374180 NCBP3Q53F19 620 aaKnown RBP20.86■□□□□ 0.93
HDHD3-202ENST00000374180 TRAPPC3LQ5T215 181 aa20.86■□□□□ 0.93
HDHD3-202ENST00000374180 MTFR1LQ9H019 292 aa20.86■□□□□ 0.93
HDHD3-202ENST00000374180 ATF5Q9Y2D1 282 aaPredicted RBP20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms