RNA–Protein interactions for RNA: ENST00000373795.6

SRSF4-201, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SRSF4, Length 2,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-201ENST00000373795 KCNQ3O43525 872 aa25.15■■□□□ 1.62
SRSF4-201ENST00000373795 MEIS3Q99687 375 aa25.15■■□□□ 1.62
SRSF4-201ENST00000373795 SLKQ9H2G2 1235 aaPredicted RBP25.15■■□□□ 1.62
SRSF4-201ENST00000373795 AMOTQ4VCS5 1084 aa25.14■■□□□ 1.62
SRSF4-201ENST00000373795 GCC1Q96CN9 775 aa25.13■■□□□ 1.61
SRSF4-201ENST00000373795 PXDNQ92626 1479 aa25.13■■□□□ 1.61
SRSF4-201ENST00000373795 ZNF335Q9H4Z2 1342 aaPredicted RBP25.13■■□□□ 1.61
SRSF4-201ENST00000373795 NCAPD2Q15021 1401 aa25.13■■□□□ 1.61
SRSF4-201ENST00000373795 CHRNA2Q15822 529 aa25.12■■□□□ 1.61
SRSF4-201ENST00000373795 FLIIQ13045 1269 aa25.12■■□□□ 1.61
SRSF4-201ENST00000373795 TEFQ10587 303 aa25.11■■□□□ 1.61
SRSF4-201ENST00000373795 C1orf141Q5JVX7 400 aa25.11■■□□□ 1.61
SRSF4-201ENST00000373795 NLRP2Q9NX02 1062 aa25.11■■□□□ 1.61
SRSF4-201ENST00000373795 BRINP3Q76B58 766 aa25.11■■□□□ 1.61
SRSF4-201ENST00000373795 EIF4A1P60842 406 aaKnown RBP25.1■■□□□ 1.61
SRSF4-201ENST00000373795 FKBP5Q13451 457 aaPredicted RBP25.1■■□□□ 1.61
SRSF4-201ENST00000373795 BTBD11A6QL63 1104 aa25.1■■□□□ 1.61
SRSF4-201ENST00000373795 RNMTO43148 476 aaKnown RBP25.1■■□□□ 1.61
SRSF4-201ENST00000373795 SPATA31A3Q5VYP0 1347 aa25.1■■□□□ 1.61
SRSF4-201ENST00000373795 EIF2S2P20042 333 aaKnown RBP25.09■■□□□ 1.61
SRSF4-201ENST00000373795 HDGFL1Q5TGJ6 251 aa25.09■■□□□ 1.61
SRSF4-201ENST00000373795 TBC1D2Q9BYX2 928 aa25.09■■□□□ 1.61
SRSF4-201ENST00000373795 LMO7Q8WWI1 1683 aa25.09■■□□□ 1.61
SRSF4-201ENST00000373795 TNS3Q68CZ2 1445 aa25.08■■□□□ 1.61
SRSF4-201ENST00000373795 PHAXQ9H814 394 aaKnown RBP25.08■■□□□ 1.6
SRSF4-201ENST00000373795 CEP85Q6P2H3 762 aa25.07■■□□□ 1.6
SRSF4-201ENST00000373795 ANKRD44Q8N8A2 993 aa25.07■■□□□ 1.6
SRSF4-201ENST00000373795 FAM208AQ9UK61 1670 aaKnown RBP25.07■■□□□ 1.6
SRSF4-201ENST00000373795 ATP10DQ9P241 1426 aa25.06■■□□□ 1.6
SRSF4-201ENST00000373795 CCT4P50991 539 aaKnown RBP25.06■■□□□ 1.6
SRSF4-201ENST00000373795 ANTXR1Q9H6X2 564 aa25.06■■□□□ 1.6
SRSF4-201ENST00000373795 CSB-PGBD3P0DP91 1061 aa25.05■■□□□ 1.6
SRSF4-201ENST00000373795 DCTPP1Q9H773 170 aa25.05■■□□□ 1.6
SRSF4-201ENST00000373795 SLAIN2Q9P270 581 aa25.05■■□□□ 1.6
SRSF4-201ENST00000373795 CAMTA1Q9Y6Y1 1673 aa25.05■■□□□ 1.6
SRSF4-201ENST00000373795 SOS1Q07889 1333 aaPredicted RBP25.05■■□□□ 1.6
SRSF4-201ENST00000373795 MFAP1P55081 439 aaKnown RBP25.05■■□□□ 1.6
SRSF4-201ENST00000373795 RTN4Q9NQC3 1192 aaKnown RBP25.05■■□□□ 1.6
SRSF4-201ENST00000373795 BRPF3Q9ULD4 1205 aa25.05■■□□□ 1.6
SRSF4-201ENST00000373795 RPAP2Q8IXW5 612 aaPredicted RBP25.04■■□□□ 1.6
SRSF4-201ENST00000373795 RAPGEF4Q8WZA2 1011 aa25.04■■□□□ 1.6
SRSF4-201ENST00000373795 COL18A1P39060 1754 aa25.03■■□□□ 1.6
SRSF4-201ENST00000373795 CACNA1FO60840 1977 aa25.03■■□□□ 1.6
SRSF4-201ENST00000373795 KDM3BQ7LBC6 1761 aa25.03■■□□□ 1.6
SRSF4-201ENST00000373795 C22orf23Q9BZE7 217 aa25.02■■□□□ 1.6
SRSF4-201ENST00000373795 CHPF2Q9P2E5 772 aa25.01■■□□□ 1.59
SRSF4-201ENST00000373795 ANXA1P04083 346 aa25.01■■□□□ 1.59
SRSF4-201ENST00000373795 SPRYD3Q8NCJ5 442 aa25■■□□□ 1.59
SRSF4-201ENST00000373795 APBB1O00213 710 aa25■■□□□ 1.59
SRSF4-201ENST00000373795 C16orf71Q8IYS4 520 aaPredicted RBP25■■□□□ 1.59
SRSF4-201ENST00000373795 PRAMEF22A3QJZ6 481 aa24.98■■□□□ 1.59
SRSF4-201ENST00000373795 TATP17735 454 aaPredicted RBP24.98■■□□□ 1.59
SRSF4-201ENST00000373795 CRYBG1Q9Y4K1 1723 aa24.97■■□□□ 1.59
SRSF4-201ENST00000373795 MEGF6O75095 1541 aa24.96■■□□□ 1.59
SRSF4-201ENST00000373795 HOXB7P09629 217 aa24.96■■□□□ 1.59
SRSF4-201ENST00000373795 SMARCA5O60264 1052 aaPredicted RBP24.96■■□□□ 1.59
SRSF4-201ENST00000373795 GNAI2P04899 355 aa24.96■■□□□ 1.59
SRSF4-201ENST00000373795 GIGYF1O75420 1035 aaPredicted RBP24.95■■□□□ 1.58
SRSF4-201ENST00000373795 PHKG2P15735 406 aa24.95■■□□□ 1.58
SRSF4-201ENST00000373795 BMP2KLQ5H9B9 411 aa24.95■■□□□ 1.58
SRSF4-201ENST00000373795 SOS2Q07890 1332 aaPredicted RBP24.94■■□□□ 1.58
SRSF4-201ENST00000373795 SLC39A6Q13433 755 aa24.94■■□□□ 1.58
SRSF4-201ENST00000373795 PLEKHM2Q8IWE5 1019 aa24.94■■□□□ 1.58
SRSF4-201ENST00000373795 USP44Q9H0E7 712 aa24.94■■□□□ 1.58
SRSF4-201ENST00000373795 SPG7Q9UQ90 795 aa24.94■■□□□ 1.58
SRSF4-201ENST00000373795 NFATC2IPQ8NCF5 419 aa24.93■■□□□ 1.58
SRSF4-201ENST00000373795 OTUD7AQ8TE49 926 aaPredicted RBP24.93■■□□□ 1.58
SRSF4-201ENST00000373795 CPDO75976 1380 aa24.93■■□□□ 1.58
SRSF4-201ENST00000373795 OVOS2A0A0G2JMS6 1433 aa24.92■■□□□ 1.58
SRSF4-201ENST00000373795 PI4KAP2A4QPH2 592 aa24.92■■□□□ 1.58
SRSF4-201ENST00000373795 PI4KAP1Q8N8J0 262 aa24.92■■□□□ 1.58
SRSF4-201ENST00000373795 GNAI3P08754 354 aa24.91■■□□□ 1.58
SRSF4-201ENST00000373795 PROSER3Q2NL68 480 aa24.91■■□□□ 1.58
SRSF4-201ENST00000373795 PRDM11Q9NQV5 511 aa24.91■■□□□ 1.58
SRSF4-201ENST00000373795 KDM6AO15550 1401 aaPredicted RBP24.91■■□□□ 1.58
SRSF4-201ENST00000373795 SIPA1L3O60292 1781 aaPredicted RBP24.91■■□□□ 1.58
SRSF4-201ENST00000373795 HEG1Q9ULI3 1381 aa24.9■■□□□ 1.58
SRSF4-201ENST00000373795 PNMA6EA0A0J9YXQ4 647 aa24.9■■□□□ 1.58
SRSF4-201ENST00000373795 CYP27B1O15528 508 aa24.9■■□□□ 1.58
SRSF4-201ENST00000373795 IFNL2Q8IZJ0 200 aa24.9■■□□□ 1.58
SRSF4-201ENST00000373795 LRRFIP2Q9Y608 721 aaKnown RBP24.9■■□□□ 1.58
SRSF4-201ENST00000373795 HMMRO75330 724 aa24.9■■□□□ 1.58
SRSF4-201ENST00000373795 SLC52A2Q9HAB3 445 aa24.9■■□□□ 1.58
SRSF4-201ENST00000373795 DBF4Q9UBU7 674 aaPredicted RBP24.89■■□□□ 1.58
SRSF4-201ENST00000373795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.89■■□□□ 1.576e-7■■□□□ 12
SRSF4-201ENST00000373795 GSPT1P15170 499 aaKnown RBP24.88■■□□□ 1.57
SRSF4-201ENST00000373795 ZNF790Q6PG37 636 aa24.88■■□□□ 1.57
SRSF4-201ENST00000373795 EXOC6BQ9Y2D4 811 aa24.88■■□□□ 1.57
SRSF4-201ENST00000373795 ADAMTS7Q9UKP4 1686 aa24.88■■□□□ 1.57
SRSF4-201ENST00000373795 SRCIN1Q9C0H9 1055 aa24.88■■□□□ 1.57
SRSF4-201ENST00000373795 DNAAF4Q8WXU2 420 aa24.87■■□□□ 1.57
SRSF4-201ENST00000373795 ATP8B2P98198 1209 aa24.87■■□□□ 1.57
SRSF4-201ENST00000373795 CHMP4AQ9BY43 222 aa24.87■■□□□ 1.57
SRSF4-201ENST00000373795 SCN11AQ9UI33 1791 aa24.86■■□□□ 1.57
SRSF4-201ENST00000373795 UBTFL1P0CB47 393 aaPredicted RBP24.86■■□□□ 1.57
SRSF4-201ENST00000373795 BEND3Q5T5X7 828 aa24.86■■□□□ 1.57
SRSF4-201ENST00000373795 TOM1L2Q6ZVM7 507 aa24.86■■□□□ 1.57
SRSF4-201ENST00000373795 PXDNLA1KZ92 1463 aa24.85■■□□□ 1.57
SRSF4-201ENST00000373795 ADCY9O60503 1353 aa24.85■■□□□ 1.57
SRSF4-201ENST00000373795 NBPF7P0C2Y1 421 aaPredicted RBP24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms